RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 RBMXL1Q96E39 390 aaKnown RBP20■□□□□ 0.79
PVT1-201ENST00000504719 S1PR3Q99500 378 aa20■□□□□ 0.79
PVT1-201ENST00000504719 CABLES2Q9BTV7 478 aa20■□□□□ 0.79
PVT1-201ENST00000504719 ST6GALNAC5Q9BVH7 336 aa20■□□□□ 0.79
PVT1-201ENST00000504719 C11orf54Q9H0W9 315 aaPredicted RBP20■□□□□ 0.79
PVT1-201ENST00000504719 IGKV1D-8A0A087WSZ0 117 aa19.99■□□□□ 0.79
PVT1-201ENST00000504719 ITGB1BP1O14713 200 aa19.99■□□□□ 0.79
PVT1-201ENST00000504719 SSX5O60225 188 aa19.99■□□□□ 0.79
PVT1-201ENST00000504719 CD33P20138 364 aa19.99■□□□□ 0.79
PVT1-201ENST00000504719 GPR12P47775 334 aa19.99■□□□□ 0.79
PVT1-201ENST00000504719 Q6ZS49 121 aa19.99■□□□□ 0.79
PVT1-201ENST00000504719 ZNF833PQ6ZTB9 187 aa19.99■□□□□ 0.79
PVT1-201ENST00000504719 STPG2Q8N412 459 aa19.99■□□□□ 0.79
PVT1-201ENST00000504719 S100A16Q96FQ6 103 aaKnown RBP19.99■□□□□ 0.79
PVT1-201ENST00000504719 RASL11BQ9BPW5 248 aa19.99■□□□□ 0.79
PVT1-201ENST00000504719 DCSTAMPQ9H295 470 aa19.99■□□□□ 0.79
PVT1-201ENST00000504719 RDH8Q9NYR8 311 aa19.99■□□□□ 0.79
PVT1-201ENST00000504719 PIPOXQ9P0Z9 390 aa19.99■□□□□ 0.79
PVT1-201ENST00000504719 PF4P02776 101 aa19.98■□□□□ 0.79
PVT1-201ENST00000504719 RORCP51449 518 aa19.98■□□□□ 0.79
PVT1-201ENST00000504719 F2RL1P55085 397 aa19.98■□□□□ 0.79
PVT1-201ENST00000504719 SLC35B1P78383 322 aa19.98■□□□□ 0.79
PVT1-201ENST00000504719 CLVS1Q8IUQ0 354 aaPredicted RBP19.98■□□□□ 0.79
PVT1-201ENST00000504719 OR10J5Q8NHC4 309 aa19.98■□□□□ 0.79
PVT1-201ENST00000504719 ABHD14BQ96IU4 210 aa19.98■□□□□ 0.79
PVT1-201ENST00000504719 AGMATQ9BSE5 352 aa19.98■□□□□ 0.79
PVT1-201ENST00000504719 COMMD3Q9UBI1 195 aa19.98■□□□□ 0.79
PVT1-201ENST00000504719 DNAH3Q8TD57 4116 aa19.97■□□□□ 0.79
PVT1-201ENST00000504719 TRBV6-7A0A0A0MS04 114 aa19.97■□□□□ 0.79
PVT1-201ENST00000504719 AP4M1O00189 453 aa19.97■□□□□ 0.79
PVT1-201ENST00000504719 RAB29O14966 203 aa19.97■□□□□ 0.79
PVT1-201ENST00000504719 RPL5P46777 297 aaKnown RBP19.97■□□□□ 0.79
PVT1-201ENST00000504719 FAM71E2Q8N5Q1 922 aa19.97■□□□□ 0.79
PVT1-201ENST00000504719 MRPL20Q9BYC9 149 aaKnown RBP19.97■□□□□ 0.79
PVT1-201ENST00000504719 AUNIPQ9H7T9 357 aa19.97■□□□□ 0.79
PVT1-201ENST00000504719 XRCC3O43542 346 aa19.96■□□□□ 0.79
PVT1-201ENST00000504719 DIRAS3O95661 229 aa19.96■□□□□ 0.79
PVT1-201ENST00000504719 RPL23AP62750 156 aaKnown RBP19.96■□□□□ 0.79
PVT1-201ENST00000504719 RPL39P5Q59GN2 51 aa19.96■□□□□ 0.79
PVT1-201ENST00000504719 COMMD1Q8N668 190 aa19.96■□□□□ 0.79
PVT1-201ENST00000504719 NABP2Q9BQ15 211 aa19.96■□□□□ 0.79
PVT1-201ENST00000504719 ZNF251Q9BRH9 671 aa19.96■□□□□ 0.79
PVT1-201ENST00000504719 TOLLIPQ9H0E2 274 aa19.96■□□□□ 0.79
PVT1-201ENST00000504719 RNF150Q9ULK6 438 aa19.96■□□□□ 0.79
PVT1-201ENST00000504719 TGP01266 2768 aa19.95■□□□□ 0.78
PVT1-201ENST00000504719 PRB2P02812 416 aaPredicted RBP19.95■□□□□ 0.78
PVT1-201ENST00000504719 PTHLHP12272 177 aa19.95■□□□□ 0.78
PVT1-201ENST00000504719 FAM71F2Q6NXP2 309 aa19.95■□□□□ 0.78
PVT1-201ENST00000504719 ACOT12Q8WYK0 555 aa19.95■□□□□ 0.78
PVT1-201ENST00000504719 GINS4Q9BRT9 223 aa19.95■□□□□ 0.78
PVT1-201ENST00000504719 GHITMQ9H3K2 345 aa19.95■□□□□ 0.78
PVT1-201ENST00000504719 ZFP57Q9NU63 452 aa19.95■□□□□ 0.78
PVT1-201ENST00000504719 EIF4EP06730 217 aaKnown RBP19.94■□□□□ 0.78
PVT1-201ENST00000504719 IGLL1P15814 213 aa19.94■□□□□ 0.78
PVT1-201ENST00000504719 TMEM69Q5SWH9 247 aa19.94■□□□□ 0.78
PVT1-201ENST00000504719 HSPB9Q9BQS6 159 aa19.94■□□□□ 0.78
PVT1-201ENST00000504719 SCOCQ9UIL1 159 aa19.94■□□□□ 0.78
PVT1-201ENST00000504719 SPCS2Q15005 226 aa19.93■□□□□ 0.78
PVT1-201ENST00000504719 TEX38Q6PEX7 206 aa19.93■□□□□ 0.78
PVT1-201ENST00000504719 C18orf65Q6ZTR6 163 aa19.93■□□□□ 0.78
PVT1-201ENST00000504719 REC114Q7Z4M0 266 aa19.93■□□□□ 0.78
PVT1-201ENST00000504719 RAB2BQ8WUD1 216 aa19.93■□□□□ 0.78
PVT1-201ENST00000504719 ZNF221Q9UK13 617 aa19.93■□□□□ 0.78
PVT1-201ENST00000504719 OR8U9P0C7N5 309 aa19.92■□□□□ 0.78
PVT1-201ENST00000504719 ZNF182P17025 639 aaPredicted RBP19.92■□□□□ 0.78
PVT1-201ENST00000504719 SOX6P35712 828 aa19.92■□□□□ 0.78
PVT1-201ENST00000504719 TMBIM6P55061 237 aa19.92■□□□□ 0.78
PVT1-201ENST00000504719 TAS2R20P59543 309 aa19.92■□□□□ 0.78
PVT1-201ENST00000504719 MMDQ15546 238 aa19.92■□□□□ 0.78
PVT1-201ENST00000504719 ETV3LQ6ZN32 361 aa19.92■□□□□ 0.78
PVT1-201ENST00000504719 GVQW1Q8N7I0 195 aa19.92■□□□□ 0.78
PVT1-201ENST00000504719 OR8U1Q8NH10 309 aa19.92■□□□□ 0.78
PVT1-201ENST00000504719 AP3S1Q92572 193 aa19.92■□□□□ 0.78
PVT1-201ENST00000504719 RITA1Q96K30 269 aa19.92■□□□□ 0.78
PVT1-201ENST00000504719 GON7Q9BXV9 100 aa19.92■□□□□ 0.78
PVT1-201ENST00000504719 NECAP2Q9NVZ3 263 aa19.92■□□□□ 0.78
PVT1-201ENST00000504719 ANXA10Q9UJ72 324 aa19.92■□□□□ 0.78
PVT1-201ENST00000504719 HPGDSO60760 199 aa19.91■□□□□ 0.78
PVT1-201ENST00000504719 APOA1P02647 267 aa19.91■□□□□ 0.78
PVT1-201ENST00000504719 CTXN2P0C2S0 81 aa19.91■□□□□ 0.78
PVT1-201ENST00000504719 CT45A6P0DMU7 189 aa19.91■□□□□ 0.78
PVT1-201ENST00000504719 CT45A5P0DMU8 189 aa19.91■□□□□ 0.78
PVT1-201ENST00000504719 CT45A7P0DMV0 189 aa19.91■□□□□ 0.78
PVT1-201ENST00000504719 ACTBP60709 375 aa19.91■□□□□ 0.78
PVT1-201ENST00000504719 MZT2AQ6P582 158 aa19.91■□□□□ 0.78
PVT1-201ENST00000504719 CNIH2Q6PI25 160 aa19.91■□□□□ 0.78
PVT1-201ENST00000504719 H1FOOQ8IZA3 346 aaPredicted RBP19.91■□□□□ 0.78
PVT1-201ENST00000504719 RCC1LQ96I51 464 aaKnown RBP19.91■□□□□ 0.78
PVT1-201ENST00000504719 CMTM3Q96MX0 182 aa19.91■□□□□ 0.78
PVT1-201ENST00000504719 CNTFRP26992 372 aa19.9■□□□□ 0.78
PVT1-201ENST00000504719 SLC6A1P30531 599 aa19.9■□□□□ 0.78
PVT1-201ENST00000504719 THBS3P49746 956 aa19.9■□□□□ 0.78
PVT1-201ENST00000504719 FOXB2Q5VYV0 432 aa19.9■□□□□ 0.78
PVT1-201ENST00000504719 C8orf86Q6ZUL3 223 aa19.9■□□□□ 0.78
PVT1-201ENST00000504719 HOGA1Q86XE5 327 aa19.9■□□□□ 0.78
PVT1-201ENST00000504719 LINC00482Q8N8I6 264 aa19.9■□□□□ 0.78
PVT1-201ENST00000504719 BEST4Q8NFU0 473 aa19.9■□□□□ 0.78
PVT1-201ENST00000504719 OR2D2Q9H210 308 aa19.9■□□□□ 0.78
PVT1-201ENST00000504719 RBM7Q9Y580 266 aaKnown RBP19.9■□□□□ 0.78
PVT1-201ENST00000504719 MEIS3P1A6NDR6 274 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms