RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 RAB11BQ15907 218 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 CTF1Q16619 201 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 C2orf76Q3KRA6 126 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 PLAC9Q5JTB6 97 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 C22orf42Q6IC83 251 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 LCNL1Q6ZST4 164 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 C4orf3Q8WVX3 66 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 FAM3DQ96BQ1 224 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 UBE2E2Q96LR5 201 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 KRTAP3-3Q9BYR6 98 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 KRTAP3-2Q9BYR7 98 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 C11orf54Q9H0W9 315 aaPredicted RBP7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 KLK15Q9H2R5 256 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 OR51J1Q9H342 316 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 STEAP1Q9UHE8 339 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 MGAT4AQ9UM21 535 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 KCNK7Q9Y2U2 307 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 NBEAL2Q6ZNJ1 2754 aa7.58□□□□□ -1.2
TMEM39A-207ENST00000482162 IGKV1-6A0A0C4DH72 117 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 SHISA3A0PJX4 238 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 OR5H14A6NHG9 310 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 NUDT19A8MXV4 375 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 G3V318 75 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 H0YJW9 148 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 NBR2O15453 112 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 ST8SIA5O15466 376 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 SCTP09683 121 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 EGR2P11161 476 aaPredicted RBP7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 VDAC1P21796 283 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 CALRP27797 417 aaKnown RBP7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 HOXD3P31249 432 aaPredicted RBP7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 MC5RP33032 325 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 LSM3P62310 102 aaKnown RBP7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 ZNF660Q6AZW8 331 aaPredicted RBP7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 LIN54Q6MZP7 749 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 TPRA1Q86W33 373 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 ZNF491Q8N8L2 437 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 OR8U1Q8NH10 309 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 ARHGAP5-AS1Q96IT6 56 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 HDHD3Q9BSH5 251 aaPredicted RBP7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 CENPOQ9BU64 300 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 PECRQ9BY49 303 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 PLGRKTQ9HBL7 147 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 C12orf4Q9NQ89 552 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 ZMAT5Q9UDW3 170 aaKnown RBP7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 GAB2Q9UQC2 676 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 NUBP2Q9Y5Y2 271 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 V9GY05 133 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 COL7A1Q02388 2944 aa7.57□□□□□ -1.2
TMEM39A-207ENST00000482162 I3L521 148 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 RAB27BO00194 218 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 FCN1O00602 326 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 RRHO14718 337 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 ATP6V0E1O15342 81 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 SOX15O60248 233 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 TMEM127O75204 238 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 RBBP9O75884 186 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 DIRAS3O95661 229 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 SLC2A2P11168 524 aaPredicted RBP7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 ZBTB25P24278 435 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 CEACAM6P40199 344 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 SERPINB10P48595 397 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 LUMP51884 338 aaPredicted RBP7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 CLDN12P56749 244 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 VBP1P61758 197 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 NCS1P62166 190 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 CX3CL1P78423 397 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 HLA-DRB3P79483 266 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 PLA2G7Q13093 441 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 RPL39P5Q59GN2 51 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 ASPHD1Q5U4P2 390 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 CROCCP3Q8IVE0 287 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 IL1F10Q8WWZ1 152 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 ABHD14BQ96IU4 210 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 DUX3Q96PT4 197 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 NAA50Q9GZZ1 169 aaKnown RBP7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 DCSTAMPQ9H295 470 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 TPSG1Q9NRR2 321 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 OR1A1Q9P1Q5 309 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 RAB22AQ9UL26 194 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 FBXO7Q9Y3I1 522 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 LSM4Q9Y4Z0 139 aaKnown RBP7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 WSB1Q9Y6I7 421 aa7.56□□□□□ -1.2
TMEM39A-207ENST00000482162 SORL1Q92673 2214 aa7.55□□□□□ -1.2
TMEM39A-207ENST00000482162 TRAV41A0A0B4J266 112 aa7.55□□□□□ -1.2
TMEM39A-207ENST00000482162 TMEM272A0A1B0GTI8 110 aa7.55□□□□□ -1.2
TMEM39A-207ENST00000482162 IFITM5A6NNB3 132 aa7.55□□□□□ -1.2
TMEM39A-207ENST00000482162 TRDCB7Z8K6 153 aa7.55□□□□□ -1.2
TMEM39A-207ENST00000482162 RAMP3O60896 148 aa7.55□□□□□ -1.2
TMEM39A-207ENST00000482162 RAB3BP20337 219 aa7.55□□□□□ -1.2
TMEM39A-207ENST00000482162 VEGFCP49767 419 aa7.55□□□□□ -1.2
TMEM39A-207ENST00000482162 RAB9AP51151 201 aa7.55□□□□□ -1.2
TMEM39A-207ENST00000482162 DGCR2P98153 550 aa7.55□□□□□ -1.2
TMEM39A-207ENST00000482162 NDPQ00604 133 aa7.55□□□□□ -1.2
TMEM39A-207ENST00000482162 SRSF7Q16629 238 aaKnown RBP eCLIP7.55□□□□□ -1.2
TMEM39A-207ENST00000482162 DEFB136Q30KP8 78 aa7.55□□□□□ -1.2
TMEM39A-207ENST00000482162 FAM131AQ6UXB0 335 aa7.55□□□□□ -1.2
TMEM39A-207ENST00000482162 ZNF562Q6V9R5 426 aa7.55□□□□□ -1.2
TMEM39A-207ENST00000482162 Q6ZS49 121 aa7.55□□□□□ -1.2
TMEM39A-207ENST00000482162 NR2C2APQ86WQ0 139 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms