RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 CEACAM6P40199 344 aa10.52□□□□□ -0.73
SCAF11-203ENST00000395453 VEGFCP49767 419 aa10.52□□□□□ -0.73
SCAF11-203ENST00000395453 RAB11BQ15907 218 aa10.52□□□□□ -0.73
SCAF11-203ENST00000395453 RPL39P5Q59GN2 51 aa10.52□□□□□ -0.73
SCAF11-203ENST00000395453 FAM131AQ6UXB0 335 aa10.52□□□□□ -0.73
SCAF11-203ENST00000395453 OR5AN1Q8NGI8 311 aa10.52□□□□□ -0.73
SCAF11-203ENST00000395453 SETD6Q8TBK2 473 aa10.52□□□□□ -0.73
SCAF11-203ENST00000395453 FAM3DQ96BQ1 224 aa10.52□□□□□ -0.73
SCAF11-203ENST00000395453 ARHGAP5-AS1Q96IT6 56 aa10.52□□□□□ -0.73
SCAF11-203ENST00000395453 ABHD14BQ96IU4 210 aa10.52□□□□□ -0.73
SCAF11-203ENST00000395453 PECRQ9BY49 303 aa10.52□□□□□ -0.73
SCAF11-203ENST00000395453 C11orf54Q9H0W9 315 aaPredicted RBP10.52□□□□□ -0.73
SCAF11-203ENST00000395453 ACOT13Q9NPJ3 140 aa10.52□□□□□ -0.73
SCAF11-203ENST00000395453 SCOCQ9UIL1 159 aa10.52□□□□□ -0.73
SCAF11-203ENST00000395453 DNAH7Q8WXX0 4024 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 TRAV41A0A0B4J266 112 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 H0YJW9 148 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 RRHO14718 337 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 SCTP09683 121 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 CALRP27797 417 aaKnown RBP10.51□□□□□ -0.73
SCAF11-203ENST00000395453 RANBP1P43487 201 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 MAP2K4P45985 399 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 RAB9AP51151 201 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 PSMD7P51665 324 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 CLDN12P56749 244 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 RAB25P57735 213 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 HLA-DRB3P79483 266 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 NDPQ00604 133 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 PLAC9Q5JTB6 97 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 C9orf66Q5T8R8 295 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 ZNF660Q6AZW8 331 aaPredicted RBP10.51□□□□□ -0.73
SCAF11-203ENST00000395453 TMEM65Q6PI78 240 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 OR11H1Q8NG94 326 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 EDARADDQ8WWZ3 215 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 RNF5Q99942 180 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 CCDC90BQ9GZT6 254 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 TOLLIPQ9H0E2 274 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 GNB4Q9HAV0 340 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 C12orf4Q9NQ89 552 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 PARP11Q9NR21 331 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 OR1A1Q9P1Q5 309 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 KIAA1456Q9P272 454 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 VSIG4Q9Y279 399 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 FBXO7Q9Y3I1 522 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 LSM4Q9Y4Z0 139 aaKnown RBP10.51□□□□□ -0.73
SCAF11-203ENST00000395453 NUBP2Q9Y5Y2 271 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 V9GY05 133 aa10.51□□□□□ -0.73
SCAF11-203ENST00000395453 IGKV1-6A0A0C4DH72 117 aa10.5□□□□□ -0.73
SCAF11-203ENST00000395453 FCN1O00602 326 aa10.5□□□□□ -0.73
SCAF11-203ENST00000395453 RBBP9O75884 186 aa10.5□□□□□ -0.73
SCAF11-203ENST00000395453 EGR2P11161 476 aaPredicted RBP10.5□□□□□ -0.73
SCAF11-203ENST00000395453 LUMP51884 338 aaPredicted RBP10.5□□□□□ -0.73
SCAF11-203ENST00000395453 CX3CL1P78423 397 aa10.5□□□□□ -0.73
SCAF11-203ENST00000395453 TBCEQ15813 527 aaPredicted RBP10.5□□□□□ -0.73
SCAF11-203ENST00000395453 ASPHD1Q5U4P2 390 aa10.5□□□□□ -0.73
SCAF11-203ENST00000395453 GLDNQ6ZMI3 551 aaPredicted RBP10.5□□□□□ -0.73
SCAF11-203ENST00000395453 OR56B1Q8NGI3 324 aa10.5□□□□□ -0.73
SCAF11-203ENST00000395453 ASCL2Q99929 193 aa10.5□□□□□ -0.73
SCAF11-203ENST00000395453 FBXL15Q9H469 300 aa10.5□□□□□ -0.73
SCAF11-203ENST00000395453 RAB22AQ9UL26 194 aa10.5□□□□□ -0.73
SCAF11-203ENST00000395453 KCNK7Q9Y2U2 307 aa10.5□□□□□ -0.73
SCAF11-203ENST00000395453 WASHC3Q9Y3C0 194 aa10.5□□□□□ -0.73
SCAF11-203ENST00000395453 TRAV1-2A0A0B4J238 106 aa10.49□□□□□ -0.73
SCAF11-203ENST00000395453 TMEM272A0A1B0GTI8 110 aa10.49□□□□□ -0.73
SCAF11-203ENST00000395453 SEC14L6B5MCN3 397 aa10.49□□□□□ -0.73
SCAF11-203ENST00000395453 TRDCB7Z8K6 153 aa10.49□□□□□ -0.73
SCAF11-203ENST00000395453 HSPA12AO43301 675 aa10.49□□□□□ -0.73
SCAF11-203ENST00000395453 DENRO43583 198 aaKnown RBP10.49□□□□□ -0.73
SCAF11-203ENST00000395453 SOX15O60248 233 aa10.49□□□□□ -0.73
SCAF11-203ENST00000395453 LYL1P12980 280 aa10.49□□□□□ -0.73
SCAF11-203ENST00000395453 HSPA13P48723 471 aa10.49□□□□□ -0.73
SCAF11-203ENST00000395453 PLA2G7Q13093 441 aa10.49□□□□□ -0.73
SCAF11-203ENST00000395453 SSX1Q16384 188 aa10.49□□□□□ -0.73
SCAF11-203ENST00000395453 CD200R1LQ6Q8B3 271 aa10.49□□□□□ -0.73
SCAF11-203ENST00000395453 OR1N2Q8NGR9 330 aa10.49□□□□□ -0.73
SCAF11-203ENST00000395453 CMSS1Q9BQ75 279 aaKnown RBP10.49□□□□□ -0.73
SCAF11-203ENST00000395453 KRTAP17-1Q9BYP8 105 aa10.49□□□□□ -0.73
SCAF11-203ENST00000395453 VCX3BQ9H321 246 aa10.49□□□□□ -0.73
SCAF11-203ENST00000395453 GAR1Q9NY12 217 aaKnown RBP10.49□□□□□ -0.73
SCAF11-203ENST00000395453 RNF150Q9ULK6 438 aa10.49□□□□□ -0.73
SCAF11-203ENST00000395453 DNAH1Q9P2D7 4330 aa10.49□□□□□ -0.73
SCAF11-203ENST00000395453 SHISA3A0PJX4 238 aa10.48□□□□□ -0.73
SCAF11-203ENST00000395453 GSTP1P09211 210 aaKnown RBP10.48□□□□□ -0.73
SCAF11-203ENST00000395453 OR8U8P0C7N1 319 aa10.48□□□□□ -0.73
SCAF11-203ENST00000395453 LINC00205P59089 165 aa10.48□□□□□ -0.73
SCAF11-203ENST00000395453 GNB1P62873 340 aa10.48□□□□□ -0.73
SCAF11-203ENST00000395453 ZNF616Q08AN1 781 aa10.48□□□□□ -0.73
SCAF11-203ENST00000395453 AKIRIN2Q53H80 203 aa10.48□□□□□ -0.73
SCAF11-203ENST00000395453 ZNF562Q6V9R5 426 aa10.48□□□□□ -0.73
SCAF11-203ENST00000395453 ZNF367Q7RTV3 350 aa10.48□□□□□ -0.73
SCAF11-203ENST00000395453 TCTEX1D1Q8N7M0 179 aa10.48□□□□□ -0.73
SCAF11-203ENST00000395453 OR4A4PQ8NGN8 299 aa10.48□□□□□ -0.73
SCAF11-203ENST00000395453 PALMDQ9NP74 551 aa10.48□□□□□ -0.73
SCAF11-203ENST00000395453 LYSTQ99698 3801 aa10.48□□□□□ -0.73
SCAF11-203ENST00000395453 H7C2Y5 167 aa10.47□□□□□ -0.73
SCAF11-203ENST00000395453 IGKV1-16P04430 117 aa10.47□□□□□ -0.73
SCAF11-203ENST00000395453 INSL3P51460 131 aa10.47□□□□□ -0.73
SCAF11-203ENST00000395453 TMEM267Q0VDI3 215 aaPredicted RBP10.47□□□□□ -0.73
SCAF11-203ENST00000395453 PSG5Q15238 335 aa10.47□□□□□ -0.73
SCAF11-203ENST00000395453 HES5Q5TA89 166 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms