RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 GLDNQ6ZMI3 551 aaPredicted RBP17.47■□□□□ 0.39
SNX3-202ENST00000349379 OR5AU1Q8NGC0 362 aa17.47■□□□□ 0.39
SNX3-202ENST00000349379 OR8U1Q8NH10 309 aa17.47■□□□□ 0.39
SNX3-202ENST00000349379 ACOT12Q8WYK0 555 aa17.47■□□□□ 0.39
SNX3-202ENST00000349379 C5orf30Q96GV9 206 aa17.47■□□□□ 0.39
SNX3-202ENST00000349379 GINS4Q9BRT9 223 aa17.47■□□□□ 0.39
SNX3-202ENST00000349379 ADARB2-AS1A8MUL3 147 aa17.46■□□□□ 0.39
SNX3-202ENST00000349379 PTHLHP12272 177 aa17.46■□□□□ 0.39
SNX3-202ENST00000349379 MC5RP33032 325 aa17.46■□□□□ 0.39
SNX3-202ENST00000349379 RORCP51449 518 aa17.46■□□□□ 0.39
SNX3-202ENST00000349379 CD83Q01151 205 aa17.46■□□□□ 0.39
SNX3-202ENST00000349379 MMDQ15546 238 aa17.46■□□□□ 0.39
SNX3-202ENST00000349379 C2orf68Q2NKX9 166 aa17.46■□□□□ 0.39
SNX3-202ENST00000349379 SLC35E3Q7Z769 313 aa17.46■□□□□ 0.39
SNX3-202ENST00000349379 HOGA1Q86XE5 327 aa17.46■□□□□ 0.39
SNX3-202ENST00000349379 ZNF383Q8NA42 475 aa17.46■□□□□ 0.39
SNX3-202ENST00000349379 NPBQ8NG41 125 aa17.46■□□□□ 0.39
SNX3-202ENST00000349379 OR2D2Q9H210 308 aa17.46■□□□□ 0.39
SNX3-202ENST00000349379 SDHAF2Q9NX18 166 aa17.46■□□□□ 0.39
SNX3-202ENST00000349379 NDUFA3O95167 84 aa17.45■□□□□ 0.38
SNX3-202ENST00000349379 TSPAN15O95858 294 aa17.45■□□□□ 0.38
SNX3-202ENST00000349379 EIF4EP06730 217 aaKnown RBP17.45■□□□□ 0.38
SNX3-202ENST00000349379 CNTFRP26992 372 aa17.45■□□□□ 0.38
SNX3-202ENST00000349379 TCTEX1D4Q5JR98 221 aa17.45■□□□□ 0.38
SNX3-202ENST00000349379 CENPVQ7Z7K6 275 aaPredicted RBP17.45■□□□□ 0.38
SNX3-202ENST00000349379 GVQW1Q8N7I0 195 aa17.45■□□□□ 0.38
SNX3-202ENST00000349379 BEST4Q8NFU0 473 aa17.45■□□□□ 0.38
SNX3-202ENST00000349379 CITED2Q99967 270 aaPredicted RBP17.45■□□□□ 0.38
SNX3-202ENST00000349379 RASL11BQ9BPW5 248 aa17.45■□□□□ 0.38
SNX3-202ENST00000349379 WASHC3Q9Y3C0 194 aa17.45■□□□□ 0.38
SNX3-202ENST00000349379 VWFP04275 2813 aa17.44■□□□□ 0.38
SNX3-202ENST00000349379 LINC01548A6NM66 108 aa17.44■□□□□ 0.38
SNX3-202ENST00000349379 NBR2O15453 112 aa17.44■□□□□ 0.38
SNX3-202ENST00000349379 APOA1P02647 267 aa17.44■□□□□ 0.38
SNX3-202ENST00000349379 LINC00205P59089 165 aa17.44■□□□□ 0.38
SNX3-202ENST00000349379 TAS2R20P59543 309 aa17.44■□□□□ 0.38
SNX3-202ENST00000349379 C10orf99Q6UWK7 81 aa17.44■□□□□ 0.38
SNX3-202ENST00000349379 NDUFA11Q86Y39 141 aa17.44■□□□□ 0.38
SNX3-202ENST00000349379 DRAXINQ8NBI3 349 aaPredicted RBP17.44■□□□□ 0.38
SNX3-202ENST00000349379 HSPB9Q9BQS6 159 aa17.44■□□□□ 0.38
SNX3-202ENST00000349379 MMP27Q9H306 513 aa17.44■□□□□ 0.38
SNX3-202ENST00000349379 COMMD3Q9UBI1 195 aa17.44■□□□□ 0.38
SNX3-202ENST00000349379 ANAPC10Q9UM13 185 aa17.44■□□□□ 0.38
SNX3-202ENST00000349379 NBEAL1Q6ZS30 2694 aa17.44■□□□□ 0.38
SNX3-202ENST00000349379 M0R1X1 148 aa17.43■□□□□ 0.38
SNX3-202ENST00000349379 KCNAB3O43448 404 aa17.43■□□□□ 0.38
SNX3-202ENST00000349379 RBBP9O75884 186 aa17.43■□□□□ 0.38
SNX3-202ENST00000349379 TUSC2O75896 110 aa17.43■□□□□ 0.38
SNX3-202ENST00000349379 CSF1P09603 554 aa17.43■□□□□ 0.38
SNX3-202ENST00000349379 CBX5P45973 191 aa17.43■□□□□ 0.38
SNX3-202ENST00000349379 TMEM69Q5SWH9 247 aa17.43■□□□□ 0.38
SNX3-202ENST00000349379 FOXRED2Q8IWF2 684 aa17.43■□□□□ 0.38
SNX3-202ENST00000349379 CHPT1Q8WUD6 406 aa17.43■□□□□ 0.38
SNX3-202ENST00000349379 NOL4LQ96MY1 436 aaPredicted RBP17.43■□□□□ 0.38
SNX3-202ENST00000349379 RNF5Q99942 180 aa17.43■□□□□ 0.38
SNX3-202ENST00000349379 ZNF580Q9UK33 172 aa17.43■□□□□ 0.38
SNX3-202ENST00000349379 OR2W1Q9Y3N9 320 aa17.43■□□□□ 0.38
SNX3-202ENST00000349379 PSMB11A5LHX3 300 aa17.42■□□□□ 0.38
SNX3-202ENST00000349379 AP4M1O00189 453 aa17.42■□□□□ 0.38
SNX3-202ENST00000349379 HLA-DRB1P01911 266 aa17.42■□□□□ 0.38
SNX3-202ENST00000349379 HLA-DQB1P01920 261 aa17.42■□□□□ 0.38
SNX3-202ENST00000349379 NFYAP23511 347 aaPredicted RBP17.42■□□□□ 0.38
SNX3-202ENST00000349379 SOX6P35712 828 aa17.42■□□□□ 0.38
SNX3-202ENST00000349379 RPL5P46777 297 aaKnown RBP17.42■□□□□ 0.38
SNX3-202ENST00000349379 C5orf64Q2M2E5 130 aa17.42■□□□□ 0.38
SNX3-202ENST00000349379 STPG2Q8N412 459 aa17.42■□□□□ 0.38
SNX3-202ENST00000349379 SNAPC3Q92966 411 aa17.42■□□□□ 0.38
SNX3-202ENST00000349379 BCL7BQ9BQE9 202 aa17.42■□□□□ 0.38
SNX3-202ENST00000349379 ZNF182P17025 639 aaPredicted RBP17.41■□□□□ 0.38
SNX3-202ENST00000349379 PDPNQ86YL7 162 aa17.41■□□□□ 0.38
SNX3-202ENST00000349379 CLVS1Q8IUQ0 354 aaPredicted RBP17.41■□□□□ 0.38
SNX3-202ENST00000349379 OR4X2Q8NGF9 303 aa17.41■□□□□ 0.38
SNX3-202ENST00000349379 RAB2BQ8WUD1 216 aa17.41■□□□□ 0.38
SNX3-202ENST00000349379 AP3S1Q92572 193 aa17.41■□□□□ 0.38
SNX3-202ENST00000349379 ZNF107Q9UII5 783 aaPredicted RBP17.41■□□□□ 0.38
SNX3-202ENST00000349379 H7C2Y5 167 aa17.4■□□□□ 0.38
SNX3-202ENST00000349379 RRHO14718 337 aa17.4■□□□□ 0.38
SNX3-202ENST00000349379 HPGDSO60760 199 aa17.4■□□□□ 0.38
SNX3-202ENST00000349379 IGKV1-16P04430 117 aa17.4■□□□□ 0.38
SNX3-202ENST00000349379 ELK1P19419 428 aa17.4■□□□□ 0.38
SNX3-202ENST00000349379 TMBIM6P55061 237 aa17.4■□□□□ 0.38
SNX3-202ENST00000349379 SPCS2Q15005 226 aa17.4■□□□□ 0.38
SNX3-202ENST00000349379 DDB2Q92466 427 aa17.4■□□□□ 0.38
SNX3-202ENST00000349379 KIAA1456Q9P272 454 aa17.4■□□□□ 0.38
SNX3-202ENST00000349379 LINC00527Q9UJ94 153 aa17.4■□□□□ 0.38
SNX3-202ENST00000349379 RBM7Q9Y580 266 aaKnown RBP17.4■□□□□ 0.38
SNX3-202ENST00000349379 IGKV1D-13A0A0B4J2D9 117 aa17.39■□□□□ 0.37
SNX3-202ENST00000349379 IGLV2-14P01704 120 aa17.39■□□□□ 0.37
SNX3-202ENST00000349379 APOA2P02652 100 aa17.39■□□□□ 0.37
SNX3-202ENST00000349379 IGF1P05019 195 aa17.39■□□□□ 0.37
SNX3-202ENST00000349379 IGKV1-13P0DP09 117 aa17.39■□□□□ 0.37
SNX3-202ENST00000349379 NAT1P18440 290 aa17.39■□□□□ 0.37
SNX3-202ENST00000349379 DUTP33316 252 aaKnown RBP17.39■□□□□ 0.37
SNX3-202ENST00000349379 THBS3P49746 956 aa17.39■□□□□ 0.37
SNX3-202ENST00000349379 LUMP51884 338 aaPredicted RBP17.39■□□□□ 0.37
SNX3-202ENST00000349379 MZT2AQ6P582 158 aa17.39■□□□□ 0.37
SNX3-202ENST00000349379 ZNF329Q86UD4 541 aa17.39■□□□□ 0.37
SNX3-202ENST00000349379 ZNF645Q8N7E2 425 aa17.39■□□□□ 0.37
SNX3-202ENST00000349379 SLC35D1Q9NTN3 355 aa17.39■□□□□ 0.37
SNX3-202ENST00000349379 IGHV7-81A0A0B4J1V7 117 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms