Protein–RNA interactions for Protein: A0A0A6YW39

Ighv16-1, Immunoglobulin heavy variable 16-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv16-1A0A0A6YW39 Gm25239-201ENSMUST00000174915 86 ntBASIC34.61■■■■□ 3.13
Ighv16-1A0A0A6YW39 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Ighv16-1A0A0A6YW39 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ighv16-1A0A0A6YW39 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ighv16-1A0A0A6YW39 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ighv16-1A0A0A6YW39 Gm15042-201ENSMUST00000120212 883 ntBASIC30.5■■■□□ 2.47
Ighv16-1A0A0A6YW39 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
Ighv16-1A0A0A6YW39 Gm15045-201ENSMUST00000117359 883 ntBASIC29.86■■■□□ 2.37
Ighv16-1A0A0A6YW39 Gm24109-201ENSMUST00000175489 103 ntBASIC29.85■■■□□ 2.37
Ighv16-1A0A0A6YW39 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Ighv16-1A0A0A6YW39 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ighv16-1A0A0A6YW39 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ighv16-1A0A0A6YW39 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Ighv16-1A0A0A6YW39 Gm23366-201ENSMUST00000175022 89 ntBASIC28.93■■■□□ 2.22
Ighv16-1A0A0A6YW39 Psd-208ENSMUST00000224556 2034 ntBASIC28.91■■■□□ 2.22
Ighv16-1A0A0A6YW39 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.87■■■□□ 2.21
Ighv16-1A0A0A6YW39 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Ighv16-1A0A0A6YW39 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.17
Ighv16-1A0A0A6YW39 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ighv16-1A0A0A6YW39 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ighv16-1A0A0A6YW39 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ighv16-1A0A0A6YW39 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ighv16-1A0A0A6YW39 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ighv16-1A0A0A6YW39 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ighv16-1A0A0A6YW39 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ighv16-1A0A0A6YW39 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ighv16-1A0A0A6YW39 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.13■■■□□ 2.09
Ighv16-1A0A0A6YW39 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
Ighv16-1A0A0A6YW39 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.05■■■□□ 2.08
Ighv16-1A0A0A6YW39 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Ighv16-1A0A0A6YW39 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Ighv16-1A0A0A6YW39 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.76■■■□□ 2.03
Ighv16-1A0A0A6YW39 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Ighv16-1A0A0A6YW39 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ighv16-1A0A0A6YW39 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.66■■■□□ 2.02
Ighv16-1A0A0A6YW39 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.41■■□□□ 1.98
Ighv16-1A0A0A6YW39 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ighv16-1A0A0A6YW39 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ighv16-1A0A0A6YW39 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ighv16-1A0A0A6YW39 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ighv16-1A0A0A6YW39 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ighv16-1A0A0A6YW39 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ighv16-1A0A0A6YW39 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.24■■□□□ 1.95
Ighv16-1A0A0A6YW39 Gm25238-201ENSMUST00000174914 89 ntBASIC27.24■■□□□ 1.95
Ighv16-1A0A0A6YW39 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ighv16-1A0A0A6YW39 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.17■■□□□ 1.94
Ighv16-1A0A0A6YW39 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ighv16-1A0A0A6YW39 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ighv16-1A0A0A6YW39 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.04■■□□□ 1.92
Ighv16-1A0A0A6YW39 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ighv16-1A0A0A6YW39 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ighv16-1A0A0A6YW39 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Ighv16-1A0A0A6YW39 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ighv16-1A0A0A6YW39 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ighv16-1A0A0A6YW39 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ighv16-1A0A0A6YW39 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.79■■□□□ 1.88
Ighv16-1A0A0A6YW39 Gm27325-201ENSMUST00000175467 74 ntBASIC26.78■■□□□ 1.88
Ighv16-1A0A0A6YW39 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.74■■□□□ 1.87
Ighv16-1A0A0A6YW39 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Ighv16-1A0A0A6YW39 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
Ighv16-1A0A0A6YW39 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ighv16-1A0A0A6YW39 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.62■■□□□ 1.85
Ighv16-1A0A0A6YW39 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ighv16-1A0A0A6YW39 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.55■■□□□ 1.84
Ighv16-1A0A0A6YW39 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ighv16-1A0A0A6YW39 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ighv16-1A0A0A6YW39 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Ighv16-1A0A0A6YW39 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ighv16-1A0A0A6YW39 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ighv16-1A0A0A6YW39 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.4■■□□□ 1.82
Ighv16-1A0A0A6YW39 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.4■■□□□ 1.82
Ighv16-1A0A0A6YW39 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ighv16-1A0A0A6YW39 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.39■■□□□ 1.82
Ighv16-1A0A0A6YW39 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ighv16-1A0A0A6YW39 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ighv16-1A0A0A6YW39 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.3■■□□□ 1.8
Ighv16-1A0A0A6YW39 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ighv16-1A0A0A6YW39 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
Ighv16-1A0A0A6YW39 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Ighv16-1A0A0A6YW39 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ighv16-1A0A0A6YW39 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.13■■□□□ 1.77
Ighv16-1A0A0A6YW39 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ighv16-1A0A0A6YW39 Rab21-202ENSMUST00000218831 843 ntBASIC26.1■■□□□ 1.77
Ighv16-1A0A0A6YW39 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ighv16-1A0A0A6YW39 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ighv16-1A0A0A6YW39 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26■■□□□ 1.75
Ighv16-1A0A0A6YW39 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ighv16-1A0A0A6YW39 Gm25262-201ENSMUST00000174934 133 ntBASIC25.95■■□□□ 1.74
Ighv16-1A0A0A6YW39 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Ighv16-1A0A0A6YW39 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Ighv16-1A0A0A6YW39 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.82■■□□□ 1.72
Ighv16-1A0A0A6YW39 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ighv16-1A0A0A6YW39 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ighv16-1A0A0A6YW39 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ighv16-1A0A0A6YW39 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.79■■□□□ 1.72
Ighv16-1A0A0A6YW39 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.76■■□□□ 1.71
Ighv16-1A0A0A6YW39 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Ighv16-1A0A0A6YW39 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ighv16-1A0A0A6YW39 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ighv16-1A0A0A6YW39 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms