RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 NKX6-3A6NJ46 265 aa17.27■□□□□ 0.35
YBX3-202ENST00000279550 ZNF705EA8MWA4 302 aaPredicted RBP17.27■□□□□ 0.35
YBX3-202ENST00000279550 CST7O76096 145 aa17.27■□□□□ 0.35
YBX3-202ENST00000279550 TLE4Q04727 773 aa17.27■□□□□ 0.35
YBX3-202ENST00000279550 CLINT1Q14677 625 aa17.27■□□□□ 0.35
YBX3-202ENST00000279550 RPL39P5Q59GN2 51 aa17.27■□□□□ 0.35
YBX3-202ENST00000279550 SP5Q6BEB4 398 aaPredicted RBP17.27■□□□□ 0.35
YBX3-202ENST00000279550 C1orf229Q6ZS94 237 aaPredicted RBP17.27■□□□□ 0.35
YBX3-202ENST00000279550 C1orf87Q8N0U7 546 aa17.27■□□□□ 0.35
YBX3-202ENST00000279550 HSD17B10Q99714 261 aaKnown RBP17.27■□□□□ 0.35
YBX3-202ENST00000279550 GINS3Q9BRX5 216 aa17.27■□□□□ 0.35
YBX3-202ENST00000279550 SLC25A31Q9H0C2 315 aa17.27■□□□□ 0.35
YBX3-202ENST00000279550 GFOD1Q9NXC2 390 aa17.27■□□□□ 0.35
YBX3-202ENST00000279550 DCHS2Q6V1P9 2916 aa17.26■□□□□ 0.35
YBX3-202ENST00000279550 SPTAN1Q13813 2472 aaKnown RBP17.26■□□□□ 0.35
YBX3-202ENST00000279550 TRAV38-1A0A0B4J264 116 aa17.26■□□□□ 0.35
YBX3-202ENST00000279550 A0A1W2PPE3 182 aa17.26■□□□□ 0.35
YBX3-202ENST00000279550 MMP23AO75900 390 aa17.26■□□□□ 0.35
YBX3-202ENST00000279550 KRASP01116 189 aa17.26■□□□□ 0.35
YBX3-202ENST00000279550 COX6B1P14854 86 aa17.26■□□□□ 0.35
YBX3-202ENST00000279550 SULT1A2P50226 295 aa17.26■□□□□ 0.35
YBX3-202ENST00000279550 PPIAL4EA0A075B759 164 aa17.25■□□□□ 0.35
YBX3-202ENST00000279550 PPIAL4DF5H284 164 aa17.25■□□□□ 0.35
YBX3-202ENST00000279550 H3BP45 60 aa17.25■□□□□ 0.35
YBX3-202ENST00000279550 TNFRSF13BO14836 293 aaPredicted RBP17.25■□□□□ 0.35
YBX3-202ENST00000279550 TMPRSS2O15393 492 aa17.25■□□□□ 0.35
YBX3-202ENST00000279550 PPIAL4FP0DN26 164 aa17.25■□□□□ 0.35
YBX3-202ENST00000279550 IAPPP10997 89 aa17.25■□□□□ 0.35
YBX3-202ENST00000279550 ZP3P21754 424 aa17.25■□□□□ 0.35
YBX3-202ENST00000279550 DUTP33316 252 aaKnown RBP17.25■□□□□ 0.35
YBX3-202ENST00000279550 DYNLT3P51808 116 aa17.25■□□□□ 0.35
YBX3-202ENST00000279550 EIF5AL1Q6IS14 154 aaKnown RBP17.25■□□□□ 0.35
YBX3-202ENST00000279550 LYPD2Q6UXB3 125 aa17.25■□□□□ 0.35
YBX3-202ENST00000279550 SH3BGRL3Q9H299 93 aa17.25■□□□□ 0.35
YBX3-202ENST00000279550 TAS2R3Q9NYW6 316 aa17.25■□□□□ 0.35
YBX3-202ENST00000279550 PPIAL4AQ9Y536 164 aa17.25■□□□□ 0.35
YBX3-202ENST00000279550 SESN1Q9Y6P5 492 aa17.25■□□□□ 0.35
YBX3-202ENST00000279550 M0R1X1 148 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 SHOXO15266 292 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 SYNGR2O43760 224 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 MED6O75586 246 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 NDUFB7P17568 137 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 MIDNQ504T8 468 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 CT45A1Q5HYN5 189 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 TCTEX1D1Q8N7M0 179 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 CT45A3Q8NHU0 189 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 CORO2AQ92828 525 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 SMIM8Q96KF7 97 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 FAM212BQ9NTI7 297 aaPredicted RBP17.24■□□□□ 0.35
YBX3-202ENST00000279550 IDI2-AS1Q9NZ38 188 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 RFNGQ9Y644 331 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 USF3Q68DE3 2245 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 ZNF729A6NN14 1252 aaPredicted RBP17.24■□□□□ 0.35
YBX3-202ENST00000279550 TMEM267Q0VDI3 215 aaPredicted RBP17.24■□□□□ 0.35
YBX3-202ENST00000279550 HFEQ30201 348 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 PRAMEF5Q5TYX0 476 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 CCDC28AQ8IWP9 274 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 HSD17B11Q8NBQ5 300 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 ZNF439Q8NDP4 499 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 MARC2Q969Z3 335 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 RAB40CQ96S21 281 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 LINC00574Q9H8X3 128 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 C19orf12Q9NSK7 152 aa17.24■□□□□ 0.35
YBX3-202ENST00000279550 SLC25A10Q9UBX3 287 aaPredicted RBP17.24■□□□□ 0.35
YBX3-202ENST00000279550 TXNL1O43396 289 aa17.23■□□□□ 0.35
YBX3-202ENST00000279550 NFYBP25208 207 aa17.23■□□□□ 0.35
YBX3-202ENST00000279550 PXDC1Q5TGL8 231 aa17.23■□□□□ 0.35
YBX3-202ENST00000279550 TMEM217Q8N7C4 229 aa17.23■□□□□ 0.35
YBX3-202ENST00000279550 OR5C1Q8NGR4 320 aa17.23■□□□□ 0.35
YBX3-202ENST00000279550 FAM216AQ8WUB2 273 aa17.23■□□□□ 0.35
YBX3-202ENST00000279550 NEU4Q8WWR8 484 aaPredicted RBP17.23■□□□□ 0.35
YBX3-202ENST00000279550 SAT2Q96F10 170 aaPredicted RBP17.23■□□□□ 0.35
YBX3-202ENST00000279550 ABHD14AQ9BUJ0 271 aa17.23■□□□□ 0.35
YBX3-202ENST00000279550 COA4Q9NYJ1 87 aa17.23■□□□□ 0.35
YBX3-202ENST00000279550 ITGB1BP1O14713 200 aa17.22■□□□□ 0.35
YBX3-202ENST00000279550 SCO1O75880 301 aa17.22■□□□□ 0.35
YBX3-202ENST00000279550 SPP1P10451 314 aa17.22■□□□□ 0.35
YBX3-202ENST00000279550 RPL23AP62750 156 aaKnown RBP17.22■□□□□ 0.35
YBX3-202ENST00000279550 ZNF273Q14593 569 aa17.22■□□□□ 0.35
YBX3-202ENST00000279550 STPG2Q8N412 459 aa17.22■□□□□ 0.35
YBX3-202ENST00000279550 LRRK2Q5S007 2527 aa17.22■□□□□ 0.35
YBX3-202ENST00000279550 TOR1AO14656 332 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 SEC11BP0C7V7 166 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 COL8A2P25067 703 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 CDKN1AP38936 164 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 ERVFRD-1P60508 538 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 BAXQ07812 192 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 BPIFCQ8NFQ6 507 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 RBKSQ9H477 322 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 RAB9BQ9NP90 201 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 CTSZQ9UBR2 303 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 LYNX1G3V0Z9 82 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 RAB29O14966 203 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 FCGR3BO75015 233 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 LYNX1P0DP58 116 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 TUSC1Q2TAM9 212 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 HAPLN4Q86UW8 402 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 PSENENQ9NZ42 101 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 LINC00312Q9Y6C7 94 aa17.21■□□□□ 0.35
YBX3-202ENST00000279550 hADV38S2A0JD32 116 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms