RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 GPR12P47775 334 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 F2RL1P55085 397 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 SCAND1P57086 179 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 LINC00205P59089 165 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 ARL6IP1Q15041 203 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 MMDQ15546 238 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 LY6G6FQ5SQ64 297 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 SLC35E3Q7Z769 313 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 CROCCP3Q8IVE0 287 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 GVQW1Q8N7I0 195 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 Q8N9W7 124 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 DRAXINQ8NBI3 349 aaPredicted RBP11.06□□□□□ -0.64
DDX54-210ENST00000552375 OR10J5Q8NHC4 309 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 CHPT1Q8WUD6 406 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 NOL4LQ96MY1 436 aaPredicted RBP11.06□□□□□ -0.64
DDX54-210ENST00000552375 S1PR3Q99500 378 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 ZNF251Q9BRH9 671 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 NECAP2Q9NVZ3 263 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 PIPOXQ9P0Z9 390 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 COMMD3Q9UBI1 195 aa11.06□□□□□ -0.64
DDX54-210ENST00000552375 RBM7Q9Y580 266 aaKnown RBP11.06□□□□□ -0.64
DDX54-210ENST00000552375 RAB29O14966 203 aa11.05□□□□□ -0.64
DDX54-210ENST00000552375 PRB2P02812 416 aaPredicted RBP11.05□□□□□ -0.64
DDX54-210ENST00000552375 TFAP2AP05549 437 aa11.05□□□□□ -0.64
DDX54-210ENST00000552375 EIF4EP06730 217 aaKnown RBP11.05□□□□□ -0.64
DDX54-210ENST00000552375 OR8U9P0C7N5 309 aa11.05□□□□□ -0.64
DDX54-210ENST00000552375 ALDH3B2P48448 385 aa11.05□□□□□ -0.64
DDX54-210ENST00000552375 CTF1Q16619 201 aa11.05□□□□□ -0.64
DDX54-210ENST00000552375 ZNF329Q86UD4 541 aa11.05□□□□□ -0.64
DDX54-210ENST00000552375 ANKRD13BQ86YJ7 626 aa11.05□□□□□ -0.64
DDX54-210ENST00000552375 CLVS1Q8IUQ0 354 aaPredicted RBP11.05□□□□□ -0.64
DDX54-210ENST00000552375 FOXRED2Q8IWF2 684 aa11.05□□□□□ -0.64
DDX54-210ENST00000552375 OR8U1Q8NH10 309 aa11.05□□□□□ -0.64
DDX54-210ENST00000552375 C5orf30Q96GV9 206 aa11.05□□□□□ -0.64
DDX54-210ENST00000552375 RITA1Q96K30 269 aa11.05□□□□□ -0.64
DDX54-210ENST00000552375 DCSTAMPQ9H295 470 aa11.05□□□□□ -0.64
DDX54-210ENST00000552375 DIABLOQ9NR28 239 aa11.05□□□□□ -0.64
DDX54-210ENST00000552375 LIN7CQ9NUP9 197 aaKnown RBP11.05□□□□□ -0.64
DDX54-210ENST00000552375 ZNF221Q9UK13 617 aa11.05□□□□□ -0.64
DDX54-210ENST00000552375 TRBV6-7A0A0A0MS04 114 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 H7C2Y5 167 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 M0R1X1 148 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 CT45A6P0DMU7 189 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 CT45A5P0DMU8 189 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 CT45A7P0DMV0 189 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 ACTBP60709 375 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 RPL23AP62750 156 aaKnown RBP11.04□□□□□ -0.64
DDX54-210ENST00000552375 PNLIPRP3Q17RR3 467 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 TMEM69Q5SWH9 247 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 STPG2Q8N412 459 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 COMMD1Q8N668 190 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 OR8H1Q8NGG4 311 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 RASL11BQ9BPW5 248 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 HSPB9Q9BQS6 159 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 AGMATQ9BSE5 352 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 ABCG5Q9H222 651 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 AUNIPQ9H7T9 357 aa11.04□□□□□ -0.64
DDX54-210ENST00000552375 LINC01548A6NM66 108 aa11.03□□□□□ -0.64
DDX54-210ENST00000552375 AP4M1O00189 453 aa11.03□□□□□ -0.64
DDX54-210ENST00000552375 ITGB1BP1O14713 200 aa11.03□□□□□ -0.64
DDX54-210ENST00000552375 HPGDSO60760 199 aa11.03□□□□□ -0.64
DDX54-210ENST00000552375 IGLL1P15814 213 aa11.03□□□□□ -0.64
DDX54-210ENST00000552375 NFYAP23511 347 aaPredicted RBP11.03□□□□□ -0.64
DDX54-210ENST00000552375 TAS2R20P59543 309 aa11.03□□□□□ -0.64
DDX54-210ENST00000552375 ARPC4P59998 168 aa11.03□□□□□ -0.64
DDX54-210ENST00000552375 SLC35B1P78383 322 aa11.03□□□□□ -0.64
DDX54-210ENST00000552375 RNASE12Q5GAN4 147 aaKnown RBP11.03□□□□□ -0.64
DDX54-210ENST00000552375 FAM71F2Q6NXP2 309 aa11.03□□□□□ -0.64
DDX54-210ENST00000552375 ETV3LQ6ZN32 361 aa11.03□□□□□ -0.64
DDX54-210ENST00000552375 H1FOOQ8IZA3 346 aaPredicted RBP11.03□□□□□ -0.64
DDX54-210ENST00000552375 RCC1LQ96I51 464 aaKnown RBP11.03□□□□□ -0.64
DDX54-210ENST00000552375 PLSCR3Q9NRY6 295 aa11.03□□□□□ -0.64
DDX54-210ENST00000552375 AURKAIP1Q9NWT8 199 aaPredicted RBP11.03□□□□□ -0.64
DDX54-210ENST00000552375 ANXA10Q9UJ72 324 aa11.03□□□□□ -0.64
DDX54-210ENST00000552375 A0A0A6YYH2 397 aa11.02□□□□□ -0.65
DDX54-210ENST00000552375 A6NJ64 397 aa11.02□□□□□ -0.65
DDX54-210ENST00000552375 H0YJW9 148 aa11.02□□□□□ -0.65
DDX54-210ENST00000552375 PROP1O75360 226 aa11.02□□□□□ -0.65
DDX54-210ENST00000552375 SLC6A1P30531 599 aa11.02□□□□□ -0.65
DDX54-210ENST00000552375 PITPNAQ00169 270 aa11.02□□□□□ -0.65
DDX54-210ENST00000552375 SPCS2Q15005 226 aa11.02□□□□□ -0.65
DDX54-210ENST00000552375 FOXB2Q5VYV0 432 aa11.02□□□□□ -0.65
DDX54-210ENST00000552375 Q6ZS49 121 aa11.02□□□□□ -0.65
DDX54-210ENST00000552375 FAM71E2Q8N5Q1 922 aa11.02□□□□□ -0.65
DDX54-210ENST00000552375 LINC00482Q8N8I6 264 aa11.02□□□□□ -0.65
DDX54-210ENST00000552375 ZNF383Q8NA42 475 aa11.02□□□□□ -0.65
DDX54-210ENST00000552375 BEST4Q8NFU0 473 aa11.02□□□□□ -0.65
DDX54-210ENST00000552375 S100A16Q96FQ6 103 aaKnown RBP11.02□□□□□ -0.65
DDX54-210ENST00000552375 IFT46Q9NQC8 304 aa11.02□□□□□ -0.65
DDX54-210ENST00000552375 SDHAF2Q9NX18 166 aa11.02□□□□□ -0.65
DDX54-210ENST00000552375 OR5H14A6NHG9 310 aa11.01□□□□□ -0.65
DDX54-210ENST00000552375 NBR2O15453 112 aa11.01□□□□□ -0.65
DDX54-210ENST00000552375 XRCC3O43542 346 aa11.01□□□□□ -0.65
DDX54-210ENST00000552375 DUS4LO95620 317 aaKnown RBP11.01□□□□□ -0.65
DDX54-210ENST00000552375 RORCP51449 518 aa11.01□□□□□ -0.65
DDX54-210ENST00000552375 PLGLAQ15195 96 aa11.01□□□□□ -0.65
DDX54-210ENST00000552375 SRSF7Q16629 238 aaKnown RBP eCLIP11.01□□□□□ -0.65
DDX54-210ENST00000552375 MRAPQ8TCY5 172 aa11.01□□□□□ -0.65
DDX54-210ENST00000552375 KCTD12Q96CX2 325 aaKnown RBP11.01□□□□□ -0.65
DDX54-210ENST00000552375 TOLLIPQ9H0E2 274 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms