RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 MCRIP2Q9BUT9 160 aaKnown RBP4.13□□□□□ -1.75
SF3A3-202ENST00000460925 ST6GALNAC5Q9BVH7 336 aa4.13□□□□□ -1.75
SF3A3-202ENST00000460925 SNHG12Q9BXW3 62 aa4.13□□□□□ -1.75
SF3A3-202ENST00000460925 COMMD4Q9H0A8 199 aa4.13□□□□□ -1.75
SF3A3-202ENST00000460925 ARV1Q9H2C2 271 aa4.13□□□□□ -1.75
SF3A3-202ENST00000460925 DPAGT1Q9H3H5 408 aa4.13□□□□□ -1.75
SF3A3-202ENST00000460925 DUSP21Q9H596 190 aa4.13□□□□□ -1.75
SF3A3-202ENST00000460925 PLEKHA1Q9HB21 404 aa4.13□□□□□ -1.75
SF3A3-202ENST00000460925 CDH20Q9HBT6 801 aa4.13□□□□□ -1.75
SF3A3-202ENST00000460925 RAB18Q9NP72 206 aa4.13□□□□□ -1.75
SF3A3-202ENST00000460925 GPR173Q9NS66 373 aa4.13□□□□□ -1.75
SF3A3-202ENST00000460925 ELOVL5Q9NYP7 299 aa4.13□□□□□ -1.75
SF3A3-202ENST00000460925 SCP2D1Q9UJQ7 156 aa4.13□□□□□ -1.75
SF3A3-202ENST00000460925 AMDHD2Q9Y303 409 aa4.13□□□□□ -1.75
SF3A3-202ENST00000460925 EXOSC1Q9Y3B2 195 aaKnown RBP4.13□□□□□ -1.75
SF3A3-202ENST00000460925 TPRKBQ9Y3C4 175 aa4.13□□□□□ -1.75
SF3A3-202ENST00000460925 CSDC2Q9Y534 153 aaKnown RBP4.13□□□□□ -1.75
SF3A3-202ENST00000460925 TIMM10BQ9Y5J6 103 aa4.13□□□□□ -1.75
SF3A3-202ENST00000460925 FASNP49327 2511 aaKnown RBP4.13□□□□□ -1.75
SF3A3-202ENST00000460925 LOC105371242A0A075B767 164 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 IGLV5-52A0A0A0MRZ9 124 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.12□□□□□ -1.75
SF3A3-202ENST00000460925 IQCMA0A1B0GVH7 501 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 LOC107986453A0A1B0GWG9 222 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 SHISA9B4DS77 424 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 RAB29O14966 203 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 TGOLN2O43493 480 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 SOX15O60248 233 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 IGHV2-5P01817 119 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 TTRP02766 147 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 RLN1P04808 185 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 ARG1P05089 322 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 SNRPCP09234 159 aaKnown RBP4.12□□□□□ -1.75
SF3A3-202ENST00000460925 SPP1P10451 314 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 SSTR5P35346 364 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 TGFBR1P36897 503 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 RAG2P55895 527 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 BRWD1-AS2P59051 145 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 PCBD1P61457 104 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 RPS25P62851 125 aaKnown RBP4.12□□□□□ -1.75
SF3A3-202ENST00000460925 EMX1Q04741 257 aaPredicted RBP4.12□□□□□ -1.75
SF3A3-202ENST00000460925 GK2Q14410 553 aaPredicted RBP4.12□□□□□ -1.75
SF3A3-202ENST00000460925 SSX1Q16384 188 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 TBC1D28Q2M2D7 210 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 KRTAP27-1Q3LI81 207 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 SPIN3Q5JUX0 258 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 GLYATL3Q5SZD4 288 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 NCMAPQ5T1S8 102 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 FAM27D1Q5T7N8 215 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 LIPKQ5VXJ0 399 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 WDR25Q64LD2 544 aaPredicted RBP4.12□□□□□ -1.75
SF3A3-202ENST00000460925 TMEM42Q69YG0 159 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 RNASEKQ6P5S7 137 aaKnown RBP4.12□□□□□ -1.75
SF3A3-202ENST00000460925 HAGHLQ6PII5 290 aaPredicted RBP4.12□□□□□ -1.75
SF3A3-202ENST00000460925 ARL9Q6T311 187 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 LRP11Q86VZ4 500 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 COMMD2Q86X83 199 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.12□□□□□ -1.75
SF3A3-202ENST00000460925 TCTE3Q8IZS6 198 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 OR5AS1Q8N127 324 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 ZNF114Q8NC26 417 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 OR2Z1Q8NG97 314 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 OR4C5Q8NGB2 326 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 PCNPQ8WW12 178 aaKnown RBP4.12□□□□□ -1.75
SF3A3-202ENST00000460925 COQ2Q96H96 371 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 SFRP2Q96HF1 295 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 C4orf45Q96LM5 186 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 VPS25Q9BRG1 176 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 MAP1LC3CQ9BXW4 147 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 PBOV1Q9GZY1 135 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 HMG20AQ9NP66 347 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 ACOT13Q9NPJ3 140 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 SLC2A9Q9NRM0 540 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 FAM206AQ9NX38 181 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 PITPNC1Q9UKF7 332 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 TMEM14AQ9Y6G1 99 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 R4GMQ9 66 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 CSMD1Q96PZ7 3565 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 LRRK2Q5S007 2527 aa4.12□□□□□ -1.75
SF3A3-202ENST00000460925 USF3Q68DE3 2245 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 HELZ2Q9BYK8 2649 aaKnown RBP4.11□□□□□ -1.75
SF3A3-202ENST00000460925 A0A087WXM4 84 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 IGHV3-64DA0A0J9YX35 117 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 TMEM269A0A1B0GVZ9 245 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 TMEM129A0AVI4 362 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 C15orf62A8K5M9 175 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 A8MWP6 167 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 TSTD3H0UI37 97 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 H3BMQ9 156 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 OR8U9P0C7N5 309 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 PPIAL4GP0DN37 164 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 ZNF35P13682 527 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 ZNF44P15621 663 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 SPNP16150 400 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 CELP19835 753 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 RAB2AP61019 212 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 PPP1CBP62140 327 aa4.11□□□□□ -1.75
SF3A3-202ENST00000460925 RPL32P62910 135 aaKnown RBP4.11□□□□□ -1.75
SF3A3-202ENST00000460925 GRB2P62993 217 aaKnown RBP4.11□□□□□ -1.75
SF3A3-202ENST00000460925 ZNF92Q03936 586 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms