RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 OR2W1Q9Y3N9 320 aa7.76□□□□□ -1.17
CD48-202ENST00000368046 M0R1X1 148 aa7.75□□□□□ -1.17
CD48-202ENST00000368046 RRHO14718 337 aa7.75□□□□□ -1.17
CD48-202ENST00000368046 SLC22A5O76082 557 aa7.75□□□□□ -1.17
CD48-202ENST00000368046 HLA-DQB1P01920 261 aa7.75□□□□□ -1.17
CD48-202ENST00000368046 APOA2P02652 100 aa7.75□□□□□ -1.17
CD48-202ENST00000368046 CBX5P45973 191 aa7.75□□□□□ -1.17
CD48-202ENST00000368046 LGALS7P47929 136 aa7.75□□□□□ -1.17
CD48-202ENST00000368046 RORCP51449 518 aa7.75□□□□□ -1.17
CD48-202ENST00000368046 LUMP51884 338 aaPredicted RBP7.75□□□□□ -1.17
CD48-202ENST00000368046 UBE2NLQ5JXB2 153 aa7.75□□□□□ -1.17
CD48-202ENST00000368046 HOGA1Q86XE5 327 aa7.75□□□□□ -1.17
CD48-202ENST00000368046 PDPNQ86YL7 162 aa7.75□□□□□ -1.17
CD48-202ENST00000368046 SAMD12Q8N8I0 201 aa7.75□□□□□ -1.17
CD48-202ENST00000368046 WFDC9Q8NEX5 89 aa7.75□□□□□ -1.17
CD48-202ENST00000368046 BEST4Q8NFU0 473 aa7.75□□□□□ -1.17
CD48-202ENST00000368046 ACOT12Q8WYK0 555 aa7.75□□□□□ -1.17
CD48-202ENST00000368046 FLYWCH2Q96CP2 140 aaKnown RBP7.75□□□□□ -1.17
CD48-202ENST00000368046 OR51J1Q9H342 316 aa7.75□□□□□ -1.17
CD48-202ENST00000368046 IGHV7-81A0A0B4J1V7 117 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 SMIM31A0A1B0GVY4 71 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 A0A1W2PRX2 142 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 J3QRK9 145 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 FCN1O00602 326 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 GABARAPO95166 117 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 IGKV1-16P04430 117 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 ELANEP08246 267 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 OR5H8P0DN80 308 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 RRASP10301 218 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 VDAC1P21796 283 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 NFYAP23511 347 aaPredicted RBP7.74□□□□□ -1.17
CD48-202ENST00000368046 PPIFP30405 207 aaKnown RBP7.74□□□□□ -1.17
CD48-202ENST00000368046 SLC6A1P30531 599 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 ALDH3B2P48448 385 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 THBS3P49746 956 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 CX3CL1P78423 397 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 PSG5Q15238 335 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 CTF1Q16619 201 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 GPR107Q5VW38 600 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 ZNF660Q6AZW8 331 aaPredicted RBP7.74□□□□□ -1.17
CD48-202ENST00000368046 ZNF562Q6V9R5 426 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 GVQW1Q8N7I0 195 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 ADTRPQ96IZ2 230 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 TSNAXQ99598 290 aaKnown RBP7.74□□□□□ -1.17
CD48-202ENST00000368046 NAA50Q9GZZ1 169 aaKnown RBP7.74□□□□□ -1.17
CD48-202ENST00000368046 FBXL15Q9H469 300 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 SLC35D1Q9NTN3 355 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 COMMD3Q9UBI1 195 aa7.74□□□□□ -1.17
CD48-202ENST00000368046 MEGF8Q7Z7M0 2845 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 TUSC2O75896 110 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 IGHG4P01861 327 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 APOA1P02647 267 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 PF4V1P10720 104 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 PTHLHP12272 177 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 DUTP33316 252 aaKnown RBP7.73□□□□□ -1.17
CD48-202ENST00000368046 PRSS3P35030 304 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 ARPC4P59998 168 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 RPL23AP62750 156 aaKnown RBP7.73□□□□□ -1.17
CD48-202ENST00000368046 CFHR3Q02985 330 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 TMEM267Q0VDI3 215 aaPredicted RBP7.73□□□□□ -1.17
CD48-202ENST00000368046 CBX3Q13185 183 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 FOXE3Q13461 319 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 PLGLAQ15195 96 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 TMEM177Q53S58 311 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 TMEM69Q5SWH9 247 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 MZT2AQ6P582 158 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 GPR141Q7Z602 305 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 ZNF645Q8N7E2 425 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 RNF152Q8N8N0 203 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 BVESQ8NE79 360 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 OR5AP2Q8NGF4 316 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 GIMAP1Q8WWP7 306 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 KRTAP4-7Q9BYR0 210 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 NECAP2Q9NVZ3 263 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 METTL1Q9UBP6 276 aaKnown RBP7.73□□□□□ -1.17
CD48-202ENST00000368046 NUBP2Q9Y5Y2 271 aa7.73□□□□□ -1.17
CD48-202ENST00000368046 TET2Q6N021 2002 aaPredicted RBP7.73□□□□□ -1.17
CD48-202ENST00000368046 LINC00473A8K010 186 aa7.72□□□□□ -1.17
CD48-202ENST00000368046 SPDEFO95238 335 aa7.72□□□□□ -1.17
CD48-202ENST00000368046 RPLP1P05386 114 aaKnown RBP7.72□□□□□ -1.17
CD48-202ENST00000368046 ZNF182P17025 639 aaPredicted RBP7.72□□□□□ -1.17
CD48-202ENST00000368046 CDX1P47902 265 aaPredicted RBP7.72□□□□□ -1.17
CD48-202ENST00000368046 TAS2R20P59543 309 aa7.72□□□□□ -1.17
CD48-202ENST00000368046 DEFA6Q01524 100 aa7.72□□□□□ -1.17
CD48-202ENST00000368046 RTL8BQ17RB0 113 aa7.72□□□□□ -1.17
CD48-202ENST00000368046 AKIRIN2Q53H80 203 aa7.72□□□□□ -1.17
CD48-202ENST00000368046 CXorf66Q5JRM2 361 aaPredicted RBP7.72□□□□□ -1.17
CD48-202ENST00000368046 KHDC1LQ5JSQ8 128 aa7.72□□□□□ -1.17
CD48-202ENST00000368046 PPP1R27Q86WC6 154 aa7.72□□□□□ -1.17
CD48-202ENST00000368046 ZNF695Q8IW36 515 aa7.72□□□□□ -1.17
CD48-202ENST00000368046 MINDY2Q8NBR6 621 aa7.72□□□□□ -1.17
CD48-202ENST00000368046 DDB2Q92466 427 aa7.72□□□□□ -1.17
CD48-202ENST00000368046 C5orf30Q96GV9 206 aa7.72□□□□□ -1.17
CD48-202ENST00000368046 CLCC1Q96S66 551 aa7.72□□□□□ -1.17
CD48-202ENST00000368046 PARP11Q9NR21 331 aa7.72□□□□□ -1.17
CD48-202ENST00000368046 MRPS7Q9Y2R9 242 aaKnown RBP7.72□□□□□ -1.17
CD48-202ENST00000368046 WSB1Q9Y6I7 421 aa7.72□□□□□ -1.17
CD48-202ENST00000368046 TRAV41A0A0B4J266 112 aa7.71□□□□□ -1.18
CD48-202ENST00000368046 IGKV1D-13A0A0B4J2D9 117 aa7.71□□□□□ -1.18
CD48-202ENST00000368046 SRRM4A7MD48 611 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms