RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 ANXA10Q9UJ72 324 aa10.62□□□□□ -0.71
SSR1-208ENST00000483409 RBM7Q9Y580 266 aaKnown RBP10.62□□□□□ -0.71
SSR1-208ENST00000483409 CMYA5Q8N3K9 4069 aa10.62□□□□□ -0.71
SSR1-208ENST00000483409 OR5H14A6NHG9 310 aa10.61□□□□□ -0.71
SSR1-208ENST00000483409 H0YJW9 148 aa10.61□□□□□ -0.71
SSR1-208ENST00000483409 H7C2Y5 167 aa10.61□□□□□ -0.71
SSR1-208ENST00000483409 M0QZ24 198 aa10.61□□□□□ -0.71
SSR1-208ENST00000483409 HPGDSO60760 199 aa10.61□□□□□ -0.71
SSR1-208ENST00000483409 NFYAP23511 347 aaPredicted RBP10.61□□□□□ -0.71
SSR1-208ENST00000483409 CNTFRP26992 372 aa10.61□□□□□ -0.71
SSR1-208ENST00000483409 SPCS2Q15005 226 aa10.61□□□□□ -0.71
SSR1-208ENST00000483409 PRR31Q5SQ13 230 aa10.61□□□□□ -0.71
SSR1-208ENST00000483409 CNIH2Q6PI25 160 aa10.61□□□□□ -0.71
SSR1-208ENST00000483409 SLC35E3Q7Z769 313 aa10.61□□□□□ -0.71
SSR1-208ENST00000483409 CENPVQ7Z7K6 275 aaPredicted RBP10.61□□□□□ -0.71
SSR1-208ENST00000483409 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.61□□□□□ -0.71
SSR1-208ENST00000483409 BEST4Q8NFU0 473 aa10.61□□□□□ -0.71
SSR1-208ENST00000483409 OR8H1Q8NGG4 311 aa10.61□□□□□ -0.71
SSR1-208ENST00000483409 ACOT12Q8WYK0 555 aa10.61□□□□□ -0.71
SSR1-208ENST00000483409 C5orf30Q96GV9 206 aa10.61□□□□□ -0.71
SSR1-208ENST00000483409 RASL11BQ9BPW5 248 aa10.61□□□□□ -0.71
SSR1-208ENST00000483409 LIN7CQ9NUP9 197 aaKnown RBP10.61□□□□□ -0.71
SSR1-208ENST00000483409 SDHAF2Q9NX18 166 aa10.61□□□□□ -0.71
SSR1-208ENST00000483409 APOA1P02647 267 aa10.6□□□□□ -0.71
SSR1-208ENST00000483409 CTXN2P0C2S0 81 aa10.6□□□□□ -0.71
SSR1-208ENST00000483409 ZNF182P17025 639 aaPredicted RBP10.6□□□□□ -0.71
SSR1-208ENST00000483409 RPL5P46777 297 aaKnown RBP10.6□□□□□ -0.71
SSR1-208ENST00000483409 ARPC4P59998 168 aa10.6□□□□□ -0.71
SSR1-208ENST00000483409 C10orf99Q6UWK7 81 aa10.6□□□□□ -0.71
SSR1-208ENST00000483409 HOGA1Q86XE5 327 aa10.6□□□□□ -0.71
SSR1-208ENST00000483409 FAM71E2Q8N5Q1 922 aa10.6□□□□□ -0.71
SSR1-208ENST00000483409 ZNF383Q8NA42 475 aa10.6□□□□□ -0.71
SSR1-208ENST00000483409 OR5AU1Q8NGC0 362 aa10.6□□□□□ -0.71
SSR1-208ENST00000483409 OR5AN1Q8NGI8 311 aa10.6□□□□□ -0.71
SSR1-208ENST00000483409 RAB2BQ8WUD1 216 aa10.6□□□□□ -0.71
SSR1-208ENST00000483409 AP3S1Q92572 193 aa10.6□□□□□ -0.71
SSR1-208ENST00000483409 NOL4LQ96MY1 436 aaPredicted RBP10.6□□□□□ -0.71
SSR1-208ENST00000483409 HSPB9Q9BQS6 159 aa10.6□□□□□ -0.71
SSR1-208ENST00000483409 LINC00527Q9UJ94 153 aa10.6□□□□□ -0.71
SSR1-208ENST00000483409 MRPS7Q9Y2R9 242 aaKnown RBP10.6□□□□□ -0.71
SSR1-208ENST00000483409 WASHC3Q9Y3C0 194 aa10.6□□□□□ -0.71
SSR1-208ENST00000483409 LINC01548A6NM66 108 aa10.59□□□□□ -0.71
SSR1-208ENST00000483409 NBR2O15453 112 aa10.59□□□□□ -0.71
SSR1-208ENST00000483409 TSPAN15O95858 294 aa10.59□□□□□ -0.71
SSR1-208ENST00000483409 IGHG2P01859 326 aa10.59□□□□□ -0.71
SSR1-208ENST00000483409 ELK1P19419 428 aa10.59□□□□□ -0.71
SSR1-208ENST00000483409 C2orf68Q2NKX9 166 aa10.59□□□□□ -0.71
SSR1-208ENST00000483409 NSUN5P1Q3KNT7 163 aa10.59□□□□□ -0.71
SSR1-208ENST00000483409 MZT2AQ6P582 158 aa10.59□□□□□ -0.71
SSR1-208ENST00000483409 SNAPC3Q92966 411 aa10.59□□□□□ -0.71
SSR1-208ENST00000483409 CMTM3Q96MX0 182 aa10.59□□□□□ -0.71
SSR1-208ENST00000483409 CITED2Q99967 270 aaPredicted RBP10.59□□□□□ -0.71
SSR1-208ENST00000483409 IFT46Q9NQC8 304 aa10.59□□□□□ -0.71
SSR1-208ENST00000483409 SCOCQ9UIL1 159 aa10.59□□□□□ -0.71
SSR1-208ENST00000483409 IGKV1D-13A0A0B4J2D9 117 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 SMIM31A0A1B0GVY4 71 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 PSMB11A5LHX3 300 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 FAM25AB3EWG3 89 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 FAM25CB3EWG5 89 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 FAM25GB3EWG6 89 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 NOL3O60936 208 aaKnown RBP10.58□□□□□ -0.72
SSR1-208ENST00000483409 APOA2P02652 100 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 CSF1P09603 554 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 IGKV1-13P0DP09 117 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 MC5RP33032 325 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 SOX6P35712 828 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 CBX5P45973 191 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 LUMP51884 338 aaPredicted RBP10.58□□□□□ -0.72
SSR1-208ENST00000483409 TMBIM6P55061 237 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 TREML4Q6UXN2 200 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 ZNF329Q86UD4 541 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 FOXRED2Q8IWF2 684 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 KIAA1456Q9P272 454 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 GAB2Q9UQC2 676 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 OR2W1Q9Y3N9 320 aa10.58□□□□□ -0.72
SSR1-208ENST00000483409 A0A1W2PRX2 142 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 KCNAB3O43448 404 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 HLA-DQB1P01920 261 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 IGKV1-16P04430 117 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 PRSS3P35030 304 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 C5orf64Q2M2E5 130 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 TCTEX1D4Q5JR98 221 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 SNX29P2Q8IUI4 249 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 STPG2Q8N412 459 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 ZNF645Q8N7E2 425 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 NPBQ8NG41 125 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 OR4X2Q8NGF9 303 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 FAM110DQ8TAY7 271 aaPredicted RBP10.57□□□□□ -0.72
SSR1-208ENST00000483409 CHPT1Q8WUD6 406 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 BCL7BQ9BQE9 202 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 FBXL15Q9H469 300 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 SLC35D1Q9NTN3 355 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 NECAP2Q9NVZ3 263 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 ZNF107Q9UII5 783 aaPredicted RBP10.57□□□□□ -0.72
SSR1-208ENST00000483409 PKD1L1Q8TDX9 2849 aa10.57□□□□□ -0.72
SSR1-208ENST00000483409 FBN3Q75N90 2809 aa10.56□□□□□ -0.72
SSR1-208ENST00000483409 TCRBV4S1A1TA0A5B7 111 aa10.56□□□□□ -0.72
SSR1-208ENST00000483409 H3BMQ9 156 aa10.56□□□□□ -0.72
SSR1-208ENST00000483409 AP4M1O00189 453 aa10.56□□□□□ -0.72
SSR1-208ENST00000483409 RRHO14718 337 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms