RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 NOL4LQ96MY1 436 aaPredicted RBP19.9■□□□□ 0.78
PDF-201ENST00000288022 AUNIPQ9H7T9 357 aa19.9■□□□□ 0.78
PDF-201ENST00000288022 PSMB11A5LHX3 300 aa19.89■□□□□ 0.77
PDF-201ENST00000288022 M0R1X1 148 aa19.89■□□□□ 0.77
PDF-201ENST00000288022 C10orf99Q6UWK7 81 aa19.89■□□□□ 0.77
PDF-201ENST00000288022 H1FOOQ8IZA3 346 aaPredicted RBP19.89■□□□□ 0.77
PDF-201ENST00000288022 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.89■□□□□ 0.77
PDF-201ENST00000288022 CHPT1Q8WUD6 406 aa19.89■□□□□ 0.77
PDF-201ENST00000288022 RITA1Q96K30 269 aa19.89■□□□□ 0.77
PDF-201ENST00000288022 LINC00527Q9UJ94 153 aa19.89■□□□□ 0.77
PDF-201ENST00000288022 WASHC3Q9Y3C0 194 aa19.89■□□□□ 0.77
PDF-201ENST00000288022 H0YJW9 148 aa19.88■□□□□ 0.77
PDF-201ENST00000288022 NBR2O15453 112 aa19.88■□□□□ 0.77
PDF-201ENST00000288022 XRCC3O43542 346 aa19.88■□□□□ 0.77
PDF-201ENST00000288022 TFAP2AP05549 437 aa19.88■□□□□ 0.77
PDF-201ENST00000288022 CTXN2P0C2S0 81 aa19.88■□□□□ 0.77
PDF-201ENST00000288022 CNTFRP26992 372 aa19.88■□□□□ 0.77
PDF-201ENST00000288022 SOX6P35712 828 aa19.88■□□□□ 0.77
PDF-201ENST00000288022 ALDH3B2P48448 385 aa19.88■□□□□ 0.77
PDF-201ENST00000288022 CTF1Q16619 201 aa19.88■□□□□ 0.77
PDF-201ENST00000288022 NDUFA11Q86Y39 141 aa19.88■□□□□ 0.77
PDF-201ENST00000288022 KIAA1456Q9P272 454 aa19.88■□□□□ 0.77
PDF-201ENST00000288022 COMMD3Q9UBI1 195 aa19.88■□□□□ 0.77
PDF-201ENST00000288022 ANXA10Q9UJ72 324 aa19.88■□□□□ 0.77
PDF-201ENST00000288022 TCRBV4S1A1TA0A5B7 111 aa19.87■□□□□ 0.77
PDF-201ENST00000288022 LINC01548A6NM66 108 aa19.87■□□□□ 0.77
PDF-201ENST00000288022 KCNAB3O43448 404 aa19.87■□□□□ 0.77
PDF-201ENST00000288022 PROP1O75360 226 aa19.87■□□□□ 0.77
PDF-201ENST00000288022 PTHLHP12272 177 aa19.87■□□□□ 0.77
PDF-201ENST00000288022 RORCP51449 518 aa19.87■□□□□ 0.77
PDF-201ENST00000288022 TMEM69Q5SWH9 247 aa19.87■□□□□ 0.77
PDF-201ENST00000288022 CNIH2Q6PI25 160 aa19.87■□□□□ 0.77
PDF-201ENST00000288022 ZNF329Q86UD4 541 aa19.87■□□□□ 0.77
PDF-201ENST00000288022 BEST4Q8NFU0 473 aa19.87■□□□□ 0.77
PDF-201ENST00000288022 OR5AN1Q8NGI8 311 aa19.87■□□□□ 0.77
PDF-201ENST00000288022 A0A1W2PRX2 142 aa19.86■□□□□ 0.77
PDF-201ENST00000288022 J3QRK9 145 aa19.86■□□□□ 0.77
PDF-201ENST00000288022 AP4M1O00189 453 aa19.86■□□□□ 0.77
PDF-201ENST00000288022 APOA2P02652 100 aa19.86■□□□□ 0.77
PDF-201ENST00000288022 ARPC4P59998 168 aa19.86■□□□□ 0.77
PDF-201ENST00000288022 KHDC1LQ5JSQ8 128 aa19.86■□□□□ 0.77
PDF-201ENST00000288022 GVQW1Q8N7I0 195 aa19.86■□□□□ 0.77
PDF-201ENST00000288022 ZNF383Q8NA42 475 aa19.86■□□□□ 0.77
PDF-201ENST00000288022 HSPB9Q9BQS6 159 aa19.86■□□□□ 0.77
PDF-201ENST00000288022 SDHAF2Q9NX18 166 aa19.86■□□□□ 0.77
PDF-201ENST00000288022 ZNF107Q9UII5 783 aaPredicted RBP19.86■□□□□ 0.77
PDF-201ENST00000288022 OPN1MWP04001 364 aa19.85■□□□□ 0.77
PDF-201ENST00000288022 FCER2P06734 321 aa19.85■□□□□ 0.77
PDF-201ENST00000288022 OPN1MW2P0DN77 364 aa19.85■□□□□ 0.77
PDF-201ENST00000288022 OPN1MW3P0DN78 364 aa19.85■□□□□ 0.77
PDF-201ENST00000288022 NFYAP23511 347 aaPredicted RBP19.85■□□□□ 0.77
PDF-201ENST00000288022 LINC00205P59089 165 aa19.85■□□□□ 0.77
PDF-201ENST00000288022 SLC35B1P78383 322 aa19.85■□□□□ 0.77
PDF-201ENST00000288022 CD83Q01151 205 aa19.85■□□□□ 0.77
PDF-201ENST00000288022 STPG2Q8N412 459 aa19.85■□□□□ 0.77
PDF-201ENST00000288022 ACOT12Q8WYK0 555 aa19.85■□□□□ 0.77
PDF-201ENST00000288022 GAB2Q9UQC2 676 aa19.85■□□□□ 0.77
PDF-201ENST00000288022 MEIS3P1A6NDR6 274 aa19.84■□□□□ 0.77
PDF-201ENST00000288022 RBBP9O75884 186 aa19.84■□□□□ 0.77
PDF-201ENST00000288022 EIF4EP06730 217 aaKnown RBP19.84■□□□□ 0.77
PDF-201ENST00000288022 CBX5P45973 191 aa19.84■□□□□ 0.77
PDF-201ENST00000288022 TAS2R20P59543 309 aa19.84■□□□□ 0.77
PDF-201ENST00000288022 PLGLAQ15195 96 aa19.84■□□□□ 0.77
PDF-201ENST00000288022 C5orf64Q2M2E5 130 aa19.84■□□□□ 0.77
PDF-201ENST00000288022 TCTEX1D4Q5JR98 221 aa19.84■□□□□ 0.77
PDF-201ENST00000288022 HOGA1Q86XE5 327 aa19.84■□□□□ 0.77
PDF-201ENST00000288022 NPBQ8NG41 125 aa19.84■□□□□ 0.77
PDF-201ENST00000288022 LUMP51884 338 aaPredicted RBP19.83■□□□□ 0.77
PDF-201ENST00000288022 R3HDM4Q96D70 268 aa19.83■□□□□ 0.77
PDF-201ENST00000288022 IFT46Q9NQC8 304 aa19.83■□□□□ 0.77
PDF-201ENST00000288022 SLC35D1Q9NTN3 355 aa19.83■□□□□ 0.77
PDF-201ENST00000288022 OR2W1Q9Y3N9 320 aa19.83■□□□□ 0.77
PDF-201ENST00000288022 TSSC4Q9Y5U2 329 aaPredicted RBP19.83■□□□□ 0.77
PDF-201ENST00000288022 SMIM31A0A1B0GVY4 71 aa19.82■□□□□ 0.76
PDF-201ENST00000288022 ADARB2-AS1A8MUL3 147 aa19.82■□□□□ 0.76
PDF-201ENST00000288022 NDUFA3O95167 84 aa19.82■□□□□ 0.76
PDF-201ENST00000288022 RPS16P62249 146 aaKnown RBP19.82■□□□□ 0.76
PDF-201ENST00000288022 LIN54Q6MZP7 749 aa19.82■□□□□ 0.76
PDF-201ENST00000288022 MZT2AQ6P582 158 aa19.82■□□□□ 0.76
PDF-201ENST00000288022 PDPNQ86YL7 162 aa19.82■□□□□ 0.76
PDF-201ENST00000288022 CLVS1Q8IUQ0 354 aaPredicted RBP19.82■□□□□ 0.76
PDF-201ENST00000288022 OR4F17Q8NGA8 305 aa19.82■□□□□ 0.76
PDF-201ENST00000288022 AP3S1Q92572 193 aa19.82■□□□□ 0.76
PDF-201ENST00000288022 OR4F4Q96R69 305 aa19.82■□□□□ 0.76
PDF-201ENST00000288022 GON7Q9BXV9 100 aa19.82■□□□□ 0.76
PDF-201ENST00000288022 FBXL15Q9H469 300 aa19.82■□□□□ 0.76
PDF-201ENST00000288022 RRHO14718 337 aa19.81■□□□□ 0.76
PDF-201ENST00000288022 HPGDSO60760 199 aa19.81■□□□□ 0.76
PDF-201ENST00000288022 HLA-DRB1P01911 266 aa19.81■□□□□ 0.76
PDF-201ENST00000288022 APOA1P02647 267 aa19.81■□□□□ 0.76
PDF-201ENST00000288022 IGKV1-16P04430 117 aa19.81■□□□□ 0.76
PDF-201ENST00000288022 C5orf30Q96GV9 206 aa19.81■□□□□ 0.76
PDF-201ENST00000288022 CMTM3Q96MX0 182 aa19.81■□□□□ 0.76
PDF-201ENST00000288022 RNF5Q99942 180 aa19.81■□□□□ 0.76
PDF-201ENST00000288022 NBEAL1Q6ZS30 2694 aa19.8■□□□□ 0.76
PDF-201ENST00000288022 ZNF182P17025 639 aaPredicted RBP19.8■□□□□ 0.76
PDF-201ENST00000288022 VDAC1P21796 283 aa19.8■□□□□ 0.76
PDF-201ENST00000288022 THBS3P49746 956 aa19.8■□□□□ 0.76
PDF-201ENST00000288022 CBX3Q13185 183 aa19.8■□□□□ 0.76
PDF-201ENST00000288022 FLYWCH2Q96CP2 140 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms