RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 KCTD12Q96CX2 325 aaKnown RBP14.29□□□□□ -0.12
SEMA3B-211ENST00000612509 NOL4LQ96MY1 436 aaPredicted RBP14.29□□□□□ -0.12
SEMA3B-211ENST00000612509 PSMB11A5LHX3 300 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 ADARB2-AS1A8MUL3 147 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 NBR2O15453 112 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 KCNAB3O43448 404 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 PROP1O75360 226 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 OR8U9P0C7N5 309 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 CNTFRP26992 372 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 ALDH3B2P48448 385 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 CTF1Q16619 201 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 TCTEX1D4Q5JR98 221 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 SAMD12Q8N8I0 201 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 OR5AN1Q8NGI8 311 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 OR8U1Q8NH10 309 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 RITA1Q96K30 269 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 HSPB9Q9BQS6 159 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 AUNIPQ9H7T9 357 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 WASHC3Q9Y3C0 194 aa14.28□□□□□ -0.12
SEMA3B-211ENST00000612509 M0R1X1 148 aa14.27□□□□□ -0.13
SEMA3B-211ENST00000612509 TFAP2AP05549 437 aa14.27□□□□□ -0.13
SEMA3B-211ENST00000612509 SOX6P35712 828 aa14.27□□□□□ -0.13
SEMA3B-211ENST00000612509 CD83Q01151 205 aa14.27□□□□□ -0.13
SEMA3B-211ENST00000612509 GPR107Q5VW38 600 aa14.27□□□□□ -0.13
SEMA3B-211ENST00000612509 GPR141Q7Z602 305 aa14.27□□□□□ -0.13
SEMA3B-211ENST00000612509 STPG2Q8N412 459 aa14.27□□□□□ -0.13
SEMA3B-211ENST00000612509 ZNF383Q8NA42 475 aa14.27□□□□□ -0.13
SEMA3B-211ENST00000612509 DRAXINQ8NBI3 349 aaPredicted RBP14.27□□□□□ -0.13
SEMA3B-211ENST00000612509 FAM110DQ8TAY7 271 aaPredicted RBP14.27□□□□□ -0.13
SEMA3B-211ENST00000612509 CHPT1Q8WUD6 406 aa14.27□□□□□ -0.13
SEMA3B-211ENST00000612509 C5orf30Q96GV9 206 aa14.27□□□□□ -0.13
SEMA3B-211ENST00000612509 SDHAF2Q9NX18 166 aa14.27□□□□□ -0.13
SEMA3B-211ENST00000612509 ANXA10Q9UJ72 324 aa14.27□□□□□ -0.13
SEMA3B-211ENST00000612509 LINC00527Q9UJ94 153 aa14.27□□□□□ -0.13
SEMA3B-211ENST00000612509 LINC01548A6NM66 108 aa14.26□□□□□ -0.13
SEMA3B-211ENST00000612509 H7C2Y5 167 aa14.26□□□□□ -0.13
SEMA3B-211ENST00000612509 AP4M1O00189 453 aa14.26□□□□□ -0.13
SEMA3B-211ENST00000612509 XRCC3O43542 346 aa14.26□□□□□ -0.13
SEMA3B-211ENST00000612509 NDUFA3O95167 84 aa14.26□□□□□ -0.13
SEMA3B-211ENST00000612509 CTXN2P0C2S0 81 aa14.26□□□□□ -0.13
SEMA3B-211ENST00000612509 PTHLHP12272 177 aa14.26□□□□□ -0.13
SEMA3B-211ENST00000612509 MC5RP33032 325 aa14.26□□□□□ -0.13
SEMA3B-211ENST00000612509 CNIH2Q6PI25 160 aa14.26□□□□□ -0.13
SEMA3B-211ENST00000612509 ZNF329Q86UD4 541 aa14.26□□□□□ -0.13
SEMA3B-211ENST00000612509 NPBQ8NG41 125 aa14.26□□□□□ -0.13
SEMA3B-211ENST00000612509 S100A16Q96FQ6 103 aaKnown RBP14.26□□□□□ -0.13
SEMA3B-211ENST00000612509 KIAA1456Q9P272 454 aa14.26□□□□□ -0.13
SEMA3B-211ENST00000612509 ZNF107Q9UII5 783 aaPredicted RBP14.26□□□□□ -0.13
SEMA3B-211ENST00000612509 GAB2Q9UQC2 676 aa14.26□□□□□ -0.13
SEMA3B-211ENST00000612509 RBM7Q9Y580 266 aaKnown RBP14.26□□□□□ -0.13
SEMA3B-211ENST00000612509 RBBP9O75884 186 aa14.25□□□□□ -0.13
SEMA3B-211ENST00000612509 APOA2P02652 100 aa14.25□□□□□ -0.13
SEMA3B-211ENST00000612509 OPN1MWP04001 364 aa14.25□□□□□ -0.13
SEMA3B-211ENST00000612509 OPN1MW2P0DN77 364 aa14.25□□□□□ -0.13
SEMA3B-211ENST00000612509 OPN1MW3P0DN78 364 aa14.25□□□□□ -0.13
SEMA3B-211ENST00000612509 LINC00205P59089 165 aa14.25□□□□□ -0.13
SEMA3B-211ENST00000612509 C5orf64Q2M2E5 130 aa14.25□□□□□ -0.13
SEMA3B-211ENST00000612509 KHDC1LQ5JSQ8 128 aa14.25□□□□□ -0.13
SEMA3B-211ENST00000612509 TMEM69Q5SWH9 247 aa14.25□□□□□ -0.13
SEMA3B-211ENST00000612509 PDPNQ86YL7 162 aa14.25□□□□□ -0.13
SEMA3B-211ENST00000612509 GVQW1Q8N7I0 195 aa14.25□□□□□ -0.13
SEMA3B-211ENST00000612509 BEST4Q8NFU0 473 aa14.25□□□□□ -0.13
SEMA3B-211ENST00000612509 A0A1W2PRX2 142 aa14.24□□□□□ -0.13
SEMA3B-211ENST00000612509 TCRBV4S1A1TA0A5B7 111 aa14.24□□□□□ -0.13
SEMA3B-211ENST00000612509 HLA-DRB1P01911 266 aa14.24□□□□□ -0.13
SEMA3B-211ENST00000612509 EIF4EP06730 217 aaKnown RBP14.24□□□□□ -0.13
SEMA3B-211ENST00000612509 NFYAP23511 347 aaPredicted RBP14.24□□□□□ -0.13
SEMA3B-211ENST00000612509 TAS2R20P59543 309 aa14.24□□□□□ -0.13
SEMA3B-211ENST00000612509 SLC35B1P78383 322 aa14.24□□□□□ -0.13
SEMA3B-211ENST00000612509 HOGA1Q86XE5 327 aa14.24□□□□□ -0.13
SEMA3B-211ENST00000612509 SLC35D1Q9NTN3 355 aa14.24□□□□□ -0.13
SEMA3B-211ENST00000612509 COMMD3Q9UBI1 195 aa14.24□□□□□ -0.13
SEMA3B-211ENST00000612509 TSSC4Q9Y5U2 329 aaPredicted RBP14.24□□□□□ -0.13
SEMA3B-211ENST00000612509 RRHO14718 337 aa14.23□□□□□ -0.13
SEMA3B-211ENST00000612509 IGKV1-16P04430 117 aa14.23□□□□□ -0.13
SEMA3B-211ENST00000612509 CBX5P45973 191 aa14.23□□□□□ -0.13
SEMA3B-211ENST00000612509 RORCP51449 518 aa14.23□□□□□ -0.13
SEMA3B-211ENST00000612509 ARPC4P59998 168 aa14.23□□□□□ -0.13
SEMA3B-211ENST00000612509 OR4F17Q8NGA8 305 aa14.23□□□□□ -0.13
SEMA3B-211ENST00000612509 ACOT12Q8WYK0 555 aa14.23□□□□□ -0.13
SEMA3B-211ENST00000612509 SNAPC3Q92966 411 aa14.23□□□□□ -0.13
SEMA3B-211ENST00000612509 R3HDM4Q96D70 268 aa14.23□□□□□ -0.13
SEMA3B-211ENST00000612509 OR4F4Q96R69 305 aa14.23□□□□□ -0.13
SEMA3B-211ENST00000612509 RNF5Q99942 180 aa14.23□□□□□ -0.13
SEMA3B-211ENST00000612509 FBXL15Q9H469 300 aa14.23□□□□□ -0.13
SEMA3B-211ENST00000612509 ZNF580Q9UK33 172 aa14.23□□□□□ -0.13
SEMA3B-211ENST00000612509 OR2W1Q9Y3N9 320 aa14.23□□□□□ -0.13
SEMA3B-211ENST00000612509 VWFP04275 2813 aa14.22□□□□□ -0.13
SEMA3B-211ENST00000612509 IGHV7-81A0A0B4J1V7 117 aa14.22□□□□□ -0.13
SEMA3B-211ENST00000612509 MEIS3P1A6NDR6 274 aa14.22□□□□□ -0.13
SEMA3B-211ENST00000612509 SPDEFO95238 335 aa14.22□□□□□ -0.13
SEMA3B-211ENST00000612509 APOA1P02647 267 aa14.22□□□□□ -0.13
SEMA3B-211ENST00000612509 FCER2P06734 321 aa14.22□□□□□ -0.13
SEMA3B-211ENST00000612509 THBS3P49746 956 aa14.22□□□□□ -0.13
SEMA3B-211ENST00000612509 LUMP51884 338 aaPredicted RBP14.22□□□□□ -0.13
SEMA3B-211ENST00000612509 COMMD1Q8N668 190 aa14.22□□□□□ -0.13
SEMA3B-211ENST00000612509 ZNF645Q8N7E2 425 aa14.22□□□□□ -0.13
SEMA3B-211ENST00000612509 CMTM3Q96MX0 182 aa14.22□□□□□ -0.13
SEMA3B-211ENST00000612509 GON7Q9BXV9 100 aa14.22□□□□□ -0.13
SEMA3B-211ENST00000612509 IGKV1D-13A0A0B4J2D9 117 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms