RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 MAGEA2P43356 314 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 TRMT12Q53H54 448 aaKnown RBP2.35□□□□□ -2.03
CLN5-212ENST00000636602 SCGB1D4Q6XE38 83 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 RPRMLQ8N4K4 120 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 C3orf22Q8N5N4 141 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 BPIFB6Q8NFQ5 453 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 OR11G2Q8NGC1 345 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 ERMNQ8TAM6 284 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 TNFAIP8L1Q8WVP5 186 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 KCTD7Q96MP8 289 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 B9D2Q9BPU9 175 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 ARL6Q9H0F7 186 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 DUSP21Q9H596 190 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 ASF1BQ9NVP2 202 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 USE1Q9NZ43 259 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 PHLDA3Q9Y5J5 127 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 SNX10Q9Y5X0 201 aa2.35□□□□□ -2.03
CLN5-212ENST00000636602 MED1Q15648 1581 aaPredicted RBP2.35□□□□□ -2.03
CLN5-212ENST00000636602 PIK3C2AO00443 1686 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 PPIP5K1Q6PFW1 1433 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 NWD2Q9ULI1 1742 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 LTN1O94822 1766 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 C15orf65H3BRN8 121 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 EEF1E1O43324 174 aaKnown RBP2.34□□□□□ -2.03
CLN5-212ENST00000636602 KLHL2O95198 593 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 IGKV1-17P01599 117 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 IGHMP01871 453 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 COX5BP10606 129 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 ORM2P19652 201 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 GABRA3P34903 492 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 IFNGR2P38484 337 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 PSMB3P49720 205 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 BLVRAP53004 296 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 DEFA6Q01524 100 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 MAPK14Q16539 360 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 SPATA31B1PQ5VZV4 182 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 CYHR1Q6ZMK1 362 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 LYZL2Q7Z4W2 148 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 NIT1Q86X76 327 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 TMEM156Q8N614 296 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 YIPF7Q8N8F6 280 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 MROQ9BYG7 248 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 SLC22A4Q9H015 551 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 GTSF1LQ9H1H1 148 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 MS4A6AQ9H2W1 248 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 ZNF286AQ9HBT8 521 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 UBAP1Q9NZ09 502 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 OR5V1Q9UGF6 321 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 RPUSD1Q9UJJ7 312 aaKnown RBP2.34□□□□□ -2.03
CLN5-212ENST00000636602 R4GN34 69 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 U3KQK5 164 aa2.34□□□□□ -2.03
CLN5-212ENST00000636602 FAM208AQ9UK61 1670 aaKnown RBP2.34□□□□□ -2.04
CLN5-212ENST00000636602 ANKRD36BQ8N2N9 1353 aa2.34□□□□□ -2.04
CLN5-212ENST00000636602 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.34□□□□□ -2.04
CLN5-212ENST00000636602 CPSF1Q10570 1443 aaKnown RBP2.34□□□□□ -2.04
CLN5-212ENST00000636602 TNS3Q68CZ2 1445 aa2.34□□□□□ -2.04
CLN5-212ENST00000636602 EDC4Q6P2E9 1401 aaKnown RBP2.34□□□□□ -2.04
CLN5-212ENST00000636602 PXDNQ92626 1479 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 MAP2P11137 1827 aaKnown RBP2.33□□□□□ -2.04
CLN5-212ENST00000636602 ABCC6O95255 1503 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 TRBV24-1A0A075B6N3 115 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 IGKV1D-17A0A075B6S4 117 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 SH2D1AO60880 128 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 HBZP02008 142 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 CD5P06127 495 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 LINC00614P0C842 121 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 PSKH1P11801 424 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 CTLA4P16410 223 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 ACTBP60709 375 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 DAD1P61803 113 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 ACTG1P63261 375 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 BAMBIQ13145 260 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 APOFQ13790 326 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 SLC9A3R2Q15599 337 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 LRRC26Q2I0M4 334 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 SLC36A2Q495M3 483 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 PTRHD1Q6GMV3 140 aaKnown RBP2.33□□□□□ -2.04
CLN5-212ENST00000636602 NATD1Q8N6N6 113 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 TMEM75Q8N9X5 138 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 ZNF721Q8TF20 911 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 HIST1H2BAQ96A08 127 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 DHRS9Q9BPW9 319 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 C11orf49Q9H6J7 331 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 UBQLN4Q9NRR5 601 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 SLC23A2Q9UGH3 650 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 LINC00527Q9UJ94 153 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 NUP205Q92621 2012 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 PLCH1Q4KWH8 1693 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 TTC21AQ8NDW8 1320 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 ARHGEF10O15013 1369 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 COL1A2P08123 1366 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 KTN1Q86UP2 1357 aaKnown RBP2.33□□□□□ -2.04
CLN5-212ENST00000636602 COL14A1Q05707 1796 aaKnown RBP2.33□□□□□ -2.04
CLN5-212ENST00000636602 SEC16AO15027 2179 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 SSH2Q76I76 1423 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 CD163L1Q9NR16 1453 aa2.33□□□□□ -2.04
CLN5-212ENST00000636602 TRIOBPQ9H2D6 2365 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 NRAPQ86VF7 1730 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms