RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 TPPP2P59282 170 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 SSBP2P81877 361 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-208ENST00000392449 PJVKQ0ZLH3 352 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 TRAM1Q15629 374 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 CD200R1LQ6Q8B3 271 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 PRSS48Q7RTY5 328 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 OR56B1Q8NGI3 324 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 C5orf30Q96GV9 206 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 ZNF230Q9UIE0 474 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-208ENST00000392449 MGAT4AQ9UM21 535 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 A0A075B6Q4 140 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 TFAP2AP05549 437 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 PSMA1P25786 263 aaKnown RBP12.78□□□□□ -0.36
PTPRK-208ENST00000392449 INSL3P51460 131 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 DEFA5Q01523 94 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 ZNF562Q6V9R5 426 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 ZNF429Q86V71 674 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 TCTEX1D1Q8N7M0 179 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 CNBD2Q96M20 576 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 OR2D2Q9H210 308 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 GHITMQ9H3K2 345 aa12.78□□□□□ -0.36
PTPRK-208ENST00000392449 SMIM30A4D0T7 59 aa12.77□□□□□ -0.37
PTPRK-208ENST00000392449 FABP7O15540 132 aa12.77□□□□□ -0.37
PTPRK-208ENST00000392449 FCGR3AP08637 254 aa12.77□□□□□ -0.37
PTPRK-208ENST00000392449 OR8U9P0C7N5 309 aa12.77□□□□□ -0.37
PTPRK-208ENST00000392449 GSTT2P0CG29 244 aa12.77□□□□□ -0.37
PTPRK-208ENST00000392449 GSTT2BP0CG30 244 aa12.77□□□□□ -0.37
PTPRK-208ENST00000392449 GNB3P16520 340 aa12.77□□□□□ -0.37
PTPRK-208ENST00000392449 TMEM267Q0VDI3 215 aaPredicted RBP12.77□□□□□ -0.37
PTPRK-208ENST00000392449 FXYD3Q14802 87 aa12.77□□□□□ -0.37
PTPRK-208ENST00000392449 AKIRIN2Q53H80 203 aa12.77□□□□□ -0.37
PTPRK-208ENST00000392449 OVCH2Q7RTZ1 564 aa12.77□□□□□ -0.37
PTPRK-208ENST00000392449 RAB3CQ96E17 227 aa12.77□□□□□ -0.37
PTPRK-208ENST00000392449 TSNAXQ99598 290 aaKnown RBP12.77□□□□□ -0.37
PTPRK-208ENST00000392449 RNF5Q99942 180 aa12.77□□□□□ -0.37
PTPRK-208ENST00000392449 ACOT13Q9NPJ3 140 aa12.77□□□□□ -0.37
PTPRK-208ENST00000392449 SLC35D1Q9NTN3 355 aa12.77□□□□□ -0.37
PTPRK-208ENST00000392449 SMAD5-AS1Q9Y6J3 95 aa12.77□□□□□ -0.37
PTPRK-208ENST00000392449 IGLV2-23P01705 113 aa12.76□□□□□ -0.37
PTPRK-208ENST00000392449 APOA2P02652 100 aa12.76□□□□□ -0.37
PTPRK-208ENST00000392449 TRGV3P03979 118 aa12.76□□□□□ -0.37
PTPRK-208ENST00000392449 ACSM6Q6P461 480 aa12.76□□□□□ -0.37
PTPRK-208ENST00000392449 IZUMO2Q6UXV1 221 aa12.76□□□□□ -0.37
PTPRK-208ENST00000392449 PDPNQ86YL7 162 aa12.76□□□□□ -0.37
PTPRK-208ENST00000392449 SBSPONQ8IVN8 264 aa12.76□□□□□ -0.37
PTPRK-208ENST00000392449 OR5T1Q8NG75 326 aa12.76□□□□□ -0.37
PTPRK-208ENST00000392449 OR4A4PQ8NGN8 299 aa12.76□□□□□ -0.37
PTPRK-208ENST00000392449 FLYWCH2Q96CP2 140 aaKnown RBP12.76□□□□□ -0.37
PTPRK-208ENST00000392449 ZNF355PQ9NSJ1 428 aa12.76□□□□□ -0.37
PTPRK-208ENST00000392449 SDHAF2Q9NX18 166 aa12.76□□□□□ -0.37
PTPRK-208ENST00000392449 ELF5Q9UKW6 265 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-208ENST00000392449 RAB22AQ9UL26 194 aa12.76□□□□□ -0.37
PTPRK-208ENST00000392449 SPDEFO95238 335 aa12.75□□□□□ -0.37
PTPRK-208ENST00000392449 TBCEQ15813 527 aaPredicted RBP12.75□□□□□ -0.37
PTPRK-208ENST00000392449 PYHIN1Q6K0P9 492 aa12.75□□□□□ -0.37
PTPRK-208ENST00000392449 NR2C2APQ86WQ0 139 aa12.75□□□□□ -0.37
PTPRK-208ENST00000392449 RHOVQ96L33 236 aa12.75□□□□□ -0.37
PTPRK-208ENST00000392449 CABLES2Q9BTV7 478 aa12.75□□□□□ -0.37
PTPRK-208ENST00000392449 IGKV1D-8A0A087WSZ0 117 aa12.74□□□□□ -0.37
PTPRK-208ENST00000392449 TRIM64CA6NLI5 447 aa12.74□□□□□ -0.37
PTPRK-208ENST00000392449 MFNGO00587 321 aa12.74□□□□□ -0.37
PTPRK-208ENST00000392449 HSPB1P04792 205 aaKnown RBP12.74□□□□□ -0.37
PTPRK-208ENST00000392449 APELAP0DMC3 54 aa12.74□□□□□ -0.37
PTPRK-208ENST00000392449 GP9P14770 177 aa12.74□□□□□ -0.37
PTPRK-208ENST00000392449 MRPS15P82914 257 aaKnown RBP12.74□□□□□ -0.37
PTPRK-208ENST00000392449 ZNF367Q7RTV3 350 aa12.74□□□□□ -0.37
PTPRK-208ENST00000392449 OR10R2Q8NGX6 335 aa12.74□□□□□ -0.37
PTPRK-208ENST00000392449 TRBV6-7A0A0A0MS04 114 aa12.73□□□□□ -0.37
PTPRK-208ENST00000392449 ANKRD34BA5PLL1 514 aa12.73□□□□□ -0.37
PTPRK-208ENST00000392449 IFITM5A6NNB3 132 aa12.73□□□□□ -0.37
PTPRK-208ENST00000392449 SRRM4A7MD48 611 aaKnown RBP12.73□□□□□ -0.37
PTPRK-208ENST00000392449 RAB27BO00194 218 aa12.73□□□□□ -0.37
PTPRK-208ENST00000392449 CNIH1O95406 144 aa12.73□□□□□ -0.37
PTPRK-208ENST00000392449 CRYGBP07316 175 aa12.73□□□□□ -0.37
PTPRK-208ENST00000392449 PITPNAQ00169 270 aa12.73□□□□□ -0.37
PTPRK-208ENST00000392449 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.73□□□□□ -0.37
PTPRK-208ENST00000392449 BVESQ8NE79 360 aa12.73□□□□□ -0.37
PTPRK-208ENST00000392449 OR10J5Q8NHC4 309 aa12.73□□□□□ -0.37
PTPRK-208ENST00000392449 HARBI1Q96MB7 349 aa12.73□□□□□ -0.37
PTPRK-208ENST00000392449 NDUFB11Q9NX14 153 aa12.73□□□□□ -0.37
PTPRK-208ENST00000392449 FRMD6-AS1P0C7T7 363 aa12.72□□□□□ -0.37
PTPRK-208ENST00000392449 HIST1H1DP16402 221 aaKnown RBP12.72□□□□□ -0.37
PTPRK-208ENST00000392449 SERPINB10P48595 397 aa12.72□□□□□ -0.37
PTPRK-208ENST00000392449 SRSF7Q16629 238 aaKnown RBP eCLIP12.72□□□□□ -0.37
PTPRK-208ENST00000392449 MRGPRG-AS1Q2M3A8 158 aa12.72□□□□□ -0.37
PTPRK-208ENST00000392449 C22orf42Q6IC83 251 aa12.72□□□□□ -0.37
PTPRK-208ENST00000392449 POC5Q8NA72 575 aa12.72□□□□□ -0.37
PTPRK-208ENST00000392449 SLA2Q9H6Q3 261 aa12.72□□□□□ -0.37
PTPRK-208ENST00000392449 ADAM30Q9UKF2 790 aa12.72□□□□□ -0.37
PTPRK-208ENST00000392449 DNAH7Q8WXX0 4024 aa12.72□□□□□ -0.37
PTPRK-208ENST00000392449 TRAV1-2A0A0B4J238 106 aa12.72□□□□□ -0.37
PTPRK-208ENST00000392449 J3QRK9 145 aa12.72□□□□□ -0.37
PTPRK-208ENST00000392449 PDCD5O14737 125 aa12.72□□□□□ -0.37
PTPRK-208ENST00000392449 RBMXL2O75526 392 aaKnown RBP12.72□□□□□ -0.37
PTPRK-208ENST00000392449 CD40LGP29965 261 aa12.72□□□□□ -0.37
PTPRK-208ENST00000392449 PSMD7P51665 324 aa12.72□□□□□ -0.37
PTPRK-208ENST00000392449 IDO2Q6ZQW0 420 aa12.72□□□□□ -0.37
PTPRK-208ENST00000392449 OR6Q1Q8NGQ2 317 aa12.72□□□□□ -0.37
PTPRK-208ENST00000392449 RSRP1Q9BUV0 290 aa12.72□□□□□ -0.37
PTPRK-208ENST00000392449 SHOXO15266 292 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms