RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 MRPS15P82914 257 aaKnown RBP11.93□□□□□ -0.5
TRIM28-205ENST00000595028 NEDD8Q15843 81 aa11.93□□□□□ -0.5
TRIM28-205ENST00000595028 KHDC1LQ5JSQ8 128 aa11.93□□□□□ -0.5
TRIM28-205ENST00000595028 FAM71E2Q8N5Q1 922 aa11.93□□□□□ -0.5
TRIM28-205ENST00000595028 EDARADDQ8WWZ3 215 aa11.93□□□□□ -0.5
TRIM28-205ENST00000595028 ABCG5Q9H222 651 aa11.93□□□□□ -0.5
TRIM28-205ENST00000595028 OR51E2Q9H255 320 aa11.93□□□□□ -0.5
TRIM28-205ENST00000595028 PIPOXQ9P0Z9 390 aa11.93□□□□□ -0.5
TRIM28-205ENST00000595028 SSR3Q9UNL2 185 aa11.93□□□□□ -0.5
TRIM28-205ENST00000595028 IGKV1-6A0A0C4DH72 117 aa11.92□□□□□ -0.5
TRIM28-205ENST00000595028 METTL21EPA6NDL7 271 aa11.92□□□□□ -0.5
TRIM28-205ENST00000595028 AP4M1O00189 453 aa11.92□□□□□ -0.5
TRIM28-205ENST00000595028 HSPA12AO43301 675 aa11.92□□□□□ -0.5
TRIM28-205ENST00000595028 FCGR3AP08637 254 aa11.92□□□□□ -0.5
TRIM28-205ENST00000595028 SCTP09683 121 aa11.92□□□□□ -0.5
TRIM28-205ENST00000595028 HIST1H1DP16402 221 aaKnown RBP11.92□□□□□ -0.5
TRIM28-205ENST00000595028 ZBTB25P24278 435 aa11.92□□□□□ -0.5
TRIM28-205ENST00000595028 MMDQ15546 238 aa11.92□□□□□ -0.5
TRIM28-205ENST00000595028 ZNF329Q86UD4 541 aa11.92□□□□□ -0.5
TRIM28-205ENST00000595028 TPRA1Q86W33 373 aa11.92□□□□□ -0.5
TRIM28-205ENST00000595028 STPG2Q8N412 459 aa11.92□□□□□ -0.5
TRIM28-205ENST00000595028 RASL11BQ9BPW5 248 aa11.92□□□□□ -0.5
TRIM28-205ENST00000595028 ZNF251Q9BRH9 671 aa11.92□□□□□ -0.5
TRIM28-205ENST00000595028 AGMATQ9BSE5 352 aa11.92□□□□□ -0.5
TRIM28-205ENST00000595028 LINC00527Q9UJ94 153 aa11.92□□□□□ -0.5
TRIM28-205ENST00000595028 A0A075B6Q4 140 aa11.91□□□□□ -0.5
TRIM28-205ENST00000595028 TRDCB7Z8K6 153 aa11.91□□□□□ -0.5
TRIM28-205ENST00000595028 RAB29O14966 203 aa11.91□□□□□ -0.5
TRIM28-205ENST00000595028 PF4V1P10720 104 aa11.91□□□□□ -0.5
TRIM28-205ENST00000595028 GNB3P16520 340 aa11.91□□□□□ -0.5
TRIM28-205ENST00000595028 F2RL1P55085 397 aa11.91□□□□□ -0.5
TRIM28-205ENST00000595028 ACTBP60709 375 aa11.91□□□□□ -0.5
TRIM28-205ENST00000595028 RPL39P5Q59GN2 51 aa11.91□□□□□ -0.5
TRIM28-205ENST00000595028 SAMD5Q5TGI4 173 aa11.91□□□□□ -0.5
TRIM28-205ENST00000595028 SFXN4Q6P4A7 337 aa11.91□□□□□ -0.5
TRIM28-205ENST00000595028 ABHD14BQ96IU4 210 aa11.91□□□□□ -0.5
TRIM28-205ENST00000595028 KCTD7Q96MP8 289 aa11.91□□□□□ -0.5
TRIM28-205ENST00000595028 CHCHD6Q9BRQ6 235 aa11.91□□□□□ -0.5
TRIM28-205ENST00000595028 C11orf54Q9H0W9 315 aaPredicted RBP11.91□□□□□ -0.5
TRIM28-205ENST00000595028 OR5H14A6NHG9 310 aa11.9□□□□□ -0.5
TRIM28-205ENST00000595028 LINC01548A6NM66 108 aa11.9□□□□□ -0.5
TRIM28-205ENST00000595028 G3V4G9 280 aa11.9□□□□□ -0.5
TRIM28-205ENST00000595028 FABP7O15540 132 aa11.9□□□□□ -0.5
TRIM28-205ENST00000595028 SOX6P35712 828 aa11.9□□□□□ -0.5
TRIM28-205ENST00000595028 CEACAM6P40199 344 aa11.9□□□□□ -0.5
TRIM28-205ENST00000595028 SLC35B1P78383 322 aa11.9□□□□□ -0.5
TRIM28-205ENST00000595028 KIR2DS1Q14954 304 aa11.9□□□□□ -0.5
TRIM28-205ENST00000595028 FAM131AQ6UXB0 335 aa11.9□□□□□ -0.5
TRIM28-205ENST00000595028 COMMD1Q8N668 190 aa11.9□□□□□ -0.5
TRIM28-205ENST00000595028 OR4A4PQ8NGN8 299 aa11.9□□□□□ -0.5
TRIM28-205ENST00000595028 LGALS14Q8TCE9 139 aa11.9□□□□□ -0.5
TRIM28-205ENST00000595028 HSPB9Q9BQS6 159 aa11.9□□□□□ -0.5
TRIM28-205ENST00000595028 CABLES2Q9BTV7 478 aa11.9□□□□□ -0.5
TRIM28-205ENST00000595028 GHITMQ9H3K2 345 aa11.9□□□□□ -0.5
TRIM28-205ENST00000595028 DAPK2Q9UIK4 370 aa11.9□□□□□ -0.5
TRIM28-205ENST00000595028 LOC100506127A0A0U1RQW1 187 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 NBR2O15453 112 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 DIRAS3O95661 229 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 CT45A6P0DMU7 189 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 CT45A5P0DMU8 189 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 CT45A7P0DMV0 189 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 CD36P16671 472 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 SDC2P34741 201 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 SERPINB10P48595 397 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 RPL23AP62750 156 aaKnown RBP11.89□□□□□ -0.51
TRIM28-205ENST00000595028 ARL6IP1Q15041 203 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 BEAN1Q3B7T3 259 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 PHF21AQ96BD5 680 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 RITA1Q96K30 269 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 TOLLIPQ9H0E2 274 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 ATG5Q9H1Y0 275 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 RNF167Q9H6Y7 350 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRIM28-205ENST00000595028 RDH8Q9NYR8 311 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 ZNF107Q9UII5 783 aaPredicted RBP11.89□□□□□ -0.51
TRIM28-205ENST00000595028 ZNF580Q9UK33 172 aa11.89□□□□□ -0.51
TRIM28-205ENST00000595028 TENM3Q9P273 2699 aa11.88□□□□□ -0.51
TRIM28-205ENST00000595028 H0YJW9 148 aa11.88□□□□□ -0.51
TRIM28-205ENST00000595028 HLA-DRB1P01911 266 aa11.88□□□□□ -0.51
TRIM28-205ENST00000595028 PF4P02776 101 aa11.88□□□□□ -0.51
TRIM28-205ENST00000595028 CLEC2LP0C7M8 214 aa11.88□□□□□ -0.51
TRIM28-205ENST00000595028 SNRPBP14678 240 aaKnown RBP11.88□□□□□ -0.51
TRIM28-205ENST00000595028 CNTFRP26992 372 aa11.88□□□□□ -0.51
TRIM28-205ENST00000595028 MXD1Q05195 221 aa11.88□□□□□ -0.51
TRIM28-205ENST00000595028 ARFRP1Q13795 201 aa11.88□□□□□ -0.51
TRIM28-205ENST00000595028 KPRPQ5T749 579 aaPredicted RBP11.88□□□□□ -0.51
TRIM28-205ENST00000595028 GLDNQ6ZMI3 551 aaPredicted RBP11.88□□□□□ -0.51
TRIM28-205ENST00000595028 MAFIPQ8WZ33 124 aa11.88□□□□□ -0.51
TRIM28-205ENST00000595028 CENPOQ9BU64 300 aa11.88□□□□□ -0.51
TRIM28-205ENST00000595028 ZNF230Q9UIE0 474 aaPredicted RBP11.88□□□□□ -0.51
TRIM28-205ENST00000595028 BET1O15155 118 aa11.87□□□□□ -0.51
TRIM28-205ENST00000595028 SCGNO76038 276 aa11.87□□□□□ -0.51
TRIM28-205ENST00000595028 NDUFA3O95167 84 aa11.87□□□□□ -0.51
TRIM28-205ENST00000595028 TNFAIP8O95379 198 aa11.87□□□□□ -0.51
TRIM28-205ENST00000595028 CFHR3Q02985 330 aa11.87□□□□□ -0.51
TRIM28-205ENST00000595028 C5orf64Q2M2E5 130 aa11.87□□□□□ -0.51
TRIM28-205ENST00000595028 IGSF11Q5DX21 431 aa11.87□□□□□ -0.51
TRIM28-205ENST00000595028 Q6ZS49 121 aa11.87□□□□□ -0.51
TRIM28-205ENST00000595028 NPBQ8NG41 125 aa11.87□□□□□ -0.51
TRIM28-205ENST00000595028 OR5AN1Q8NGI8 311 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms