RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 OR2D2Q9H210 308 aa20.59■□□□□ 0.89
VEGFA-226ENST00000611736 ABCG5Q9H222 651 aa20.59■□□□□ 0.89
VEGFA-226ENST00000611736 AUNIPQ9H7T9 357 aa20.59■□□□□ 0.89
VEGFA-226ENST00000611736 LINC00527Q9UJ94 153 aa20.59■□□□□ 0.89
VEGFA-226ENST00000611736 LINC01548A6NM66 108 aa20.58■□□□□ 0.89
VEGFA-226ENST00000611736 H0YJW9 148 aa20.58■□□□□ 0.89
VEGFA-226ENST00000611736 PROP1O75360 226 aa20.58■□□□□ 0.89
VEGFA-226ENST00000611736 IGHG2P01859 326 aa20.58■□□□□ 0.89
VEGFA-226ENST00000611736 TFAP2AP05549 437 aa20.58■□□□□ 0.89
VEGFA-226ENST00000611736 PTHLHP12272 177 aa20.58■□□□□ 0.89
VEGFA-226ENST00000611736 FAM110DQ8TAY7 271 aaPredicted RBP20.58■□□□□ 0.89
VEGFA-226ENST00000611736 KCTD12Q96CX2 325 aaKnown RBP20.58■□□□□ 0.89
VEGFA-226ENST00000611736 S100A16Q96FQ6 103 aaKnown RBP20.58■□□□□ 0.89
VEGFA-226ENST00000611736 MMP27Q9H306 513 aa20.58■□□□□ 0.89
VEGFA-226ENST00000611736 RBM7Q9Y580 266 aaKnown RBP20.58■□□□□ 0.89
VEGFA-226ENST00000611736 OR5H14A6NHG9 310 aa20.57■□□□□ 0.88
VEGFA-226ENST00000611736 H7C2Y5 167 aa20.57■□□□□ 0.88
VEGFA-226ENST00000611736 M0R1X1 148 aa20.57■□□□□ 0.88
VEGFA-226ENST00000611736 LINC00205P59089 165 aa20.57■□□□□ 0.88
VEGFA-226ENST00000611736 H1FOOQ8IZA3 346 aaPredicted RBP20.57■□□□□ 0.88
VEGFA-226ENST00000611736 COMMD3Q9UBI1 195 aa20.57■□□□□ 0.88
VEGFA-226ENST00000611736 PSMB11A5LHX3 300 aa20.56■□□□□ 0.88
VEGFA-226ENST00000611736 XRCC3O43542 346 aa20.56■□□□□ 0.88
VEGFA-226ENST00000611736 ZNF329Q86UD4 541 aa20.56■□□□□ 0.88
VEGFA-226ENST00000611736 FOXRED2Q8IWF2 684 aa20.56■□□□□ 0.88
VEGFA-226ENST00000611736 GVQW1Q8N7I0 195 aa20.56■□□□□ 0.88
VEGFA-226ENST00000611736 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-226ENST00000611736 HSPB9Q9BQS6 159 aa20.56■□□□□ 0.88
VEGFA-226ENST00000611736 ANXA10Q9UJ72 324 aa20.56■□□□□ 0.88
VEGFA-226ENST00000611736 WASHC3Q9Y3C0 194 aa20.56■□□□□ 0.88
VEGFA-226ENST00000611736 J3QRK9 145 aa20.55■□□□□ 0.88
VEGFA-226ENST00000611736 NBR2O15453 112 aa20.55■□□□□ 0.88
VEGFA-226ENST00000611736 FCER2P06734 321 aa20.55■□□□□ 0.88
VEGFA-226ENST00000611736 CTXN2P0C2S0 81 aa20.55■□□□□ 0.88
VEGFA-226ENST00000611736 MC5RP33032 325 aa20.55■□□□□ 0.88
VEGFA-226ENST00000611736 SOX6P35712 828 aa20.55■□□□□ 0.88
VEGFA-226ENST00000611736 TCTEX1D4Q5JR98 221 aa20.55■□□□□ 0.88
VEGFA-226ENST00000611736 TMEM69Q5SWH9 247 aa20.55■□□□□ 0.88
VEGFA-226ENST00000611736 CNIH2Q6PI25 160 aa20.55■□□□□ 0.88
VEGFA-226ENST00000611736 NDUFA11Q86Y39 141 aa20.55■□□□□ 0.88
VEGFA-226ENST00000611736 ZNF383Q8NA42 475 aa20.55■□□□□ 0.88
VEGFA-226ENST00000611736 OR4X2Q8NGF9 303 aa20.55■□□□□ 0.88
VEGFA-226ENST00000611736 OR5AN1Q8NGI8 311 aa20.55■□□□□ 0.88
VEGFA-226ENST00000611736 CHPT1Q8WUD6 406 aa20.55■□□□□ 0.88
VEGFA-226ENST00000611736 SDHAF2Q9NX18 166 aa20.55■□□□□ 0.88
VEGFA-226ENST00000611736 NOTCH1P46531 2555 aa20.55■□□□□ 0.88
VEGFA-226ENST00000611736 PLXNB1O43157 2135 aa20.54■□□□□ 0.88
VEGFA-226ENST00000611736 A0A1W2PRX2 142 aa20.54■□□□□ 0.88
VEGFA-226ENST00000611736 TCRBV4S1A1TA0A5B7 111 aa20.54■□□□□ 0.88
VEGFA-226ENST00000611736 NFYAP23511 347 aaPredicted RBP20.54■□□□□ 0.88
VEGFA-226ENST00000611736 RORCP51449 518 aa20.54■□□□□ 0.88
VEGFA-226ENST00000611736 CD83Q01151 205 aa20.54■□□□□ 0.88
VEGFA-226ENST00000611736 BEST4Q8NFU0 473 aa20.54■□□□□ 0.88
VEGFA-226ENST00000611736 C5orf30Q96GV9 206 aa20.54■□□□□ 0.88
VEGFA-226ENST00000611736 KIAA1456Q9P272 454 aa20.54■□□□□ 0.88
VEGFA-226ENST00000611736 MEIS3P1A6NDR6 274 aa20.53■□□□□ 0.88
VEGFA-226ENST00000611736 ADARB2-AS1A8MUL3 147 aa20.53■□□□□ 0.88
VEGFA-226ENST00000611736 AP4M1O00189 453 aa20.53■□□□□ 0.88
VEGFA-226ENST00000611736 KCNAB3O43448 404 aa20.53■□□□□ 0.88
VEGFA-226ENST00000611736 EIF4EP06730 217 aaKnown RBP20.53■□□□□ 0.88
VEGFA-226ENST00000611736 TAS2R20P59543 309 aa20.53■□□□□ 0.88
VEGFA-226ENST00000611736 KHDC1LQ5JSQ8 128 aa20.53■□□□□ 0.88
VEGFA-226ENST00000611736 HOGA1Q86XE5 327 aa20.53■□□□□ 0.88
VEGFA-226ENST00000611736 STPG2Q8N412 459 aa20.53■□□□□ 0.88
VEGFA-226ENST00000611736 ZNF107Q9UII5 783 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-226ENST00000611736 APOA2P02652 100 aa20.52■□□□□ 0.88
VEGFA-226ENST00000611736 ARPC4P59998 168 aa20.52■□□□□ 0.88
VEGFA-226ENST00000611736 C5orf64Q2M2E5 130 aa20.52■□□□□ 0.88
VEGFA-226ENST00000611736 NPBQ8NG41 125 aa20.52■□□□□ 0.88
VEGFA-226ENST00000611736 GAB2Q9UQC2 676 aa20.52■□□□□ 0.88
VEGFA-226ENST00000611736 RBBP9O75884 186 aa20.51■□□□□ 0.87
VEGFA-226ENST00000611736 CLVS1Q8IUQ0 354 aaPredicted RBP20.51■□□□□ 0.87
VEGFA-226ENST00000611736 ACOT12Q8WYK0 555 aa20.51■□□□□ 0.87
VEGFA-226ENST00000611736 OR2W1Q9Y3N9 320 aa20.51■□□□□ 0.87
VEGFA-226ENST00000611736 NOTCH3Q9UM47 2321 aa20.5■□□□□ 0.87
VEGFA-226ENST00000611736 NDUFA3O95167 84 aa20.5■□□□□ 0.87
VEGFA-226ENST00000611736 OPN1MWP04001 364 aa20.5■□□□□ 0.87
VEGFA-226ENST00000611736 IGKV1-16P04430 117 aa20.5■□□□□ 0.87
VEGFA-226ENST00000611736 OPN1MW2P0DN77 364 aa20.5■□□□□ 0.87
VEGFA-226ENST00000611736 OPN1MW3P0DN78 364 aa20.5■□□□□ 0.87
VEGFA-226ENST00000611736 CBX5P45973 191 aa20.5■□□□□ 0.87
VEGFA-226ENST00000611736 LUMP51884 338 aaPredicted RBP20.5■□□□□ 0.87
VEGFA-226ENST00000611736 SLC35B1P78383 322 aa20.5■□□□□ 0.87
VEGFA-226ENST00000611736 R3HDM4Q96D70 268 aa20.5■□□□□ 0.87
VEGFA-226ENST00000611736 FBXL15Q9H469 300 aa20.5■□□□□ 0.87
VEGFA-226ENST00000611736 IFT46Q9NQC8 304 aa20.5■□□□□ 0.87
VEGFA-226ENST00000611736 SLC35D1Q9NTN3 355 aa20.5■□□□□ 0.87
VEGFA-226ENST00000611736 TSSC4Q9Y5U2 329 aaPredicted RBP20.5■□□□□ 0.87
VEGFA-226ENST00000611736 RRHO14718 337 aa20.49■□□□□ 0.87
VEGFA-226ENST00000611736 HPGDSO60760 199 aa20.49■□□□□ 0.87
VEGFA-226ENST00000611736 HLA-DRB1P01911 266 aa20.49■□□□□ 0.87
VEGFA-226ENST00000611736 APOA1P02647 267 aa20.49■□□□□ 0.87
VEGFA-226ENST00000611736 PLGLAQ15195 96 aa20.49■□□□□ 0.87
VEGFA-226ENST00000611736 PDPNQ86YL7 162 aa20.49■□□□□ 0.87
VEGFA-226ENST00000611736 HLA-DQB1P01920 261 aa20.48■□□□□ 0.87
VEGFA-226ENST00000611736 RPS16P62249 146 aaKnown RBP20.48■□□□□ 0.87
VEGFA-226ENST00000611736 LIN54Q6MZP7 749 aa20.48■□□□□ 0.87
VEGFA-226ENST00000611736 MZT2AQ6P582 158 aa20.48■□□□□ 0.87
VEGFA-226ENST00000611736 AP3S1Q92572 193 aa20.48■□□□□ 0.87
VEGFA-226ENST00000611736 SNAPC3Q92966 411 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms