RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 MAFIPQ8WZ33 124 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 PTX4Q96A99 478 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 TOLLIPQ9H0E2 274 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 CHMP1AQ9HD42 196 aaPredicted RBP6.88□□□□□ -1.31
ATG4A-205ENST00000394892 RAB9BQ9NP90 201 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 TPSG1Q9NRR2 321 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 NDUFB11Q9NX14 153 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 LRRC42Q9Y546 428 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 COL7A1Q02388 2944 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 HUWE1Q7Z6Z7 4374 aaKnown RBP6.87□□□□□ -1.31
ATG4A-205ENST00000394892 TRDV1A0A1B0GX56 115 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 IFITM5A6NNB3 132 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 MFNGO00587 321 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 RRHO14718 337 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 DENRO43583 198 aaKnown RBP6.87□□□□□ -1.31
ATG4A-205ENST00000394892 ARL6IP5O75915 188 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 RGS11O94810 467 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 ATP6V1G2O95670 118 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 PSMA1P25786 263 aaKnown RBP6.87□□□□□ -1.31
ATG4A-205ENST00000394892 CRIP2P52943 208 aaPredicted RBP6.87□□□□□ -1.31
ATG4A-205ENST00000394892 TRAM1Q15629 374 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 IGSF11Q5DX21 431 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 CXorf66Q5JRM2 361 aaPredicted RBP6.87□□□□□ -1.31
ATG4A-205ENST00000394892 UBE2UQ5VVX9 321 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 LIN54Q6MZP7 749 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 FAM71F2Q6NXP2 309 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 MOB1BQ7L9L4 216 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 SPARTQ8N0X7 666 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 OR5B12Q96R08 314 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 URM1Q9BTM9 101 aaKnown RBP6.87□□□□□ -1.31
ATG4A-205ENST00000394892 ALX4Q9H161 411 aaPredicted RBP6.87□□□□□ -1.31
ATG4A-205ENST00000394892 RIMS4Q9H426 269 aaPredicted RBP6.87□□□□□ -1.31
ATG4A-205ENST00000394892 C12orf4Q9NQ89 552 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 PARP11Q9NR21 331 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 ABRACLQ9P1F3 81 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 STEAP1Q9UHE8 339 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 ZNF230Q9UIE0 474 aaPredicted RBP6.87□□□□□ -1.31
ATG4A-205ENST00000394892 NUBP2Q9Y5Y2 271 aa6.87□□□□□ -1.31
ATG4A-205ENST00000394892 RYR3Q15413 4870 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 TRAV41A0A0B4J266 112 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 SRRM4A7MD48 611 aaKnown RBP6.86□□□□□ -1.31
ATG4A-205ENST00000394892 TRDCB7Z8K6 153 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 RAB29O14966 203 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 ARPC1BO15143 372 aaKnown RBP6.86□□□□□ -1.31
ATG4A-205ENST00000394892 IGLV2-23P01705 113 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 CRYGBP07316 175 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 FCGR3AP08637 254 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 GSTT2P0CG29 244 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 GSTT2BP0CG30 244 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 GNB3P16520 340 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 SLC6A1P30531 599 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 RAB9AP51151 201 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 RUNX1Q01196 453 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 PSG5Q15238 335 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 C22orf42Q6IC83 251 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 OR56B1Q8NGI3 324 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 C4orf3Q8WVX3 66 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 CMSS1Q9BQ75 279 aaKnown RBP6.86□□□□□ -1.31
ATG4A-205ENST00000394892 FAM103A1Q9BTL3 118 aaKnown RBP6.86□□□□□ -1.31
ATG4A-205ENST00000394892 CABLES2Q9BTV7 478 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 RNF167Q9H6Y7 350 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 RDH8Q9NYR8 311 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 PIPOXQ9P0Z9 390 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 RAB22AQ9UL26 194 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 RAB26Q9ULW5 256 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 U3KQK5 164 aa6.86□□□□□ -1.31
ATG4A-205ENST00000394892 TRBV6-7A0A0A0MS04 114 aa6.85□□□□□ -1.31
ATG4A-205ENST00000394892 OR5H14A6NHG9 310 aa6.85□□□□□ -1.31
ATG4A-205ENST00000394892 C3orf84H3BNL1 204 aa6.85□□□□□ -1.31
ATG4A-205ENST00000394892 FABP7O15540 132 aa6.85□□□□□ -1.31
ATG4A-205ENST00000394892 RRP9O43818 475 aaKnown RBP6.85□□□□□ -1.31
ATG4A-205ENST00000394892 RBMXL2O75526 392 aaKnown RBP6.85□□□□□ -1.31
ATG4A-205ENST00000394892 CLEC2LP0C7M8 214 aa6.85□□□□□ -1.31
ATG4A-205ENST00000394892 HIST1H1DP16402 221 aaKnown RBP6.85□□□□□ -1.31
ATG4A-205ENST00000394892 VDAC1P21796 283 aa6.85□□□□□ -1.31
ATG4A-205ENST00000394892 ZBTB25P24278 435 aa6.85□□□□□ -1.31
ATG4A-205ENST00000394892 HSPA13P48723 471 aa6.85□□□□□ -1.31
ATG4A-205ENST00000394892 DGCR2P98153 550 aa6.85□□□□□ -1.31
ATG4A-205ENST00000394892 PJVKQ0ZLH3 352 aa6.85□□□□□ -1.31
ATG4A-205ENST00000394892 OR11H1Q8NG94 326 aa6.85□□□□□ -1.31
ATG4A-205ENST00000394892 OR10R2Q8NGX6 335 aa6.85□□□□□ -1.31
ATG4A-205ENST00000394892 OR8U1Q8NH10 309 aa6.85□□□□□ -1.31
ATG4A-205ENST00000394892 RAB3CQ96E17 227 aa6.85□□□□□ -1.31
ATG4A-205ENST00000394892 UBE2E2Q96LR5 201 aa6.85□□□□□ -1.31
ATG4A-205ENST00000394892 CLCC1Q96S66 551 aa6.85□□□□□ -1.31
ATG4A-205ENST00000394892 LSM4Q9Y4Z0 139 aaKnown RBP6.85□□□□□ -1.31
ATG4A-205ENST00000394892 A0A075B6Q4 140 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 BET1O15155 118 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 SSX5O60225 188 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 RAMP3O60896 148 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 OR8U9P0C7N5 309 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 RAB3BP20337 219 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 RAB6AP20340 208 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 RAB25P57735 213 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 GABARAPL2P60520 117 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 ECSCRQ19T08 205 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 ZNF660Q6AZW8 331 aaPredicted RBP6.84□□□□□ -1.31
ATG4A-205ENST00000394892 OR4A4PQ8NGN8 299 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 OR1N2Q8NGR9 330 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 DCUN1D4Q92564 292 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms