RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 FOXRED2Q8IWF2 684 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 FAM71E2Q8N5Q1 922 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 DRAXINQ8NBI3 349 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 OR10R2Q8NGX6 335 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 CHPT1Q8WUD6 406 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 RAB3CQ96E17 227 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 RIMS4Q9H426 269 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 TXNL4BQ9NX01 149 aaKnown RBP4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 ZNF230Q9UIE0 474 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 ZNF107Q9UII5 783 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 RAB22AQ9UL26 194 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 STUB1Q9UNE7 303 aa4.53□□□□□ -1.68
HMGB1P20-201ENST00000402555 IGKV1D-8A0A087WSZ0 117 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 LOC100506127A0A0U1RQW1 187 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 NOTOA8MTQ0 251 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 TRDCB7Z8K6 153 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 G3V318 75 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 H7C2Y5 167 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 AP4M1O00189 453 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 MFNGO00587 321 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 RAB29O14966 203 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 BET1O15155 118 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 NBR2O15453 112 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 FABP7O15540 132 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 PROP1O75360 226 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 FCGR3AP08637 254 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 GSTT2P0CG29 244 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 GSTT2BP0CG30 244 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 HIST1H1DP16402 221 aaKnown RBP4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 ZBTB25P24278 435 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 GADD45AP24522 165 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 FGF9P31371 208 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 SOX6P35712 828 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 SLC35B1P78383 322 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 MRPS15P82914 257 aaKnown RBP4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 NDPQ00604 133 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 ARFRP1Q13795 201 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 PNLIPRP3Q17RR3 467 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 DEFB136Q30KP8 78 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 IGSF11Q5DX21 431 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 KPRPQ5T749 579 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 MRPL41Q8IXM3 137 aaKnown RBP4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 LINC00482Q8N8I6 264 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 KLHL30-AS1Q8NEE0 82 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 FCGR1BQ92637 280 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 PHF21AQ96BD5 680 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 C5orf30Q96GV9 206 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 CHCHD6Q9BRQ6 235 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 AGMATQ9BSE5 352 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 YTHDF1Q9BYJ9 559 aaKnown RBP4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 ATG5Q9H1Y0 275 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 FBXL15Q9H469 300 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 PARP11Q9NR21 331 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 RDH8Q9NYR8 311 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 PIPOXQ9P0Z9 390 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 DAPK2Q9UIK4 370 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 SSR3Q9UNL2 185 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 WSB1Q9Y6I7 421 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 TNCP24821 2201 aa4.52□□□□□ -1.69
HMGB1P20-201ENST00000402555 IGHV7-81A0A0B4J1V7 117 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 METTL21EPA6NDL7 271 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 H0YJW9 148 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 J3QRK9 145 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 M0R1X1 148 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 FCN1O00602 326 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 ITGB1BP1O14713 200 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 RRHO14718 337 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 ATP6V0E1O15342 81 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 RRP9O43818 475 aaKnown RBP4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 HLA-DRB1P01911 266 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR8U9P0C7N5 309 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 CD36P16671 472 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 VDAC1P21796 283 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 GALP22466 123 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 HOXD3P31249 432 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 SDC2P34741 201 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 TGFBR1P36897 503 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 THBS3P49746 956 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 CFHR3Q02985 330 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 ECSCRQ19T08 205 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 C5orf64Q2M2E5 130 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 CDNFQ49AH0 187 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 KCTD21Q4G0X4 260 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 CXorf66Q5JRM2 361 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 FOXB2Q5VYV0 432 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 LIN54Q6MZP7 749 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 SFXN4Q6P4A7 337 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 TEX38Q6PEX7 206 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 ZNF695Q8IW36 515 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 COMMD1Q8N668 190 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 ZNF383Q8NA42 475 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 WFDC9Q8NEX5 89 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 NPBQ8NG41 125 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR8H1Q8NGG4 311 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR4A4PQ8NGN8 299 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR5H6Q8NGV6 325 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR8U1Q8NH10 309 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 LGALS14Q8TCE9 139 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 CASTOR1Q8WTX7 329 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms