RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 MMDQ15546 238 aa10.47□□□□□ -0.73
RNF4-215ENST00000511843 BEAN1Q3B7T3 259 aa10.47□□□□□ -0.73
RNF4-215ENST00000511843 SAMD5Q5TGI4 173 aa10.47□□□□□ -0.73
RNF4-215ENST00000511843 FAM131AQ6UXB0 335 aa10.47□□□□□ -0.73
RNF4-215ENST00000511843 STPG2Q8N412 459 aa10.47□□□□□ -0.73
RNF4-215ENST00000511843 FAM71E2Q8N5Q1 922 aa10.47□□□□□ -0.73
RNF4-215ENST00000511843 CHPT1Q8WUD6 406 aa10.47□□□□□ -0.73
RNF4-215ENST00000511843 RAB3CQ96E17 227 aa10.47□□□□□ -0.73
RNF4-215ENST00000511843 RASL11BQ9BPW5 248 aa10.47□□□□□ -0.73
RNF4-215ENST00000511843 CHCHD6Q9BRQ6 235 aa10.47□□□□□ -0.73
RNF4-215ENST00000511843 C11orf54Q9H0W9 315 aaPredicted RBP10.47□□□□□ -0.73
RNF4-215ENST00000511843 RIMS4Q9H426 269 aaPredicted RBP10.47□□□□□ -0.73
RNF4-215ENST00000511843 ELF5Q9UKW6 265 aaPredicted RBP10.47□□□□□ -0.73
RNF4-215ENST00000511843 RNF150Q9ULK6 438 aa10.47□□□□□ -0.73
RNF4-215ENST00000511843 STUB1Q9UNE7 303 aa10.47□□□□□ -0.73
RNF4-215ENST00000511843 RAB27BO00194 218 aa10.46□□□□□ -0.73
RNF4-215ENST00000511843 MFNGO00587 321 aa10.46□□□□□ -0.73
RNF4-215ENST00000511843 HSPA12AO43301 675 aa10.46□□□□□ -0.73
RNF4-215ENST00000511843 FCGR3AP08637 254 aa10.46□□□□□ -0.73
RNF4-215ENST00000511843 SNRPBP14678 240 aaKnown RBP10.46□□□□□ -0.73
RNF4-215ENST00000511843 GALP22466 123 aa10.46□□□□□ -0.73
RNF4-215ENST00000511843 GADD45AP24522 165 aa10.46□□□□□ -0.73
RNF4-215ENST00000511843 FGF9P31371 208 aaPredicted RBP10.46□□□□□ -0.73
RNF4-215ENST00000511843 LINC00205P59089 165 aa10.46□□□□□ -0.73
RNF4-215ENST00000511843 ACTBP60709 375 aa10.46□□□□□ -0.73
RNF4-215ENST00000511843 LY6G6FQ5SQ64 297 aa10.46□□□□□ -0.73
RNF4-215ENST00000511843 FOXRED2Q8IWF2 684 aa10.46□□□□□ -0.73
RNF4-215ENST00000511843 OR10R2Q8NGX6 335 aa10.46□□□□□ -0.73
RNF4-215ENST00000511843 AGMATQ9BSE5 352 aa10.46□□□□□ -0.73
RNF4-215ENST00000511843 ATG5Q9H1Y0 275 aa10.46□□□□□ -0.73
RNF4-215ENST00000511843 ZNF230Q9UIE0 474 aaPredicted RBP10.46□□□□□ -0.73
RNF4-215ENST00000511843 SSR3Q9UNL2 185 aa10.46□□□□□ -0.73
RNF4-215ENST00000511843 NOTCH3Q9UM47 2321 aa10.46□□□□□ -0.74
RNF4-215ENST00000511843 TGP01266 2768 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 LOC100506127A0A0U1RQW1 187 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 TRDCB7Z8K6 153 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 AP4M1O00189 453 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 PF4P02776 101 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 CT45A6P0DMU7 189 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 CT45A5P0DMU8 189 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 CT45A7P0DMV0 189 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 IGLL1P15814 213 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 HIST1H1DP16402 221 aaKnown RBP10.45□□□□□ -0.74
RNF4-215ENST00000511843 CD33P20138 364 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 RAB6AP20340 208 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 ZBTB25P24278 435 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 SOX6P35712 828 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 MXD1Q05195 221 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 IGSF11Q5DX21 431 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 ETV3LQ6ZN32 361 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 DRAXINQ8NBI3 349 aaPredicted RBP10.45□□□□□ -0.74
RNF4-215ENST00000511843 OR8H1Q8NGG4 311 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 DAPK2Q9UIK4 370 aa10.45□□□□□ -0.74
RNF4-215ENST00000511843 NOTOA8MTQ0 251 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 NUDT19A8MXV4 375 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 RAB29O14966 203 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 BET1O15155 118 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 NBR2O15453 112 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 PROP1O75360 226 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 RPLP1P05386 114 aaKnown RBP10.44□□□□□ -0.74
RNF4-215ENST00000511843 GSTT2P0CG29 244 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 GSTT2BP0CG30 244 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 SDC2P34741 201 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 RPL23AP62750 156 aaKnown RBP10.44□□□□□ -0.74
RNF4-215ENST00000511843 SLC35B1P78383 322 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 MRPS15P82914 257 aaKnown RBP10.44□□□□□ -0.74
RNF4-215ENST00000511843 KCTD21Q4G0X4 260 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 C8orf86Q6ZUL3 223 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 KLHL30-AS1Q8NEE0 82 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 LGALS14Q8TCE9 139 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 DUX3Q96PT4 197 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 RDH8Q9NYR8 311 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 PIPOXQ9P0Z9 390 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 ZNF107Q9UII5 783 aaPredicted RBP10.44□□□□□ -0.74
RNF4-215ENST00000511843 MGAT4AQ9UM21 535 aa10.44□□□□□ -0.74
RNF4-215ENST00000511843 IGKV1D-8A0A087WSZ0 117 aa10.43□□□□□ -0.74
RNF4-215ENST00000511843 FABP7O15540 132 aa10.43□□□□□ -0.74
RNF4-215ENST00000511843 CD36P16671 472 aa10.43□□□□□ -0.74
RNF4-215ENST00000511843 TGFBR1P36897 503 aa10.43□□□□□ -0.74
RNF4-215ENST00000511843 ARFRP1Q13795 201 aa10.43□□□□□ -0.74
RNF4-215ENST00000511843 FAM71F2Q6NXP2 309 aa10.43□□□□□ -0.74
RNF4-215ENST00000511843 PHF21AQ96BD5 680 aa10.43□□□□□ -0.74
RNF4-215ENST00000511843 CENPOQ9BU64 300 aa10.43□□□□□ -0.74
RNF4-215ENST00000511843 WSB1Q9Y6I7 421 aa10.43□□□□□ -0.74
RNF4-215ENST00000511843 PRKDCP78527 4128 aaKnown RBP10.43□□□□□ -0.74
RNF4-215ENST00000511843 METTL21EPA6NDL7 271 aa10.42□□□□□ -0.74
RNF4-215ENST00000511843 G3V318 75 aa10.42□□□□□ -0.74
RNF4-215ENST00000511843 H0YJW9 148 aa10.42□□□□□ -0.74
RNF4-215ENST00000511843 H7C2Y5 167 aa10.42□□□□□ -0.74
RNF4-215ENST00000511843 ITGB1BP1O14713 200 aa10.42□□□□□ -0.74
RNF4-215ENST00000511843 ATP6V0E1O15342 81 aa10.42□□□□□ -0.74
RNF4-215ENST00000511843 RANBP1P43487 201 aa10.42□□□□□ -0.74
RNF4-215ENST00000511843 CFHR3Q02985 330 aa10.42□□□□□ -0.74
RNF4-215ENST00000511843 C5orf64Q2M2E5 130 aa10.42□□□□□ -0.74
RNF4-215ENST00000511843 KPRPQ5T749 579 aaPredicted RBP10.42□□□□□ -0.74
RNF4-215ENST00000511843 SFXN4Q6P4A7 337 aa10.42□□□□□ -0.74
RNF4-215ENST00000511843 TPRA1Q86W33 373 aa10.42□□□□□ -0.74
RNF4-215ENST00000511843 OR4A4PQ8NGN8 299 aa10.42□□□□□ -0.74
RNF4-215ENST00000511843 OR5H6Q8NGV6 325 aa10.42□□□□□ -0.74
RNF4-215ENST00000511843 EDARADDQ8WWZ3 215 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms