RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 OR1A1Q9P1Q5 309 aa12.6□□□□□ -0.39
TSKU-204ENST00000533752 NCBP2LA6PVI3 153 aaKnown RBP12.59□□□□□ -0.39
TSKU-204ENST00000533752 PNLIPRP3Q17RR3 467 aa12.59□□□□□ -0.39
TSKU-204ENST00000533752 CDNFQ49AH0 187 aa12.59□□□□□ -0.39
TSKU-204ENST00000533752 C9orf152Q5JTZ5 239 aa12.59□□□□□ -0.39
TSKU-204ENST00000533752 OR13F1Q8NGS4 319 aa12.59□□□□□ -0.39
TSKU-204ENST00000533752 OR10J5Q8NHC4 309 aa12.59□□□□□ -0.39
TSKU-204ENST00000533752 WIPF2Q8TF74 440 aaPredicted RBP12.59□□□□□ -0.39
TSKU-204ENST00000533752 NABP2Q9BQ15 211 aa12.59□□□□□ -0.39
TSKU-204ENST00000533752 FUNDC2Q9BWH2 189 aa12.59□□□□□ -0.39
TSKU-204ENST00000533752 MMP27Q9H306 513 aa12.59□□□□□ -0.39
TSKU-204ENST00000533752 LIN7CQ9NUP9 197 aaKnown RBP12.59□□□□□ -0.39
TSKU-204ENST00000533752 SPATA2Q9UM82 520 aa12.59□□□□□ -0.39
TSKU-204ENST00000533752 TRRAPQ9Y4A5 3859 aa12.59□□□□□ -0.39
TSKU-204ENST00000533752 IGKV1-6A0A0C4DH72 117 aa12.58□□□□□ -0.4
TSKU-204ENST00000533752 OR5H14A6NHG9 310 aa12.58□□□□□ -0.4
TSKU-204ENST00000533752 CSF1P09603 554 aa12.58□□□□□ -0.4
TSKU-204ENST00000533752 SMIM18P0DKX4 95 aa12.58□□□□□ -0.4
TSKU-204ENST00000533752 OR3A3P47888 321 aa12.58□□□□□ -0.4
TSKU-204ENST00000533752 GNG2P59768 71 aa12.58□□□□□ -0.4
TSKU-204ENST00000533752 SLC25A38Q96DW6 304 aa12.58□□□□□ -0.4
TSKU-204ENST00000533752 AGMATQ9BSE5 352 aa12.58□□□□□ -0.4
TSKU-204ENST00000533752 MRPS26Q9BYN8 205 aaKnown RBP12.58□□□□□ -0.4
TSKU-204ENST00000533752 TOLLIPQ9H0E2 274 aa12.58□□□□□ -0.4
TSKU-204ENST00000533752 C11orf54Q9H0W9 315 aaPredicted RBP12.58□□□□□ -0.4
TSKU-204ENST00000533752 DCSTAMPQ9H295 470 aa12.58□□□□□ -0.4
TSKU-204ENST00000533752 RDH8Q9NYR8 311 aa12.58□□□□□ -0.4
TSKU-204ENST00000533752 ZNF221Q9UK13 617 aa12.58□□□□□ -0.4
TSKU-204ENST00000533752 PKD1L1Q8TDX9 2849 aa12.58□□□□□ -0.4
TSKU-204ENST00000533752 WNK1Q9H4A3 2382 aa12.58□□□□□ -0.4
TSKU-204ENST00000533752 TET2Q6N021 2002 aaPredicted RBP12.57□□□□□ -0.4
TSKU-204ENST00000533752 TRBV6-7A0A0A0MS04 114 aa12.57□□□□□ -0.4
TSKU-204ENST00000533752 TMEM235A6NFC5 223 aa12.57□□□□□ -0.4
TSKU-204ENST00000533752 ZNF736B4DX44 427 aaPredicted RBP12.57□□□□□ -0.4
TSKU-204ENST00000533752 BET1O15155 118 aa12.57□□□□□ -0.4
TSKU-204ENST00000533752 KCNAB3O43448 404 aa12.57□□□□□ -0.4
TSKU-204ENST00000533752 GPR12P47775 334 aa12.57□□□□□ -0.4
TSKU-204ENST00000533752 LSM3P62310 102 aaKnown RBP12.57□□□□□ -0.4
TSKU-204ENST00000533752 ZNF260Q3ZCT1 412 aa12.57□□□□□ -0.4
TSKU-204ENST00000533752 CENPVQ7Z7K6 275 aaPredicted RBP12.57□□□□□ -0.4
TSKU-204ENST00000533752 FOXRED2Q8IWF2 684 aa12.57□□□□□ -0.4
TSKU-204ENST00000533752 C11orf44Q8N8P7 122 aa12.57□□□□□ -0.4
TSKU-204ENST00000533752 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.57□□□□□ -0.4
TSKU-204ENST00000533752 OR4X2Q8NGF9 303 aa12.57□□□□□ -0.4
TSKU-204ENST00000533752 OR5H6Q8NGV6 325 aa12.57□□□□□ -0.4
TSKU-204ENST00000533752 KCTD12Q96CX2 325 aaKnown RBP12.57□□□□□ -0.4
TSKU-204ENST00000533752 RASL11BQ9BPW5 248 aa12.57□□□□□ -0.4
TSKU-204ENST00000533752 GINS4Q9BRT9 223 aa12.57□□□□□ -0.4
TSKU-204ENST00000533752 PARP12Q9H0J9 701 aaKnown RBP12.57□□□□□ -0.4
TSKU-204ENST00000533752 DIABLOQ9NR28 239 aa12.57□□□□□ -0.4
TSKU-204ENST00000533752 ZNF230Q9UIE0 474 aaPredicted RBP12.57□□□□□ -0.4
TSKU-204ENST00000533752 SH2D7A6NKC9 451 aaPredicted RBP12.56□□□□□ -0.4
TSKU-204ENST00000533752 IGHG2P01859 326 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 CTXN2P0C2S0 81 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 GSTT2P0CG29 244 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 GSTT2BP0CG30 244 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 MC5RP33032 325 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 TGFBR1P36897 503 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 RPS19P39019 145 aaKnown RBP12.56□□□□□ -0.4
TSKU-204ENST00000533752 MMDQ15546 238 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 UBE2NLQ5JXB2 153 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 SLC35E3Q7Z769 313 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 NDUFA11Q86Y39 141 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 Q8N9W7 124 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 OR5AU1Q8NGC0 362 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 CHPT1Q8WUD6 406 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 NUDCD2Q8WVJ2 157 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 SLC25A46Q96AG3 418 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 ABHD14BQ96IU4 210 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 ZNF251Q9BRH9 671 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 ABCG5Q9H222 651 aa12.56□□□□□ -0.4
TSKU-204ENST00000533752 RBBP9O75884 186 aa12.55□□□□□ -0.4
TSKU-204ENST00000533752 OPN1MWP04001 364 aa12.55□□□□□ -0.4
TSKU-204ENST00000533752 OPN1MW2P0DN77 364 aa12.55□□□□□ -0.4
TSKU-204ENST00000533752 OPN1MW3P0DN78 364 aa12.55□□□□□ -0.4
TSKU-204ENST00000533752 CD28P10747 220 aa12.55□□□□□ -0.4
TSKU-204ENST00000533752 ACTBP60709 375 aa12.55□□□□□ -0.4
TSKU-204ENST00000533752 RPL39P5Q59GN2 51 aa12.55□□□□□ -0.4
TSKU-204ENST00000533752 IGSF11Q5DX21 431 aa12.55□□□□□ -0.4
TSKU-204ENST00000533752 FAM71E2Q8N5Q1 922 aa12.55□□□□□ -0.4
TSKU-204ENST00000533752 MAFIPQ8WZ33 124 aa12.55□□□□□ -0.4
TSKU-204ENST00000533752 GON7Q9BXV9 100 aa12.55□□□□□ -0.4
TSKU-204ENST00000533752 PLSCR3Q9NRY6 295 aa12.55□□□□□ -0.4
TSKU-204ENST00000533752 TRAV18A0A075B6X5 111 aa12.54□□□□□ -0.4
TSKU-204ENST00000533752 PSMB11A5LHX3 300 aa12.54□□□□□ -0.4
TSKU-204ENST00000533752 AP4M1O00189 453 aa12.54□□□□□ -0.4
TSKU-204ENST00000533752 GABARAPO95166 117 aa12.54□□□□□ -0.4
TSKU-204ENST00000533752 TSPAN15O95858 294 aa12.54□□□□□ -0.4
TSKU-204ENST00000533752 TFAP2AP05549 437 aa12.54□□□□□ -0.4
TSKU-204ENST00000533752 SOX6P35712 828 aa12.54□□□□□ -0.4
TSKU-204ENST00000533752 NCS1P62166 190 aa12.54□□□□□ -0.4
TSKU-204ENST00000533752 SLC35B1P78383 322 aa12.54□□□□□ -0.4
TSKU-204ENST00000533752 FAM131AQ6UXB0 335 aa12.54□□□□□ -0.4
TSKU-204ENST00000533752 ANKRD13BQ86YJ7 626 aa12.54□□□□□ -0.4
TSKU-204ENST00000533752 OR5AN1Q8NGI8 311 aa12.54□□□□□ -0.4
TSKU-204ENST00000533752 S100A16Q96FQ6 103 aaKnown RBP12.54□□□□□ -0.4
TSKU-204ENST00000533752 ST6GALNAC5Q9BVH7 336 aa12.54□□□□□ -0.4
TSKU-204ENST00000533752 KIAA1456Q9P272 454 aa12.54□□□□□ -0.4
TSKU-204ENST00000533752 ELF5Q9UKW6 265 aaPredicted RBP12.54□□□□□ -0.4
TSKU-204ENST00000533752 GAB2Q9UQC2 676 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms