RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 NCS1P62166 190 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 RPS11P62280 158 aaKnown RBP eCLIP5.17□□□□□ -1.58
ATXN3-236ENST00000556220 RPS25P62851 125 aaKnown RBP5.17□□□□□ -1.58
ATXN3-236ENST00000556220 SCN1BQ07699 218 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 TBCEQ15813 527 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-236ENST00000556220 LTC4SQ16873 150 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 C4orf46Q504U0 113 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 NXNL2Q5VZ03 156 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 Q6P435 159 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 TMEM91Q6ZNR0 172 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 PLEKHG7Q6ZR37 379 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 LHFPL3Q86UP9 236 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 ZNF679Q8IYX0 411 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 ELMOD2Q8IZ81 293 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 NANOGP1Q8N7R0 232 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 YIPF7Q8N8F6 280 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 OR10A7Q8NGE5 316 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 OR13C5Q8NGS8 318 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 RFESDQ8TAC1 157 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 TEX47Q8TBZ9 253 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 ORAI1Q96D31 301 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 BORCS8Q96FH0 119 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 GFI1Q99684 422 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 FUNDC2Q9BWH2 189 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 YIPF3Q9GZM5 350 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 COMMD4Q9H0A8 199 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 VCXQ9H320 206 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 NCOR1P1Q9H4R4 102 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 PLEKHA3Q9HB20 300 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 PLEKHA1Q9HB21 404 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 HMG20AQ9NP66 347 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 DIMT1Q9UNQ2 313 aaKnown RBP5.17□□□□□ -1.58
ATXN3-236ENST00000556220 APOBP04114 4563 aaKnown RBP5.16□□□□□ -1.58
ATXN3-236ENST00000556220 A0A087WXM4 84 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 IGHV7-81A0A0B4J1V7 117 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 A0A1B0GVY2 172 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 SLC33A1O00400 549 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-236ENST00000556220 RGS10O43665 173 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 SOX15O60248 233 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 GATBO75879 557 aaKnown RBP5.16□□□□□ -1.58
ATXN3-236ENST00000556220 TPPPO94811 219 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 GABARAPO95166 117 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 CYB5AP00167 134 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 IGHV3-11P01762 117 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 ZNF44P15621 663 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 CCL1P22362 96 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 GADD45AP24522 165 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 GLP1RP43220 463 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 ATP1B3P54709 279 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 EWSR1Q01844 656 aaKnown RBP eCLIP5.16□□□□□ -1.58
ATXN3-236ENST00000556220 ATXN7L3Q14CW9 347 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-236ENST00000556220 GPR107Q5VW38 600 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 LINC00336Q6ZUF6 198 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 Q8N402 240 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 LINC00311Q8N616 119 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 CHST4Q8NCG5 386 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 SETD9Q8NE22 299 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 OR13A1Q8NGR1 328 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 OR10AC1Q8NH08 325 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 RTN4IP1Q8WWV3 396 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-236ENST00000556220 PGLYRP3Q96LB9 341 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 NEU1Q99519 415 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 TBX5Q99593 518 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 APOL4Q9BPW4 351 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 OVOL2Q9BRP0 275 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 CENPOQ9BU64 300 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 BARHL1Q9BZE3 327 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 OR51E2Q9H255 320 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 Q9H521 79 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 MOB1AQ9H8S9 216 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 PARP11Q9NR21 331 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 ETAA1Q9NY74 926 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 SIGLEC8Q9NYZ4 499 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 CNOT2Q9NZN8 540 aaKnown RBP5.16□□□□□ -1.58
ATXN3-236ENST00000556220 OR52A1Q9UKL2 312 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 UBR4Q5T4S7 5183 aa5.16□□□□□ -1.58
ATXN3-236ENST00000556220 MEIKINA0A087WXM9 373 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 A0A1W2PN81 502 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 A0A1W2PQL4 384 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-236ENST00000556220 IZUMO1RA6ND01 250 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 LOC110117498-PIK3R3F6TDL0 507 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 DEGS1O15121 323 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 SC5DO75845 299 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 SERPINA3P01011 423 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 HLA-DRB1P01911 266 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 ZP3P21754 424 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 BLVRBP30043 206 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-236ENST00000556220 CHRNA7P36544 502 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 RBP2P50120 134 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 MTCP1P56278 107 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 CD81P60033 236 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 PDZK1IP1Q13113 114 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 KLF5Q13887 457 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-236ENST00000556220 MMDQ15546 238 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 CT83Q5H943 113 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 SLC35D3Q5M8T2 416 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 BCL2L15Q5TBC7 163 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 LCN12Q6JVE5 192 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 RDH10Q8IZV5 341 aa5.15□□□□□ -1.59
ATXN3-236ENST00000556220 DEFB125Q8N687 156 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms