RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 SIRT5Q9NXA8 310 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 ZNF257Q9Y2Q1 563 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 HTN1P15515 57 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 GALNSP34059 522 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 ALKBH6Q3KRA9 238 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 TTC9CQ8N5M4 171 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 MRGPRX3Q96LB0 322 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 OR8B2Q96RD0 313 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 LINC00470Q9BZP3 86 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 IL36RNQ9UBH0 155 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 KIAA1551Q9HCM1 1747 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 SMAD4Q13485 552 aaKnown RBP5.41□□□□□ -1.54
CSMD1-201ENST00000335551 ZNF660Q6AZW8 331 aaPredicted RBP5.41□□□□□ -1.54
CSMD1-201ENST00000335551 ADAD2Q8NCV1 583 aaKnown RBP5.41□□□□□ -1.54
CSMD1-201ENST00000335551 DENND4AQ7Z401 1863 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 ZNF815PA8K554 130 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 CRYGNQ8WXF5 182 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 DNAJC25-GNG10A0A024R161 153 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 SPRY3O43610 288 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 SYNGR1O43759 233 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 SNAI3Q3KNW1 292 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 MRPL24Q96A35 216 aaKnown RBP5.41□□□□□ -1.54
CSMD1-201ENST00000335551 DIRC2Q96SL1 478 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 LINC00869P0C866 280 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 CA7P43166 264 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 RIPPLY3P57055 190 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 EBLN2Q6P2I7 272 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 ATOH7Q8N100 152 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 SLC25A40Q8TBP6 338 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 SHISA4Q96DD7 197 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 SARGQ9BW04 601 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 CRISPLD2Q9H0B8 497 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 IGHV3-15A0A0B4J1V0 119 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 DANCRP0C864 163 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 CD27P26842 260 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 FCGR2BP31994 310 aaPredicted RBP5.41□□□□□ -1.54
CSMD1-201ENST00000335551 HMGA2P52926 109 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 SEC11AP67812 179 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 ALKAL1Q6UXT8 129 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 TMUB1Q9BVT8 246 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 TMEM56-RWDD3S4R434 201 aa5.41□□□□□ -1.54
CSMD1-201ENST00000335551 TMSB15BA0A087X1C1 80 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 KBTBD11-OT1A0A1B0GTJ5 212 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 GRIFINA4D1Z8 144 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 TMEM249Q2WGJ8 235 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 LYZL2Q7Z4W2 148 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 C10orf111Q8N326 155 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 RAB1CQ92928 201 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 PGPEP1LA6NFU8 196 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 FAM90A26D6RGX4 464 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 OGG1O15527 345 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 VEGFBP49765 207 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 TMPRSS3P57727 454 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 CCDC144NLQ6NUI1 221 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 HMGCLL1Q8TB92 370 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 PXMP4Q9Y6I8 212 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 IGHV3-20A0A0C4DH32 117 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 DLL1O00548 723 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 EML2O95834 649 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 LINC00614P0C842 121 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 CCL11P51671 97 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 LDLRAD2Q5SZI1 272 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 BHLHA15Q7RTS1 189 aaPredicted RBP5.4□□□□□ -1.54
CSMD1-201ENST00000335551 HOGA1Q86XE5 327 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 HIST1H2BAQ96A08 127 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 TM4SF19Q96DZ7 209 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 TMEM222Q9H0R3 208 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 TAF1LQ8IZX4 1826 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 MRPL52Q86TS9 123 aaKnown RBP5.4□□□□□ -1.54
CSMD1-201ENST00000335551 VN1R2Q8NFZ6 395 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 SLC26A1Q9H2B4 701 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 A0A087WWC5 75 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 H7C1H1 209 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 RPS11P62280 158 aaKnown RBP eCLIP5.4□□□□□ -1.54
CSMD1-201ENST00000335551 TNFRSF9Q07011 255 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 MMD2Q8IY49 270 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 VKORC1L1Q8N0U8 176 aa5.4□□□□□ -1.54
CSMD1-201ENST00000335551 SLC25A20O43772 301 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 SUMO2P61956 95 aaKnown RBP5.4□□□□□ -1.55
CSMD1-201ENST00000335551 MGAT2Q10469 447 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 LURAP1LQ8IV03 231 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 AMER3Q8N944 861 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 OR4A5Q8NH83 315 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 ASB10Q8WXI3 467 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 TBC1D29Q9UFV1 150 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 STRCP1A6NGW2 1772 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 HOXD4P09016 255 aaPredicted RBP5.4□□□□□ -1.55
CSMD1-201ENST00000335551 RFESDQ8TAC1 157 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 PHLDA1Q8WV24 401 aaPredicted RBP5.4□□□□□ -1.55
CSMD1-201ENST00000335551 NUDT8Q8WV74 236 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 SPSB4Q96A44 273 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 NEU1Q99519 415 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 THAP10Q9P2Z0 257 aaPredicted RBP5.4□□□□□ -1.55
CSMD1-201ENST00000335551 MRM2Q9UI43 246 aaKnown RBP5.4□□□□□ -1.55
CSMD1-201ENST00000335551 DSCAML1Q8TD84 2053 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 LOC285556D6RIA3 1793 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 NKX2-8O15522 239 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 CTSVO60911 334 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 ERGP11308 486 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 HOXA5P20719 270 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms