RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 DCSTAMPQ9H295 470 aa16.3■□□□□ 0.2
TRIM35-203ENST00000521253 TRAV18A0A075B6X5 111 aa16.29■□□□□ 0.2
TRIM35-203ENST00000521253 TCRBV4S1A1TA0A5B7 111 aa16.29■□□□□ 0.2
TRIM35-203ENST00000521253 OR5H14A6NHG9 310 aa16.29■□□□□ 0.2
TRIM35-203ENST00000521253 H0YJW9 148 aa16.29■□□□□ 0.2
TRIM35-203ENST00000521253 OR8U9P0C7N5 309 aa16.29■□□□□ 0.2
TRIM35-203ENST00000521253 STPG2Q8N412 459 aa16.29■□□□□ 0.2
TRIM35-203ENST00000521253 OR5AN1Q8NGI8 311 aa16.29■□□□□ 0.2
TRIM35-203ENST00000521253 OR8U1Q8NH10 309 aa16.29■□□□□ 0.2
TRIM35-203ENST00000521253 A0A0A6YYH2 397 aa16.28■□□□□ 0.2
TRIM35-203ENST00000521253 A0A1W2PRX2 142 aa16.28■□□□□ 0.2
TRIM35-203ENST00000521253 A6NJ64 397 aa16.28■□□□□ 0.2
TRIM35-203ENST00000521253 AP4M1O00189 453 aa16.28■□□□□ 0.2
TRIM35-203ENST00000521253 NBR2O15453 112 aa16.28■□□□□ 0.2
TRIM35-203ENST00000521253 KCNAB3O43448 404 aa16.28■□□□□ 0.2
TRIM35-203ENST00000521253 OPN1MWP04001 364 aa16.28■□□□□ 0.2
TRIM35-203ENST00000521253 OPN1MW2P0DN77 364 aa16.28■□□□□ 0.2
TRIM35-203ENST00000521253 OPN1MW3P0DN78 364 aa16.28■□□□□ 0.2
TRIM35-203ENST00000521253 MC5RP33032 325 aa16.28■□□□□ 0.2
TRIM35-203ENST00000521253 SOX6P35712 828 aa16.28■□□□□ 0.2
TRIM35-203ENST00000521253 LINC00205P59089 165 aa16.28■□□□□ 0.2
TRIM35-203ENST00000521253 VBP1P61758 197 aa16.28■□□□□ 0.2
TRIM35-203ENST00000521253 SLC25A46Q96AG3 418 aa16.28■□□□□ 0.2
TRIM35-203ENST00000521253 R3HDM4Q96D70 268 aa16.28■□□□□ 0.2
TRIM35-203ENST00000521253 OR2D2Q9H210 308 aa16.28■□□□□ 0.2
TRIM35-203ENST00000521253 H7C2Y5 167 aa16.27■□□□□ 0.2
TRIM35-203ENST00000521253 TFAP2AP05549 437 aa16.27■□□□□ 0.2
TRIM35-203ENST00000521253 H1FOOQ8IZA3 346 aaPredicted RBP16.27■□□□□ 0.2
TRIM35-203ENST00000521253 ZNF383Q8NA42 475 aa16.27■□□□□ 0.2
TRIM35-203ENST00000521253 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.27■□□□□ 0.2
TRIM35-203ENST00000521253 NPBQ8NG41 125 aa16.27■□□□□ 0.2
TRIM35-203ENST00000521253 OR4F17Q8NGA8 305 aa16.27■□□□□ 0.2
TRIM35-203ENST00000521253 OR4F4Q96R69 305 aa16.27■□□□□ 0.2
TRIM35-203ENST00000521253 DIABLOQ9NR28 239 aa16.27■□□□□ 0.2
TRIM35-203ENST00000521253 WASHC3Q9Y3C0 194 aa16.27■□□□□ 0.2
TRIM35-203ENST00000521253 TSSC4Q9Y5U2 329 aaPredicted RBP16.27■□□□□ 0.2
TRIM35-203ENST00000521253 M0R1X1 148 aa16.26■□□□□ 0.19
TRIM35-203ENST00000521253 NDUFA3O95167 84 aa16.26■□□□□ 0.19
TRIM35-203ENST00000521253 SLC35B1P78383 322 aa16.26■□□□□ 0.19
TRIM35-203ENST00000521253 C5orf64Q2M2E5 130 aa16.26■□□□□ 0.19
TRIM35-203ENST00000521253 KHDC1LQ5JSQ8 128 aa16.26■□□□□ 0.19
TRIM35-203ENST00000521253 C5orf30Q96GV9 206 aa16.26■□□□□ 0.19
TRIM35-203ENST00000521253 MRPS26Q9BYN8 205 aaKnown RBP16.26■□□□□ 0.19
TRIM35-203ENST00000521253 NAA50Q9GZZ1 169 aaKnown RBP16.26■□□□□ 0.19
TRIM35-203ENST00000521253 AUNIPQ9H7T9 357 aa16.26■□□□□ 0.19
TRIM35-203ENST00000521253 SDHAF2Q9NX18 166 aa16.26■□□□□ 0.19
TRIM35-203ENST00000521253 ZNF107Q9UII5 783 aaPredicted RBP16.26■□□□□ 0.19
TRIM35-203ENST00000521253 GAB2Q9UQC2 676 aa16.26■□□□□ 0.19
TRIM35-203ENST00000521253 HLA-DRB1P01911 266 aa16.25■□□□□ 0.19
TRIM35-203ENST00000521253 CTXN2P0C2S0 81 aa16.25■□□□□ 0.19
TRIM35-203ENST00000521253 UBE2NLQ5JXB2 153 aa16.25■□□□□ 0.19
TRIM35-203ENST00000521253 CNIH2Q6PI25 160 aa16.25■□□□□ 0.19
TRIM35-203ENST00000521253 SAMD12Q8N8I0 201 aa16.25■□□□□ 0.19
TRIM35-203ENST00000521253 KIAA1456Q9P272 454 aa16.25■□□□□ 0.19
TRIM35-203ENST00000521253 ANXA10Q9UJ72 324 aa16.25■□□□□ 0.19
TRIM35-203ENST00000521253 RBM7Q9Y580 266 aaKnown RBP16.25■□□□□ 0.19
TRIM35-203ENST00000521253 RBBP9O75884 186 aa16.24■□□□□ 0.19
TRIM35-203ENST00000521253 IGKV1-16P04430 117 aa16.24■□□□□ 0.19
TRIM35-203ENST00000521253 PTHLHP12272 177 aa16.24■□□□□ 0.19
TRIM35-203ENST00000521253 ANKRD13BQ86YJ7 626 aa16.24■□□□□ 0.19
TRIM35-203ENST00000521253 GVQW1Q8N7I0 195 aa16.24■□□□□ 0.19
TRIM35-203ENST00000521253 KCTD12Q96CX2 325 aaKnown RBP16.24■□□□□ 0.19
TRIM35-203ENST00000521253 S100A16Q96FQ6 103 aaKnown RBP16.24■□□□□ 0.19
TRIM35-203ENST00000521253 RRHO14718 337 aa16.23■□□□□ 0.19
TRIM35-203ENST00000521253 XRCC3O43542 346 aa16.23■□□□□ 0.19
TRIM35-203ENST00000521253 GABARAPO95166 117 aa16.23■□□□□ 0.19
TRIM35-203ENST00000521253 APOA2P02652 100 aa16.23■□□□□ 0.19
TRIM35-203ENST00000521253 IGF1P05019 195 aa16.23■□□□□ 0.19
TRIM35-203ENST00000521253 NFYAP23511 347 aaPredicted RBP16.23■□□□□ 0.19
TRIM35-203ENST00000521253 CTF1Q16619 201 aa16.23■□□□□ 0.19
TRIM35-203ENST00000521253 LIN54Q6MZP7 749 aa16.23■□□□□ 0.19
TRIM35-203ENST00000521253 COMMD1Q8N668 190 aa16.23■□□□□ 0.19
TRIM35-203ENST00000521253 RNF5Q99942 180 aa16.23■□□□□ 0.19
TRIM35-203ENST00000521253 GON7Q9BXV9 100 aa16.23■□□□□ 0.19
TRIM35-203ENST00000521253 FBXL15Q9H469 300 aa16.23■□□□□ 0.19
TRIM35-203ENST00000521253 IGHV7-81A0A0B4J1V7 117 aa16.22■□□□□ 0.19
TRIM35-203ENST00000521253 J3QRK9 145 aa16.22■□□□□ 0.19
TRIM35-203ENST00000521253 PF4V1P10720 104 aa16.22■□□□□ 0.19
TRIM35-203ENST00000521253 ALDH3B2P48448 385 aa16.22■□□□□ 0.19
TRIM35-203ENST00000521253 GPR107Q5VW38 600 aa16.22■□□□□ 0.19
TRIM35-203ENST00000521253 TEX38Q6PEX7 206 aa16.22■□□□□ 0.19
TRIM35-203ENST00000521253 HOGA1Q86XE5 327 aa16.22■□□□□ 0.19
TRIM35-203ENST00000521253 PDPNQ86YL7 162 aa16.22■□□□□ 0.19
TRIM35-203ENST00000521253 BEST4Q8NFU0 473 aa16.22■□□□□ 0.19
TRIM35-203ENST00000521253 OR51J1Q9H342 316 aa16.22■□□□□ 0.19
TRIM35-203ENST00000521253 SLC35D1Q9NTN3 355 aa16.22■□□□□ 0.19
TRIM35-203ENST00000521253 COMMD3Q9UBI1 195 aa16.22■□□□□ 0.19
TRIM35-203ENST00000521253 OR2W1Q9Y3N9 320 aa16.22■□□□□ 0.19
TRIM35-203ENST00000521253 VDAC1P21796 283 aa16.21■□□□□ 0.19
TRIM35-203ENST00000521253 RPL23AP62750 156 aaKnown RBP16.21■□□□□ 0.19
TRIM35-203ENST00000521253 CFHR3Q02985 330 aa16.21■□□□□ 0.19
TRIM35-203ENST00000521253 TMEM69Q5SWH9 247 aa16.21■□□□□ 0.19
TRIM35-203ENST00000521253 ZNF580Q9UK33 172 aa16.21■□□□□ 0.19
TRIM35-203ENST00000521253 FCN1O00602 326 aa16.2■□□□□ 0.18
TRIM35-203ENST00000521253 ATP6V0E1O15342 81 aa16.2■□□□□ 0.18
TRIM35-203ENST00000521253 HLA-DQB1P01920 261 aa16.2■□□□□ 0.18
TRIM35-203ENST00000521253 FCER2P06734 321 aa16.2■□□□□ 0.18
TRIM35-203ENST00000521253 LUMP51884 338 aaPredicted RBP16.2■□□□□ 0.18
TRIM35-203ENST00000521253 TAS2R20P59543 309 aa16.2■□□□□ 0.18
TRIM35-203ENST00000521253 ARPC4P59998 168 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms