RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 ANKRD34BA5PLL1 514 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 NDUFB3O43676 98 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 SPDEFO95238 335 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 IFNA7P01567 189 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 CGB3P0DN86 165 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 CGB7P0DN87 165 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 EPHA1P21709 976 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 VDAC1P21796 283 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 ZNF134P52741 427 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 ERVFRD-1P60508 538 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 RPL31P62899 125 aaKnown RBP12.55□□□□□ -0.4
HIF3A-218ENST00000600383 EDARADDQ8WWZ3 215 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 C5orf30Q96GV9 206 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 CBLN4Q9NTU7 201 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 LIN7CQ9NUP9 197 aaKnown RBP12.55□□□□□ -0.4
HIF3A-218ENST00000600383 LAMP3Q9UQV4 416 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 hADV38S2A0JD32 116 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 F2RL2O00254 374 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 NXPH3O95157 252 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 RPL30P62888 115 aaKnown RBP12.55□□□□□ -0.4
HIF3A-218ENST00000600383 ZNF345Q14585 488 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 Q3ZCU0 254 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 USF3Q68DE3 2245 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 TCF23Q7RTU1 214 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 PCNPQ8WW12 178 aaKnown RBP12.55□□□□□ -0.4
HIF3A-218ENST00000600383 RAB1BQ9H0U4 201 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 NCOR1P1Q9H4R4 102 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 ZC4H2Q9NQZ6 224 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 C19orf12Q9NSK7 152 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 SDHAF2Q9NX18 166 aa12.55□□□□□ -0.4
HIF3A-218ENST00000600383 MSGN1A6NI15 193 aa12.54□□□□□ -0.4
HIF3A-218ENST00000600383 RNF212BA8MTL3 300 aa12.54□□□□□ -0.4
HIF3A-218ENST00000600383 B8ZZF3 427 aa12.54□□□□□ -0.4
HIF3A-218ENST00000600383 DVL1O14640 695 aa12.54□□□□□ -0.4
HIF3A-218ENST00000600383 YPEL1O60688 119 aa12.54□□□□□ -0.4
HIF3A-218ENST00000600383 DEDDO75618 318 aa12.54□□□□□ -0.4
HIF3A-218ENST00000600383 FCN3O75636 299 aa12.54□□□□□ -0.4
HIF3A-218ENST00000600383 GPR12P47775 334 aa12.54□□□□□ -0.4
HIF3A-218ENST00000600383 IZUMO4Q1ZYL8 232 aa12.54□□□□□ -0.4
HIF3A-218ENST00000600383 LRRC10Q5BKY1 277 aa12.54□□□□□ -0.4
HIF3A-218ENST00000600383 ZBTB34Q8NCN2 500 aa12.54□□□□□ -0.4
HIF3A-218ENST00000600383 YPEL2Q96QA6 119 aa12.54□□□□□ -0.4
HIF3A-218ENST00000600383 ZNF471Q9BX82 626 aaPredicted RBP12.54□□□□□ -0.4
HIF3A-218ENST00000600383 DSCAML1Q8TD84 2053 aa12.54□□□□□ -0.4
HIF3A-218ENST00000600383 DCHS2Q6V1P9 2916 aa12.54□□□□□ -0.4
HIF3A-218ENST00000600383 EPG5Q9HCE0 2579 aa12.54□□□□□ -0.4
HIF3A-218ENST00000600383 A0A1W2PPR1 153 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 K7EPK0 472 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 RAMP3O60896 148 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 B3GALNT1O75752 331 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 MMP23AO75900 390 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 CLDN1O95832 211 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 PPOXP50336 477 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 AKR1C2P52895 323 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 ZNF585BQ52M93 769 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 ALKAL2Q6UX46 152 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 FAM71E2Q8N5Q1 922 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 TCTEX1D2Q8WW35 142 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 BBC3Q96PG8 261 aaPredicted RBP12.53□□□□□ -0.4
HIF3A-218ENST00000600383 RAB9BQ9NP90 201 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 CTSZQ9UBR2 303 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 UBQLN2Q9UHD9 624 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 F5H0A9 414 aaPredicted RBP12.53□□□□□ -0.4
HIF3A-218ENST00000600383 TNFRSF13BO14836 293 aaPredicted RBP12.53□□□□□ -0.4
HIF3A-218ENST00000600383 ST8SIA3O43173 380 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 IGKV1-39P01597 117 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 IGKV1D-39P04432 117 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 LYL1P12980 280 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 LPAR6P43657 344 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 ZNF816Q0VGE8 651 aaPredicted RBP12.53□□□□□ -0.4
HIF3A-218ENST00000600383 ZNF273Q14593 569 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 NMSQ5H8A3 153 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 CXorf66Q5JRM2 361 aaPredicted RBP12.53□□□□□ -0.4
HIF3A-218ENST00000600383 AVPI1Q5T686 147 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 IL22RA2Q969J5 263 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 SPIN2AQ99865 258 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 SPIN2BQ9BPZ2 258 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 TANC2Q9HCD6 1990 aa12.53□□□□□ -0.4
HIF3A-218ENST00000600383 A0A0G2JRQ6 117 aa12.52□□□□□ -0.4
HIF3A-218ENST00000600383 ZNF729A6NN14 1252 aaPredicted RBP12.52□□□□□ -0.4
HIF3A-218ENST00000600383 SLC31A2O15432 143 aa12.52□□□□□ -0.4
HIF3A-218ENST00000600383 NKX2-1P43699 371 aaPredicted RBP12.52□□□□□ -0.4
HIF3A-218ENST00000600383 CATR1Q13166 79 aa12.52□□□□□ -0.4
HIF3A-218ENST00000600383 PRAMEF5Q5TYX0 476 aa12.52□□□□□ -0.4
HIF3A-218ENST00000600383 TMEM200BQ69YZ2 307 aa12.52□□□□□ -0.4
HIF3A-218ENST00000600383 SLC51BQ86UW2 128 aa12.52□□□□□ -0.4
HIF3A-218ENST00000600383 SPAG16Q8N0X2 631 aa12.52□□□□□ -0.4
HIF3A-218ENST00000600383 OR4D5Q8NGN0 318 aa12.52□□□□□ -0.4
HIF3A-218ENST00000600383 MAGT1Q9H0U3 335 aa12.52□□□□□ -0.4
HIF3A-218ENST00000600383 GFOD1Q9NXC2 390 aa12.52□□□□□ -0.4
HIF3A-218ENST00000600383 LINC00312Q9Y6C7 94 aa12.52□□□□□ -0.4
HIF3A-218ENST00000600383 COL12A1Q99715 3063 aa12.52□□□□□ -0.41
HIF3A-218ENST00000600383 DUXBA0A1W2PPF3 345 aa12.52□□□□□ -0.41
HIF3A-218ENST00000600383 LINC00473A8K010 186 aa12.52□□□□□ -0.41
HIF3A-218ENST00000600383 C17orf98A8MV24 154 aa12.52□□□□□ -0.41
HIF3A-218ENST00000600383 BCL2L11O43521 198 aa12.52□□□□□ -0.41
HIF3A-218ENST00000600383 CCL3L1P16619 93 aa12.52□□□□□ -0.41
HIF3A-218ENST00000600383 GNG10P50151 68 aa12.52□□□□□ -0.41
HIF3A-218ENST00000600383 RPL39P5Q59GN2 51 aa12.52□□□□□ -0.41
HIF3A-218ENST00000600383 CORO2AQ92828 525 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms