RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ATPIF1Q9UII2 106 aa2.02□□□□□ -2.09
HPS3-203ENST00000460822 RAB22AQ9UL26 194 aa2.02□□□□□ -2.09
HPS3-203ENST00000460822 SAMHD1Q9Y3Z3 626 aaKnown RBP2.02□□□□□ -2.09
HPS3-203ENST00000460822 MTCH2Q9Y6C9 303 aa2.02□□□□□ -2.09
HPS3-203ENST00000460822 U3KQ87 197 aa2.02□□□□□ -2.09
HPS3-203ENST00000460822 COL4A5P29400 1685 aa2.02□□□□□ -2.09
HPS3-203ENST00000460822 ANAPC1Q9H1A4 1944 aa2.02□□□□□ -2.09
HPS3-203ENST00000460822 MYO10Q9HD67 2058 aa2.02□□□□□ -2.09
HPS3-203ENST00000460822 IGKV1-27A0A075B6S5 117 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 TRAV19A0A0A6YYK7 116 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 A0A1W2PQL4 384 aaPredicted RBP2.01□□□□□ -2.09
HPS3-203ENST00000460822 A0A1W2PRG6 482 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 M0R129 80 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 DNASE2O00115 360 aaPredicted RBP2.01□□□□□ -2.09
HPS3-203ENST00000460822 PSPHP1O15172 72 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 SYNGR1O43759 233 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 NDUFS5O43920 106 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 ZNF861PO60384 105 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 OR1I1O60431 355 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 IGKV3-15P01624 115 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 IL6P05231 212 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 TSPAN19P0C672 248 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 OGNP20774 298 aaKnown RBP2.01□□□□□ -2.09
HPS3-203ENST00000460822 TSPOP30536 169 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 SSTR5P35346 364 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 DRD3P35462 400 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 CBX5P45973 191 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 IDH2P48735 452 aaKnown RBP2.01□□□□□ -2.09
HPS3-203ENST00000460822 PPOXP50336 477 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 LHX2P50458 406 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 RAB25P57735 213 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 RPL23P62829 140 aaKnown RBP2.01□□□□□ -2.09
HPS3-203ENST00000460822 NDPQ00604 133 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 BAXQ07812 192 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 ERCC8Q13216 396 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 IHHQ14623 411 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 TBC1D28Q2M2D7 210 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 TMEM255AQ5JRV8 349 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 CLLU1Q5K131 121 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 CLVS2Q5SYC1 327 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 FKBP1CQ5VVH2 108 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 GALNT10Q86SR1 603 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 PRSS58Q8IYP2 241 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 ZCCHC24Q8N2G6 241 aaKnown RBP2.01□□□□□ -2.09
HPS3-203ENST00000460822 KRTCAP2Q8N6L1 136 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 OR5T1Q8NG75 326 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 OR10G4Q8NGN3 311 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 SYNPRQ8TBG9 265 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 SLC25A46Q96AG3 418 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 TM4SF18Q96CE8 201 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 IMP4Q96G21 291 aaKnown RBP2.01□□□□□ -2.09
HPS3-203ENST00000460822 SMARCD1Q96GM5 515 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 KCNS1Q96KK3 526 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 PPP3R2Q96LZ3 170 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 METTL26Q96S19 204 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 MARVELD1Q9BSK0 173 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 CHAC1Q9BUX1 264 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 CDCA4Q9BXL8 241 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 SAMD10Q9BYL1 202 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 ULBP1Q9BZM6 244 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 DPY30Q9C005 99 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 RBM22Q9NW64 420 aaKnown RBP eCLIP2.01□□□□□ -2.09
HPS3-203ENST00000460822 PRG3Q9Y2Y8 225 aaPredicted RBP2.01□□□□□ -2.09
HPS3-203ENST00000460822 LSM2Q9Y333 95 aaKnown RBP2.01□□□□□ -2.09
HPS3-203ENST00000460822 PLXND1Q9Y4D7 1925 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 NUP210Q8TEM1 1887 aaPredicted RBP2.01□□□□□ -2.09
HPS3-203ENST00000460822 UTRNP46939 3433 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 DOCK6Q96HP0 2047 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 IGHV3-64DA0A0J9YX35 117 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 RBFOX3A6NFN3 312 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 OR5K4A6NMS3 321 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 C11orf94C9JXX5 98 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 F5H768 121 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 H0Y980 276 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 PIRO00625 290 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 LYRM1O43325 122 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 CHP2O43745 196 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 ORC5O43913 435 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 CDRT1O95170 752 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 MPC2O95563 127 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 C1QCP02747 245 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 IFNA16P05015 189 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 PIPP12273 146 aaPredicted RBP2.01□□□□□ -2.09
HPS3-203ENST00000460822 UGT2B7P16662 529 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 ZNF19P17023 458 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 ZNF7P17097 686 aaPredicted RBP2.01□□□□□ -2.09
HPS3-203ENST00000460822 TCN2P20062 427 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 F8A1P23610 371 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 PSMA1P25786 263 aaKnown RBP2.01□□□□□ -2.09
HPS3-203ENST00000460822 GRPRP30550 384 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 APLNRP35414 380 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 PSMB2P49721 201 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 CCR6P51684 374 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 ACTBP60709 375 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 MAXP61244 160 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 ACTG1P63261 375 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 BTN1A1Q13410 526 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 GRK1Q15835 563 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 KLHL12Q53G59 568 aa2.01□□□□□ -2.09
HPS3-203ENST00000460822 PYDC2Q56P42 97 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms