RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 RITA1Q96K30 269 aa15.78■□□□□ 0.12
TSPAN3-210ENST00000561277 H0YJW9 148 aa15.77■□□□□ 0.11
TSPAN3-210ENST00000561277 H7C2Y5 167 aa15.77■□□□□ 0.11
TSPAN3-210ENST00000561277 J3QRK9 145 aa15.77■□□□□ 0.11
TSPAN3-210ENST00000561277 M0R1X1 148 aa15.77■□□□□ 0.11
TSPAN3-210ENST00000561277 PROP1O75360 226 aa15.77■□□□□ 0.11
TSPAN3-210ENST00000561277 TSPAN15O95858 294 aa15.77■□□□□ 0.11
TSPAN3-210ENST00000561277 RORCP51449 518 aa15.77■□□□□ 0.11
TSPAN3-210ENST00000561277 LINC00205P59089 165 aa15.77■□□□□ 0.11
TSPAN3-210ENST00000561277 TREML4Q6UXN2 200 aa15.77■□□□□ 0.11
TSPAN3-210ENST00000561277 H1FOOQ8IZA3 346 aaPredicted RBP15.77■□□□□ 0.11
TSPAN3-210ENST00000561277 FAM71E2Q8N5Q1 922 aa15.77■□□□□ 0.11
TSPAN3-210ENST00000561277 NOL4LQ96MY1 436 aaPredicted RBP15.77■□□□□ 0.11
TSPAN3-210ENST00000561277 ANXA10Q9UJ72 324 aa15.77■□□□□ 0.11
TSPAN3-210ENST00000561277 LINC00527Q9UJ94 153 aa15.77■□□□□ 0.11
TSPAN3-210ENST00000561277 VWFP04275 2813 aa15.76■□□□□ 0.11
TSPAN3-210ENST00000561277 MEIS3P1A6NDR6 274 aa15.76■□□□□ 0.11
TSPAN3-210ENST00000561277 OR5H14A6NHG9 310 aa15.76■□□□□ 0.11
TSPAN3-210ENST00000561277 IGHG2P01859 326 aa15.76■□□□□ 0.11
TSPAN3-210ENST00000561277 EIF4EP06730 217 aaKnown RBP15.76■□□□□ 0.11
TSPAN3-210ENST00000561277 NFYAP23511 347 aaPredicted RBP15.76■□□□□ 0.11
TSPAN3-210ENST00000561277 TAS2R20P59543 309 aa15.76■□□□□ 0.11
TSPAN3-210ENST00000561277 NSUN5P1Q3KNT7 163 aa15.76■□□□□ 0.11
TSPAN3-210ENST00000561277 C10orf99Q6UWK7 81 aa15.76■□□□□ 0.11
TSPAN3-210ENST00000561277 CLVS1Q8IUQ0 354 aaPredicted RBP15.76■□□□□ 0.11
TSPAN3-210ENST00000561277 BEST4Q8NFU0 473 aa15.76■□□□□ 0.11
TSPAN3-210ENST00000561277 CITED2Q99967 270 aaPredicted RBP15.76■□□□□ 0.11
TSPAN3-210ENST00000561277 LINC01548A6NM66 108 aa15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 CSF1P09603 554 aa15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 CTXN2P0C2S0 81 aa15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 ARPC4P59998 168 aa15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 CNIH2Q6PI25 160 aa15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 OR5AN1Q8NGI8 311 aa15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 HSPB9Q9BQS6 159 aa15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 WASHC3Q9Y3C0 194 aa15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 MGAM2Q2M2H8 2515 aa15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 NBR2O15453 112 aa15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 MC5RP33032 325 aa15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 HOGA1Q86XE5 327 aa15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 FOXRED2Q8IWF2 684 aa15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 ZNF383Q8NA42 475 aa15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 ACOT12Q8WYK0 555 aa15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 SDHAF2Q9NX18 166 aa15.75■□□□□ 0.11
TSPAN3-210ENST00000561277 PSMB11A5LHX3 300 aa15.74■□□□□ 0.11
TSPAN3-210ENST00000561277 HPGDSO60760 199 aa15.74■□□□□ 0.11
TSPAN3-210ENST00000561277 SOX6P35712 828 aa15.74■□□□□ 0.11
TSPAN3-210ENST00000561277 ZNF329Q86UD4 541 aa15.74■□□□□ 0.11
TSPAN3-210ENST00000561277 OR4X2Q8NGF9 303 aa15.74■□□□□ 0.11
TSPAN3-210ENST00000561277 FAM110DQ8TAY7 271 aaPredicted RBP15.74■□□□□ 0.11
TSPAN3-210ENST00000561277 C5orf30Q96GV9 206 aa15.74■□□□□ 0.11
TSPAN3-210ENST00000561277 KIAA1456Q9P272 454 aa15.74■□□□□ 0.11
TSPAN3-210ENST00000561277 WNK1Q9H4A3 2382 aa15.73■□□□□ 0.11
TSPAN3-210ENST00000561277 A0A1W2PRX2 142 aa15.73■□□□□ 0.11
TSPAN3-210ENST00000561277 APOA2P02652 100 aa15.73■□□□□ 0.11
TSPAN3-210ENST00000561277 CHPT1Q8WUD6 406 aa15.73■□□□□ 0.11
TSPAN3-210ENST00000561277 AP3S1Q92572 193 aa15.73■□□□□ 0.11
TSPAN3-210ENST00000561277 MMP27Q9H306 513 aa15.73■□□□□ 0.11
TSPAN3-210ENST00000561277 IFT46Q9NQC8 304 aa15.73■□□□□ 0.11
TSPAN3-210ENST00000561277 ZNF107Q9UII5 783 aaPredicted RBP15.73■□□□□ 0.11
TSPAN3-210ENST00000561277 MRPS7Q9Y2R9 242 aaKnown RBP15.73■□□□□ 0.11
TSPAN3-210ENST00000561277 OR2W1Q9Y3N9 320 aa15.73■□□□□ 0.11
TSPAN3-210ENST00000561277 AP4M1O00189 453 aa15.72■□□□□ 0.11
TSPAN3-210ENST00000561277 KCNAB3O43448 404 aa15.72■□□□□ 0.11
TSPAN3-210ENST00000561277 APOA1P02647 267 aa15.72■□□□□ 0.11
TSPAN3-210ENST00000561277 IGKV1-16P04430 117 aa15.72■□□□□ 0.11
TSPAN3-210ENST00000561277 CBX5P45973 191 aa15.72■□□□□ 0.11
TSPAN3-210ENST00000561277 RPL5P46777 297 aaKnown RBP15.72■□□□□ 0.11
TSPAN3-210ENST00000561277 SPCS2Q15005 226 aa15.72■□□□□ 0.11
TSPAN3-210ENST00000561277 TCTEX1D4Q5JR98 221 aa15.72■□□□□ 0.11
TSPAN3-210ENST00000561277 KHDC1LQ5JSQ8 128 aa15.72■□□□□ 0.11
TSPAN3-210ENST00000561277 STPG2Q8N412 459 aa15.72■□□□□ 0.11
TSPAN3-210ENST00000561277 ZNF182P17025 639 aaPredicted RBP15.71■□□□□ 0.11
TSPAN3-210ENST00000561277 ELK1P19419 428 aa15.71■□□□□ 0.11
TSPAN3-210ENST00000561277 LUMP51884 338 aaPredicted RBP15.71■□□□□ 0.11
TSPAN3-210ENST00000561277 C5orf64Q2M2E5 130 aa15.71■□□□□ 0.11
TSPAN3-210ENST00000561277 MZT2AQ6P582 158 aa15.71■□□□□ 0.11
TSPAN3-210ENST00000561277 NDUFA11Q86Y39 141 aa15.71■□□□□ 0.11
TSPAN3-210ENST00000561277 PDPNQ86YL7 162 aa15.71■□□□□ 0.11
TSPAN3-210ENST00000561277 SNAPC3Q92966 411 aa15.71■□□□□ 0.11
TSPAN3-210ENST00000561277 SLC35D1Q9NTN3 355 aa15.71■□□□□ 0.11
TSPAN3-210ENST00000561277 GAB2Q9UQC2 676 aa15.71■□□□□ 0.11
TSPAN3-210ENST00000561277 SMIM31A0A1B0GVY4 71 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 TCRBV4S1A1TA0A5B7 111 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 FAM25AB3EWG3 89 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 FAM25CB3EWG5 89 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 FAM25GB3EWG6 89 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 NDUFA3O95167 84 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 CD83Q01151 205 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 PLGLAQ15195 96 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 NPBQ8NG41 125 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 RAB2BQ8WUD1 216 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 CMTM3Q96MX0 182 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 FBXL15Q9H469 300 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 NECAP2Q9NVZ3 263 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 IGKV1D-13A0A0B4J2D9 117 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 RBBP9O75884 186 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 HLA-DQB1P01920 261 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 IGKV1-13P0DP09 117 aa15.7■□□□□ 0.1
TSPAN3-210ENST00000561277 PRSS3P35030 304 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms