RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 TREML4Q6UXN2 200 aa8.12□□□□□ -1.11
NEK4-204ENST00000487068 DRAXINQ8NBI3 349 aaPredicted RBP8.12□□□□□ -1.11
NEK4-204ENST00000487068 OR8U1Q8NH10 309 aa8.12□□□□□ -1.11
NEK4-204ENST00000487068 FAM110DQ8TAY7 271 aaPredicted RBP8.12□□□□□ -1.11
NEK4-204ENST00000487068 SLC25A46Q96AG3 418 aa8.12□□□□□ -1.11
NEK4-204ENST00000487068 S100A16Q96FQ6 103 aaKnown RBP8.12□□□□□ -1.11
NEK4-204ENST00000487068 NAA50Q9GZZ1 169 aaKnown RBP8.12□□□□□ -1.11
NEK4-204ENST00000487068 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.12□□□□□ -1.11
NEK4-204ENST00000487068 LIN7CQ9NUP9 197 aaKnown RBP8.12□□□□□ -1.11
NEK4-204ENST00000487068 COMMD3Q9UBI1 195 aa8.12□□□□□ -1.11
NEK4-204ENST00000487068 LINC00527Q9UJ94 153 aa8.12□□□□□ -1.11
NEK4-204ENST00000487068 TRBV6-7A0A0A0MS04 114 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 A0A0A6YYH2 397 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 PSMB11A5LHX3 300 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 MEIS3P1A6NDR6 274 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 OR5H14A6NHG9 310 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 A6NJ64 397 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 FAM25AB3EWG3 89 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 FAM25CB3EWG5 89 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 FAM25GB3EWG6 89 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 ITGB1BP1O14713 200 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 NBR2O15453 112 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 GABARAPO95166 117 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 TSPAN15O95858 294 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 AMY1AP04745 511 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 AMY2AP04746 511 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 ACTBP60709 375 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 SLC35B1P78383 322 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 ANKRD13BQ86YJ7 626 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 OR5AU1Q8NGC0 362 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 OR8H1Q8NGG4 311 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 ABHD5Q8WTS1 349 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 AP3S1Q92572 193 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 ANAPC16Q96DE5 110 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 DCSTAMPQ9H295 470 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 GHITMQ9H3K2 345 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 WASHC3Q9Y3C0 194 aa8.11□□□□□ -1.11
NEK4-204ENST00000487068 hCG_2014768A0A024R1R8 64 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 IGKV1D-8A0A087WSZ0 117 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 SMIM31A0A1B0GVY4 71 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 SSX5O60225 188 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 DIRAS3O95661 229 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 TFAP2AP05549 437 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 CTXN2P0C2S0 81 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 PTHLHP12272 177 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 MC5RP33032 325 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 SOX6P35712 828 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 RORCP51449 518 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 F2RL1P55085 397 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 TAS2R20P59543 309 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 EBI3Q14213 229 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 MZT2AQ6P582 158 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 CLVS1Q8IUQ0 354 aaPredicted RBP8.1□□□□□ -1.11
NEK4-204ENST00000487068 Q8N6K4 173 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 Q8N9W7 124 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 BEST4Q8NFU0 473 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 CHPT1Q8WUD6 406 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 NOL4LQ96MY1 436 aaPredicted RBP8.1□□□□□ -1.11
NEK4-204ENST00000487068 CITED2Q99967 270 aaPredicted RBP8.1□□□□□ -1.11
NEK4-204ENST00000487068 AGMATQ9BSE5 352 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 WNT10AQ9GZT5 417 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 MMP27Q9H306 513 aa8.1□□□□□ -1.11
NEK4-204ENST00000487068 ZNF107Q9UII5 783 aaPredicted RBP8.1□□□□□ -1.11
NEK4-204ENST00000487068 TCRBV4S1A1TA0A5B7 111 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 H0YJW9 148 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 AP4M1O00189 453 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 XRCC3O43542 346 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 OPN1MWP04001 364 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 EIF4EP06730 217 aaKnown RBP8.09□□□□□ -1.11
NEK4-204ENST00000487068 CT45A6P0DMU7 189 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 CT45A5P0DMU8 189 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 CT45A7P0DMV0 189 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 OPN1MW2P0DN77 364 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 OPN1MW3P0DN78 364 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 PF4V1P10720 104 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 VDAC1P21796 283 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 NFYAP23511 347 aaPredicted RBP8.09□□□□□ -1.11
NEK4-204ENST00000487068 CNTFRP26992 372 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 CBX5P45973 191 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 LUMP51884 338 aaPredicted RBP8.09□□□□□ -1.11
NEK4-204ENST00000487068 SRSF7Q16629 238 aaKnown RBP eCLIP8.09□□□□□ -1.11
NEK4-204ENST00000487068 CNIH2Q6PI25 160 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 Q6ZS49 121 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 ZNF329Q86UD4 541 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 NDUFA11Q86Y39 141 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 H1FOOQ8IZA3 346 aaPredicted RBP8.09□□□□□ -1.11
NEK4-204ENST00000487068 FAM71E2Q8N5Q1 922 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 GVQW1Q8N7I0 195 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.09□□□□□ -1.11
NEK4-204ENST00000487068 ACOT12Q8WYK0 555 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 R3HDM4Q96D70 268 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 ABCG5Q9H222 651 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 AUNIPQ9H7T9 357 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 PARP11Q9NR21 331 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 SLC35D1Q9NTN3 355 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 ANXA10Q9UJ72 324 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 MRPS7Q9Y2R9 242 aaKnown RBP8.09□□□□□ -1.11
NEK4-204ENST00000487068 TRRAPQ9Y4A5 3859 aa8.09□□□□□ -1.11
NEK4-204ENST00000487068 TGP01266 2768 aa8.08□□□□□ -1.12
NEK4-204ENST00000487068 CCDC160A6NGH7 325 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms