RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 MC5RP33032 325 aa18.08■□□□□ 0.48
TDP1-216ENST00000556867 NDUFA11Q86Y39 141 aa18.08■□□□□ 0.48
TDP1-216ENST00000556867 SAMD12Q8N8I0 201 aa18.08■□□□□ 0.48
TDP1-216ENST00000556867 CITED2Q99967 270 aaPredicted RBP18.08■□□□□ 0.48
TDP1-216ENST00000556867 GAB2Q9UQC2 676 aa18.08■□□□□ 0.48
TDP1-216ENST00000556867 XRCC3O43542 346 aa18.07■□□□□ 0.48
TDP1-216ENST00000556867 CTXN2P0C2S0 81 aa18.07■□□□□ 0.48
TDP1-216ENST00000556867 OR8U9P0C7N5 309 aa18.07■□□□□ 0.48
TDP1-216ENST00000556867 CD83Q01151 205 aa18.07■□□□□ 0.48
TDP1-216ENST00000556867 GPR107Q5VW38 600 aa18.07■□□□□ 0.48
TDP1-216ENST00000556867 GLDNQ6ZMI3 551 aaPredicted RBP18.07■□□□□ 0.48
TDP1-216ENST00000556867 GPR141Q7Z602 305 aa18.07■□□□□ 0.48
TDP1-216ENST00000556867 FOXRED2Q8IWF2 684 aa18.07■□□□□ 0.48
TDP1-216ENST00000556867 OR8U1Q8NH10 309 aa18.07■□□□□ 0.48
TDP1-216ENST00000556867 CHPT1Q8WUD6 406 aa18.07■□□□□ 0.48
TDP1-216ENST00000556867 S100A16Q96FQ6 103 aaKnown RBP18.07■□□□□ 0.48
TDP1-216ENST00000556867 RITA1Q96K30 269 aa18.07■□□□□ 0.48
TDP1-216ENST00000556867 OR2D2Q9H210 308 aa18.07■□□□□ 0.48
TDP1-216ENST00000556867 WASHC3Q9Y3C0 194 aa18.07■□□□□ 0.48
TDP1-216ENST00000556867 NBR2O15453 112 aa18.06■□□□□ 0.48
TDP1-216ENST00000556867 KCNAB3O43448 404 aa18.06■□□□□ 0.48
TDP1-216ENST00000556867 CNIH2Q6PI25 160 aa18.06■□□□□ 0.48
TDP1-216ENST00000556867 NPBQ8NG41 125 aa18.06■□□□□ 0.48
TDP1-216ENST00000556867 ANXA10Q9UJ72 324 aa18.06■□□□□ 0.48
TDP1-216ENST00000556867 PSMB11A5LHX3 300 aa18.05■□□□□ 0.48
TDP1-216ENST00000556867 ADARB2-AS1A8MUL3 147 aa18.05■□□□□ 0.48
TDP1-216ENST00000556867 AP4M1O00189 453 aa18.05■□□□□ 0.48
TDP1-216ENST00000556867 RBBP9O75884 186 aa18.05■□□□□ 0.48
TDP1-216ENST00000556867 NDUFA3O95167 84 aa18.05■□□□□ 0.48
TDP1-216ENST00000556867 TCTEX1D4Q5JR98 221 aa18.05■□□□□ 0.48
TDP1-216ENST00000556867 C10orf99Q6UWK7 81 aa18.05■□□□□ 0.48
TDP1-216ENST00000556867 DRAXINQ8NBI3 349 aaPredicted RBP18.05■□□□□ 0.48
TDP1-216ENST00000556867 OR4X2Q8NGF9 303 aa18.05■□□□□ 0.48
TDP1-216ENST00000556867 NOL4LQ96MY1 436 aaPredicted RBP18.05■□□□□ 0.48
TDP1-216ENST00000556867 SDHAF2Q9NX18 166 aa18.05■□□□□ 0.48
TDP1-216ENST00000556867 LINC01548A6NM66 108 aa18.04■□□□□ 0.48
TDP1-216ENST00000556867 M0R1X1 148 aa18.04■□□□□ 0.48
TDP1-216ENST00000556867 CNTFRP26992 372 aa18.04■□□□□ 0.48
TDP1-216ENST00000556867 SOX6P35712 828 aa18.04■□□□□ 0.48
TDP1-216ENST00000556867 HOGA1Q86XE5 327 aa18.04■□□□□ 0.48
TDP1-216ENST00000556867 STPG2Q8N412 459 aa18.04■□□□□ 0.48
TDP1-216ENST00000556867 ZNF383Q8NA42 475 aa18.04■□□□□ 0.48
TDP1-216ENST00000556867 ACOT12Q8WYK0 555 aa18.04■□□□□ 0.48
TDP1-216ENST00000556867 HSPB9Q9BQS6 159 aa18.04■□□□□ 0.48
TDP1-216ENST00000556867 H7C2Y5 167 aa18.03■□□□□ 0.48
TDP1-216ENST00000556867 OPN1MWP04001 364 aa18.03■□□□□ 0.48
TDP1-216ENST00000556867 OPN1MW2P0DN77 364 aa18.03■□□□□ 0.48
TDP1-216ENST00000556867 OPN1MW3P0DN78 364 aa18.03■□□□□ 0.48
TDP1-216ENST00000556867 CBX5P45973 191 aa18.03■□□□□ 0.48
TDP1-216ENST00000556867 RORCP51449 518 aa18.03■□□□□ 0.48
TDP1-216ENST00000556867 C5orf64Q2M2E5 130 aa18.03■□□□□ 0.48
TDP1-216ENST00000556867 NSUN5P1Q3KNT7 163 aa18.03■□□□□ 0.48
TDP1-216ENST00000556867 TMEM69Q5SWH9 247 aa18.03■□□□□ 0.48
TDP1-216ENST00000556867 GVQW1Q8N7I0 195 aa18.03■□□□□ 0.48
TDP1-216ENST00000556867 BEST4Q8NFU0 473 aa18.03■□□□□ 0.48
TDP1-216ENST00000556867 C5orf30Q96GV9 206 aa18.03■□□□□ 0.48
TDP1-216ENST00000556867 CMTM3Q96MX0 182 aa18.03■□□□□ 0.48
TDP1-216ENST00000556867 RNF5Q99942 180 aa18.03■□□□□ 0.48
TDP1-216ENST00000556867 KIAA1456Q9P272 454 aa18.03■□□□□ 0.48
TDP1-216ENST00000556867 COMMD3Q9UBI1 195 aa18.03■□□□□ 0.48
TDP1-216ENST00000556867 ZNF107Q9UII5 783 aaPredicted RBP18.03■□□□□ 0.48
TDP1-216ENST00000556867 RBM7Q9Y580 266 aaKnown RBP18.03■□□□□ 0.48
TDP1-216ENST00000556867 HLA-DRB1P01911 266 aa18.02■□□□□ 0.48
TDP1-216ENST00000556867 APOA2P02652 100 aa18.02■□□□□ 0.48
TDP1-216ENST00000556867 EIF4EP06730 217 aaKnown RBP18.02■□□□□ 0.48
TDP1-216ENST00000556867 PTHLHP12272 177 aa18.02■□□□□ 0.48
TDP1-216ENST00000556867 LINC00205P59089 165 aa18.02■□□□□ 0.48
TDP1-216ENST00000556867 TAS2R20P59543 309 aa18.02■□□□□ 0.48
TDP1-216ENST00000556867 PDPNQ86YL7 162 aa18.02■□□□□ 0.48
TDP1-216ENST00000556867 FAM110DQ8TAY7 271 aaPredicted RBP18.02■□□□□ 0.48
TDP1-216ENST00000556867 LINC00527Q9UJ94 153 aa18.02■□□□□ 0.48
TDP1-216ENST00000556867 ZNF580Q9UK33 172 aa18.02■□□□□ 0.48
TDP1-216ENST00000556867 OR2W1Q9Y3N9 320 aa18.02■□□□□ 0.48
TDP1-216ENST00000556867 TCRBV4S1A1TA0A5B7 111 aa18.01■□□□□ 0.47
TDP1-216ENST00000556867 APOA1P02647 267 aa18.01■□□□□ 0.47
TDP1-216ENST00000556867 NFYAP23511 347 aaPredicted RBP18.01■□□□□ 0.47
TDP1-216ENST00000556867 SLC35B1P78383 322 aa18.01■□□□□ 0.47
TDP1-216ENST00000556867 ZNF329Q86UD4 541 aa18.01■□□□□ 0.47
TDP1-216ENST00000556867 TSSC4Q9Y5U2 329 aaPredicted RBP18.01■□□□□ 0.47
TDP1-216ENST00000556867 RRHO14718 337 aa18■□□□□ 0.47
TDP1-216ENST00000556867 PLXNB1O43157 2135 aa18■□□□□ 0.47
TDP1-216ENST00000556867 TUSC2O75896 110 aa18■□□□□ 0.47
TDP1-216ENST00000556867 HLA-DQB1P01920 261 aa18■□□□□ 0.47
TDP1-216ENST00000556867 IGKV1-16P04430 117 aa18■□□□□ 0.47
TDP1-216ENST00000556867 IGF1P05019 195 aa18■□□□□ 0.47
TDP1-216ENST00000556867 LUMP51884 338 aaPredicted RBP18■□□□□ 0.47
TDP1-216ENST00000556867 ARPC4P59998 168 aa18■□□□□ 0.47
TDP1-216ENST00000556867 COMMD1Q8N668 190 aa18■□□□□ 0.47
TDP1-216ENST00000556867 OR4F17Q8NGA8 305 aa18■□□□□ 0.47
TDP1-216ENST00000556867 AP3S1Q92572 193 aa18■□□□□ 0.47
TDP1-216ENST00000556867 OR4F4Q96R69 305 aa18■□□□□ 0.47
TDP1-216ENST00000556867 GON7Q9BXV9 100 aa18■□□□□ 0.47
TDP1-216ENST00000556867 SLC35D1Q9NTN3 355 aa18■□□□□ 0.47
TDP1-216ENST00000556867 ZNF182P17025 639 aaPredicted RBP17.99■□□□□ 0.47
TDP1-216ENST00000556867 THBS3P49746 956 aa17.99■□□□□ 0.47
TDP1-216ENST00000556867 TAGLNQ01995 201 aaKnown RBP17.99■□□□□ 0.47
TDP1-216ENST00000556867 LIN54Q6MZP7 749 aa17.99■□□□□ 0.47
TDP1-216ENST00000556867 ZNF645Q8N7E2 425 aa17.99■□□□□ 0.47
TDP1-216ENST00000556867 SNAPC3Q92966 411 aa17.99■□□□□ 0.47
TDP1-216ENST00000556867 ANAPC10Q9UM13 185 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms