RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 C2orf68Q2NKX9 166 aa12.55□□□□□ -0.4
VAT1-202ENST00000420567 NSUN5P1Q3KNT7 163 aa12.55□□□□□ -0.4
VAT1-202ENST00000420567 H1FOOQ8IZA3 346 aaPredicted RBP12.55□□□□□ -0.4
VAT1-202ENST00000420567 FAM71E2Q8N5Q1 922 aa12.55□□□□□ -0.4
VAT1-202ENST00000420567 GVQW1Q8N7I0 195 aa12.55□□□□□ -0.4
VAT1-202ENST00000420567 OR8H1Q8NGG4 311 aa12.55□□□□□ -0.4
VAT1-202ENST00000420567 KCTD12Q96CX2 325 aaKnown RBP12.55□□□□□ -0.4
VAT1-202ENST00000420567 S100A16Q96FQ6 103 aaKnown RBP12.55□□□□□ -0.4
VAT1-202ENST00000420567 CITED2Q99967 270 aaPredicted RBP12.55□□□□□ -0.4
VAT1-202ENST00000420567 COMMD3Q9UBI1 195 aa12.55□□□□□ -0.4
VAT1-202ENST00000420567 RBM7Q9Y580 266 aaKnown RBP12.55□□□□□ -0.4
VAT1-202ENST00000420567 OR5H14A6NHG9 310 aa12.54□□□□□ -0.4
VAT1-202ENST00000420567 H7C2Y5 167 aa12.54□□□□□ -0.4
VAT1-202ENST00000420567 IGHG2P01859 326 aa12.54□□□□□ -0.4
VAT1-202ENST00000420567 EIF4EP06730 217 aaKnown RBP12.54□□□□□ -0.4
VAT1-202ENST00000420567 TAS2R20P59543 309 aa12.54□□□□□ -0.4
VAT1-202ENST00000420567 ZNF383Q8NA42 475 aa12.54□□□□□ -0.4
VAT1-202ENST00000420567 FAM110DQ8TAY7 271 aaPredicted RBP12.54□□□□□ -0.4
VAT1-202ENST00000420567 C5orf30Q96GV9 206 aa12.54□□□□□ -0.4
VAT1-202ENST00000420567 HSPB9Q9BQS6 159 aa12.54□□□□□ -0.4
VAT1-202ENST00000420567 ANXA10Q9UJ72 324 aa12.54□□□□□ -0.4
VAT1-202ENST00000420567 PSMB11A5LHX3 300 aa12.53□□□□□ -0.4
VAT1-202ENST00000420567 MEIS3P1A6NDR6 274 aa12.53□□□□□ -0.4
VAT1-202ENST00000420567 NBR2O15453 112 aa12.53□□□□□ -0.4
VAT1-202ENST00000420567 XRCC3O43542 346 aa12.53□□□□□ -0.4
VAT1-202ENST00000420567 NFYAP23511 347 aaPredicted RBP12.53□□□□□ -0.4
VAT1-202ENST00000420567 RORCP51449 518 aa12.53□□□□□ -0.4
VAT1-202ENST00000420567 TCTEX1D4Q5JR98 221 aa12.53□□□□□ -0.4
VAT1-202ENST00000420567 TMEM69Q5SWH9 247 aa12.53□□□□□ -0.4
VAT1-202ENST00000420567 CNIH2Q6PI25 160 aa12.53□□□□□ -0.4
VAT1-202ENST00000420567 ZNF329Q86UD4 541 aa12.53□□□□□ -0.4
VAT1-202ENST00000420567 CLVS1Q8IUQ0 354 aaPredicted RBP12.53□□□□□ -0.4
VAT1-202ENST00000420567 FOXRED2Q8IWF2 684 aa12.53□□□□□ -0.4
VAT1-202ENST00000420567 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.53□□□□□ -0.4
VAT1-202ENST00000420567 BEST4Q8NFU0 473 aa12.53□□□□□ -0.4
VAT1-202ENST00000420567 OR4X2Q8NGF9 303 aa12.53□□□□□ -0.4
VAT1-202ENST00000420567 OR5AN1Q8NGI8 311 aa12.53□□□□□ -0.4
VAT1-202ENST00000420567 SDHAF2Q9NX18 166 aa12.53□□□□□ -0.4
VAT1-202ENST00000420567 WASHC3Q9Y3C0 194 aa12.53□□□□□ -0.4
VAT1-202ENST00000420567 A0A1W2PRX2 142 aa12.52□□□□□ -0.41
VAT1-202ENST00000420567 CTXN2P0C2S0 81 aa12.52□□□□□ -0.41
VAT1-202ENST00000420567 SOX6P35712 828 aa12.52□□□□□ -0.41
VAT1-202ENST00000420567 ARPC4P59998 168 aa12.52□□□□□ -0.41
VAT1-202ENST00000420567 KHDC1LQ5JSQ8 128 aa12.52□□□□□ -0.41
VAT1-202ENST00000420567 HOGA1Q86XE5 327 aa12.52□□□□□ -0.41
VAT1-202ENST00000420567 MMP27Q9H306 513 aa12.52□□□□□ -0.41
VAT1-202ENST00000420567 KIAA1456Q9P272 454 aa12.52□□□□□ -0.41
VAT1-202ENST00000420567 ZNF107Q9UII5 783 aaPredicted RBP12.52□□□□□ -0.41
VAT1-202ENST00000420567 ADARB2-AS1A8MUL3 147 aa12.51□□□□□ -0.41
VAT1-202ENST00000420567 HPGDSO60760 199 aa12.51□□□□□ -0.41
VAT1-202ENST00000420567 APOA2P02652 100 aa12.51□□□□□ -0.41
VAT1-202ENST00000420567 IGKV1-16P04430 117 aa12.51□□□□□ -0.41
VAT1-202ENST00000420567 MC5RP33032 325 aa12.51□□□□□ -0.41
VAT1-202ENST00000420567 CD83Q01151 205 aa12.51□□□□□ -0.41
VAT1-202ENST00000420567 SPCS2Q15005 226 aa12.51□□□□□ -0.41
VAT1-202ENST00000420567 NDUFA11Q86Y39 141 aa12.51□□□□□ -0.41
VAT1-202ENST00000420567 STPG2Q8N412 459 aa12.51□□□□□ -0.41
VAT1-202ENST00000420567 NPBQ8NG41 125 aa12.51□□□□□ -0.41
VAT1-202ENST00000420567 CHPT1Q8WUD6 406 aa12.51□□□□□ -0.41
VAT1-202ENST00000420567 ACOT12Q8WYK0 555 aa12.51□□□□□ -0.41
VAT1-202ENST00000420567 TCRBV4S1A1TA0A5B7 111 aa12.5□□□□□ -0.41
VAT1-202ENST00000420567 AP4M1O00189 453 aa12.5□□□□□ -0.41
VAT1-202ENST00000420567 KCNAB3O43448 404 aa12.5□□□□□ -0.41
VAT1-202ENST00000420567 NDUFA3O95167 84 aa12.5□□□□□ -0.41
VAT1-202ENST00000420567 ELK1P19419 428 aa12.5□□□□□ -0.41
VAT1-202ENST00000420567 LUMP51884 338 aaPredicted RBP12.5□□□□□ -0.41
VAT1-202ENST00000420567 C5orf64Q2M2E5 130 aa12.5□□□□□ -0.41
VAT1-202ENST00000420567 AP3S1Q92572 193 aa12.5□□□□□ -0.41
VAT1-202ENST00000420567 SNAPC3Q92966 411 aa12.5□□□□□ -0.41
VAT1-202ENST00000420567 FBXL15Q9H469 300 aa12.5□□□□□ -0.41
VAT1-202ENST00000420567 IFT46Q9NQC8 304 aa12.5□□□□□ -0.41
VAT1-202ENST00000420567 SLC35D1Q9NTN3 355 aa12.5□□□□□ -0.41
VAT1-202ENST00000420567 GAB2Q9UQC2 676 aa12.5□□□□□ -0.41
VAT1-202ENST00000420567 MRPS7Q9Y2R9 242 aaKnown RBP12.5□□□□□ -0.41
VAT1-202ENST00000420567 OR2W1Q9Y3N9 320 aa12.5□□□□□ -0.41
VAT1-202ENST00000420567 IGKV1D-13A0A0B4J2D9 117 aa12.49□□□□□ -0.41
VAT1-202ENST00000420567 RBBP9O75884 186 aa12.49□□□□□ -0.41
VAT1-202ENST00000420567 APOA1P02647 267 aa12.49□□□□□ -0.41
VAT1-202ENST00000420567 IGKV1-13P0DP09 117 aa12.49□□□□□ -0.41
VAT1-202ENST00000420567 ZNF182P17025 639 aaPredicted RBP12.49□□□□□ -0.41
VAT1-202ENST00000420567 CBX5P45973 191 aa12.49□□□□□ -0.41
VAT1-202ENST00000420567 RPL5P46777 297 aaKnown RBP12.49□□□□□ -0.41
VAT1-202ENST00000420567 PLGLAQ15195 96 aa12.49□□□□□ -0.41
VAT1-202ENST00000420567 PDPNQ86YL7 162 aa12.49□□□□□ -0.41
VAT1-202ENST00000420567 SNX29P2Q8IUI4 249 aa12.49□□□□□ -0.41
VAT1-202ENST00000420567 CMTM3Q96MX0 182 aa12.49□□□□□ -0.41
VAT1-202ENST00000420567 PARP11Q9NR21 331 aa12.49□□□□□ -0.41
VAT1-202ENST00000420567 IGHV7-81A0A0B4J1V7 117 aa12.48□□□□□ -0.41
VAT1-202ENST00000420567 FAM25AB3EWG3 89 aa12.48□□□□□ -0.41
VAT1-202ENST00000420567 FAM25CB3EWG5 89 aa12.48□□□□□ -0.41
VAT1-202ENST00000420567 FAM25GB3EWG6 89 aa12.48□□□□□ -0.41
VAT1-202ENST00000420567 RRHO14718 337 aa12.48□□□□□ -0.41
VAT1-202ENST00000420567 HLA-DRB1P01911 266 aa12.48□□□□□ -0.41
VAT1-202ENST00000420567 HLA-DQB1P01920 261 aa12.48□□□□□ -0.41
VAT1-202ENST00000420567 OPN1MWP04001 364 aa12.48□□□□□ -0.41
VAT1-202ENST00000420567 OPN1MW2P0DN77 364 aa12.48□□□□□ -0.41
VAT1-202ENST00000420567 OPN1MW3P0DN78 364 aa12.48□□□□□ -0.41
VAT1-202ENST00000420567 DUTP33316 252 aaKnown RBP12.48□□□□□ -0.41
VAT1-202ENST00000420567 THBS3P49746 956 aa12.48□□□□□ -0.41
VAT1-202ENST00000420567 RPS16P62249 146 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms