RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ABCG5Q9H222 651 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 BANF2Q9H503 90 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 IL36GQ9NZH8 169 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 STEAP1Q9UHE8 339 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 POLDIP2Q9Y2S7 368 aa6.97□□□□□ -1.29
NUP54-211ENST00000512151 A0A0A6YYD4 124 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 TMEM272A0A1B0GTI8 110 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 FABP12A6NFH5 140 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 IGKV1D-33P01593 117 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 IGKV1-33P01594 117 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 IGLV1-51P01701 117 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 IL7P13232 177 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 PRKACAP17612 351 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 DUSP1P28562 367 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 RSU1Q15404 277 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 PIGYQ3MUY2 71 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 SLC22A6Q4U2R8 563 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 CCDC144NLQ6NUI1 221 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 Q6P435 159 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 CEMP1Q6PRD7 247 aaPredicted RBP6.96□□□□□ -1.29
NUP54-211ENST00000512151 FAM131AQ6UXB0 335 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 CADM3Q8N126 398 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 FAM58AQ8N1B3 248 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 Q8N9W7 124 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 OR51T1Q8NGJ9 327 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 EMG1Q92979 244 aaKnown RBP6.96□□□□□ -1.29
NUP54-211ENST00000512151 TOMM40LQ969M1 308 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 FAM46BQ96A09 425 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 FAM3DQ96BQ1 224 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 CPNE2Q96FN4 548 aaPredicted RBP6.96□□□□□ -1.29
NUP54-211ENST00000512151 DIRAS2Q96HU8 199 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 SNX22Q96L94 193 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 GON7Q9BXV9 100 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 TUBA4BQ9H853 241 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 TPSG1Q9NRR2 321 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 ADAM30Q9UKF2 790 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 TBC1D24Q9ULP9 559 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 VSIG4Q9Y279 399 aa6.96□□□□□ -1.29
NUP54-211ENST00000512151 UBE2J1Q9Y385 318 aaPredicted RBP6.96□□□□□ -1.29
NUP54-211ENST00000512151 IGHV4OR15-8A0A075B7B6 117 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 A0A087WW49 117 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 NUPR2A6NF83 97 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 BPNT1O95861 308 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 CYB5AP00167 134 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 HLA-DQB1P01920 261 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 APOA1P02647 267 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 OR8U9P0C7N5 309 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 SCN1BQ07699 218 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 ASAH1Q13510 395 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 ZNF146Q15072 292 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 BAK1Q16611 211 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 LGALS9CQ6DKI2 356 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 HEPN1Q6WQI6 88 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 Q8N6K4 173 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 LGALS14Q8TCE9 139 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 RPEQ96AT9 228 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 NICN1Q9BSH3 213 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 LPAR5Q9H1C0 372 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 GHITMQ9H3K2 345 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 PLSCR3Q9NRY6 295 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 GHRLQ9UBU3 117 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 PKD1P98161 4303 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 FOXI3A8MTJ6 420 aaPredicted RBP6.95□□□□□ -1.3
NUP54-211ENST00000512151 LINC01619G3V211 115 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 BOLA2-SMG1P6H3BVE0 249 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 TOR1AO14656 332 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 GEMIN2O14893 280 aaKnown RBP6.95□□□□□ -1.3
NUP54-211ENST00000512151 ZNF780AO75290 641 aaPredicted RBP6.95□□□□□ -1.3
NUP54-211ENST00000512151 CRTAPO75718 401 aaPredicted RBP6.95□□□□□ -1.3
NUP54-211ENST00000512151 CSTBP04080 98 aaKnown RBP6.95□□□□□ -1.3
NUP54-211ENST00000512151 UBBP0CG47 229 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 MGMTP16455 207 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 VDAC1P21796 283 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 RBM11P57052 281 aaKnown RBP6.95□□□□□ -1.3
NUP54-211ENST00000512151 RPS27AP62979 156 aaKnown RBP6.95□□□□□ -1.3
NUP54-211ENST00000512151 EBI3Q14213 229 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 GRK1Q15835 563 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 MOGAT2Q3SYC2 334 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 NHLRC3Q5JS37 347 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 SIGIRRQ6IA17 410 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 OR52W1Q6IF63 320 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 CNIH2Q6PI25 160 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 TRAPPC6BQ86SZ2 158 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 TGIF2LXQ8IUE1 241 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 Q8IYB0 196 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 CREB3L1Q96BA8 519 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 SLC25A38Q96DW6 304 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 EAF1Q96JC9 268 aaPredicted RBP6.95□□□□□ -1.3
NUP54-211ENST00000512151 Q96M66 194 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 OR4C12Q96R67 309 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 S100A13Q99584 98 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 TM2D1Q9BX74 207 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 SELENOIQ9C0D9 397 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 RHOFQ9HBH0 211 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 LIN7CQ9NUP9 197 aaKnown RBP6.95□□□□□ -1.3
NUP54-211ENST00000512151 ABRACLQ9P1F3 81 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 COMMD3Q9UBI1 195 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 SPATA2Q9UM82 520 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 ST3GAL6Q9Y274 331 aa6.95□□□□□ -1.3
NUP54-211ENST00000512151 IGHV3-72A0A0B4J1Y9 119 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms