RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Vmn1r126L7N2C8 321 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Ren1P06281 402 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 P10404 641 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 MdkP12025 140 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Nkx2-1P50220 372 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Tango2P54797 276 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Foxf1Q61080 378 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Il11ra1Q64385 432 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Olfr967Q7TRA6 310 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Slc38a9Q8BGD6 560 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Prodh2Q8VCZ9 456 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Olfr998Q8VF76 314 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Lysmd1Q9D0E3 226 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Hint2Q9D0S9 163 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Kti12Q9D1R2 351 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Olfr934Q9EQ87 310 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Dusp13Q9QYJ7 198 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Tcrg-C4A0A075B6C7 190 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Trav12-2A0N8N6 114 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Vmn1r177E9PXM3 309 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Olfr750E9Q0Z1 331 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Ifna1P01572 189 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Oprm1P42866 398 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Rab7aP51150 207 aaKnown RBP10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Crebl2Q32M00 123 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Gm10912Q3UXH0 145 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 4930512M02RikQ5SQK8 218 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Olfr1137Q7TR40 310 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Olfr112Q8C0S2 320 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Glrx2Q923X4 156 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Scrt1Q99M85 348 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Fam241aQ9CZL2 131 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Smdt1Q9DB10 107 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Ypel1Q9ESC7 118 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 AplnrQ9WV08 377 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Plxna3P70208 1872 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Kif26aQ52KG5 1881 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Zfp971A2BFG8 470 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Gm15440D3Z3P4 90 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Gm5916G5E8W5 102 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Gm21820J3KMU2 361 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Vmn1r128L7N2B4 307 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Lef1P27782 397 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Oprd1P32300 372 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Arf3P61205 181 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Zfp970Q08BU3 522 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 CstbQ62426 98 aaKnown RBP10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Rspo2Q8BFU0 243 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Tmem212Q8C6V3 187 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 C1saQ8CG14 688 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Cdc42ep3Q9CQC5 254 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Atp6v1fQ9D1K2 119 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Slc25a27Q9D6D0 322 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Clec3aQ9EPW4 196 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Hsf4Q9R0L1 492 aa10.84□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Dnah12Q3V0Q1 3086 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Ighv16-1A0A0A6YW39 117 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Gm4788E9Q8B5 879 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Evx1P23683 416 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Mc5rP41149 325 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Rpl27P61358 136 aaKnown RBP10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Otx1P80205 355 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Lhfpl4Q5U4E0 247 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Pck2Q8BH04 640 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Fam124bQ8BLQ0 456 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Olfr641Q8VGX6 312 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Tmem50bQ9D1X9 158 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Lypd6bQ9D7F2 191 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Vax2Q9WTP9 292 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Fam208bQ5DTT3 2382 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Olfr455A0A0B4J1M2 317 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Gm20696H3BJN7 74 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Gsc2P56916 198 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Kcnab1P63143 401 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Defb4P82019 63 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 BC147527Q3V185 167 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Znf689Q8BKK5 500 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Tmem170aQ9D342 144 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Pnliprp2P17892 482 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Pmp2P24526 132 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Hist1h3aP68433 136 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Slc25a33Q3TZX3 320 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 AccslQ3UX83 580 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Olfr145Q60882 310 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Olfr988Q7TRA1 309 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Olfr399Q7TRX3 311 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Olfr309Q7TS01 308 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Csnk1a1Q8BK63 337 aaKnown RBP10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Csnk1g2Q8BVP5 415 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Rtn4rl1Q8K0S5 445 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Olfr732Q8VFT5 308 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Hspb2Q99PR8 182 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Emc6Q9CQW0 110 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 4933402D24RikQ9D4D3 167 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Vmn1r47Q9EQ51 310 aa10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Suclg1Q9WUM5 346 aaKnown RBP10.83□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Atg2aQ6P4T0 1914 aa10.82□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Vwa8Q8CC88 1905 aa10.82□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Ep300B2RWS6 2412 aa10.82□□□□□ -0.68
Pcdh1-202ENSMUST00000159405 Baz2aQ91YE5 1889 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms