RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 BET1O15155 118 aa13.31□□□□□ -0.28
SNCA-209ENST00000506244 VSIG10L2P0DP72 767 aa13.31□□□□□ -0.28
SNCA-209ENST00000506244 BLCAPP62952 87 aa13.31□□□□□ -0.28
SNCA-209ENST00000506244 HERPUD1Q15011 391 aa13.31□□□□□ -0.28
SNCA-209ENST00000506244 ZNF260Q3ZCT1 412 aa13.31□□□□□ -0.28
SNCA-209ENST00000506244 ODF3L1Q8IXM7 274 aa13.31□□□□□ -0.28
SNCA-209ENST00000506244 EAF1Q96JC9 268 aaPredicted RBP13.31□□□□□ -0.28
SNCA-209ENST00000506244 GINS4Q9BRT9 223 aa13.31□□□□□ -0.28
SNCA-209ENST00000506244 MRPL20Q9BYC9 149 aaKnown RBP13.31□□□□□ -0.28
SNCA-209ENST00000506244 ABCG5Q9H222 651 aa13.31□□□□□ -0.28
SNCA-209ENST00000506244 SERTAD4Q9NUC0 356 aa13.31□□□□□ -0.28
SNCA-209ENST00000506244 RDH8Q9NYR8 311 aa13.31□□□□□ -0.28
SNCA-209ENST00000506244 ZNF230Q9UIE0 474 aaPredicted RBP13.31□□□□□ -0.28
SNCA-209ENST00000506244 ZNF221Q9UK13 617 aa13.31□□□□□ -0.28
SNCA-209ENST00000506244 IGKV1-6A0A0C4DH72 117 aa13.3□□□□□ -0.28
SNCA-209ENST00000506244 CTXN2P0C2S0 81 aa13.3□□□□□ -0.28
SNCA-209ENST00000506244 HNF4GQ14541 408 aa13.3□□□□□ -0.28
SNCA-209ENST00000506244 FBLN7Q53RD9 439 aa13.3□□□□□ -0.28
SNCA-209ENST00000506244 C5orf56Q8N8D9 126 aa13.3□□□□□ -0.28
SNCA-209ENST00000506244 SAMD12Q8N8I0 201 aa13.3□□□□□ -0.28
SNCA-209ENST00000506244 NUDCD2Q8WVJ2 157 aa13.3□□□□□ -0.28
SNCA-209ENST00000506244 ACOT12Q8WYK0 555 aa13.3□□□□□ -0.28
SNCA-209ENST00000506244 MAFIPQ8WZ33 124 aa13.3□□□□□ -0.28
SNCA-209ENST00000506244 AP3S1Q92572 193 aa13.3□□□□□ -0.28
SNCA-209ENST00000506244 S100A16Q96FQ6 103 aaKnown RBP13.3□□□□□ -0.28
SNCA-209ENST00000506244 TOLLIPQ9H0E2 274 aa13.3□□□□□ -0.28
SNCA-209ENST00000506244 C11orf54Q9H0W9 315 aaPredicted RBP13.3□□□□□ -0.28
SNCA-209ENST00000506244 TRAV18A0A075B6X5 111 aa13.29□□□□□ -0.28
SNCA-209ENST00000506244 TRBV6-7A0A0A0MS04 114 aa13.29□□□□□ -0.28
SNCA-209ENST00000506244 OR5H14A6NHG9 310 aa13.29□□□□□ -0.28
SNCA-209ENST00000506244 GSTT2P0CG29 244 aa13.29□□□□□ -0.28
SNCA-209ENST00000506244 GSTT2BP0CG30 244 aa13.29□□□□□ -0.28
SNCA-209ENST00000506244 GPR12P47775 334 aa13.29□□□□□ -0.28
SNCA-209ENST00000506244 OR3A3P47888 321 aa13.29□□□□□ -0.28
SNCA-209ENST00000506244 ALDH3B2P48448 385 aa13.29□□□□□ -0.28
SNCA-209ENST00000506244 RORCP51449 518 aa13.29□□□□□ -0.28
SNCA-209ENST00000506244 IGSF11Q5DX21 431 aa13.29□□□□□ -0.28
SNCA-209ENST00000506244 C9orf152Q5JTZ5 239 aa13.29□□□□□ -0.28
SNCA-209ENST00000506244 PRR31Q5SQ13 230 aa13.29□□□□□ -0.28
SNCA-209ENST00000506244 GPR107Q5VW38 600 aa13.29□□□□□ -0.28
SNCA-209ENST00000506244 Q8N6K4 173 aa13.29□□□□□ -0.28
SNCA-209ENST00000506244 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.29□□□□□ -0.28
SNCA-209ENST00000506244 NABP2Q9BQ15 211 aa13.29□□□□□ -0.28
SNCA-209ENST00000506244 AGMATQ9BSE5 352 aa13.29□□□□□ -0.28
SNCA-209ENST00000506244 PARP12Q9H0J9 701 aaKnown RBP13.29□□□□□ -0.28
SNCA-209ENST00000506244 NCBP2LA6PVI3 153 aaKnown RBP13.28□□□□□ -0.28
SNCA-209ENST00000506244 AMY1AP04745 511 aa13.28□□□□□ -0.28
SNCA-209ENST00000506244 AMY2AP04746 511 aa13.28□□□□□ -0.28
SNCA-209ENST00000506244 TFAP2AP05549 437 aa13.28□□□□□ -0.28
SNCA-209ENST00000506244 CBX5P45973 191 aa13.28□□□□□ -0.28
SNCA-209ENST00000506244 KRTAP10-3P60369 221 aa13.28□□□□□ -0.28
SNCA-209ENST00000506244 SRSF4Q08170 494 aaKnown RBP13.28□□□□□ -0.28
SNCA-209ENST00000506244 CTF1Q16619 201 aa13.28□□□□□ -0.28
SNCA-209ENST00000506244 ABHD14BQ96IU4 210 aa13.28□□□□□ -0.28
SNCA-209ENST00000506244 ST6GALNAC5Q9BVH7 336 aa13.28□□□□□ -0.28
SNCA-209ENST00000506244 WNT10AQ9GZT5 417 aa13.28□□□□□ -0.28
SNCA-209ENST00000506244 LIN7CQ9NUP9 197 aaKnown RBP13.28□□□□□ -0.28
SNCA-209ENST00000506244 ELF5Q9UKW6 265 aaPredicted RBP13.28□□□□□ -0.28
SNCA-209ENST00000506244 XRCC3O43542 346 aa13.27□□□□□ -0.29
SNCA-209ENST00000506244 NOL3O60936 208 aaKnown RBP13.27□□□□□ -0.29
SNCA-209ENST00000506244 FBXO24O75426 580 aa13.27□□□□□ -0.29
SNCA-209ENST00000506244 MC5RP33032 325 aa13.27□□□□□ -0.29
SNCA-209ENST00000506244 MMDQ15546 238 aa13.27□□□□□ -0.29
SNCA-209ENST00000506244 C2orf68Q2NKX9 166 aa13.27□□□□□ -0.29
SNCA-209ENST00000506244 TMEM95Q3KNT9 176 aa13.27□□□□□ -0.29
SNCA-209ENST00000506244 RPL39P5Q59GN2 51 aa13.27□□□□□ -0.29
SNCA-209ENST00000506244 TMEM69Q5SWH9 247 aa13.27□□□□□ -0.29
SNCA-209ENST00000506244 MZT2AQ6P582 158 aa13.27□□□□□ -0.29
SNCA-209ENST00000506244 CMTM3Q96MX0 182 aa13.27□□□□□ -0.29
SNCA-209ENST00000506244 BCL7BQ9BQE9 202 aa13.27□□□□□ -0.29
SNCA-209ENST00000506244 ZNF251Q9BRH9 671 aa13.27□□□□□ -0.29
SNCA-209ENST00000506244 AUNIPQ9H7T9 357 aa13.27□□□□□ -0.29
SNCA-209ENST00000506244 RBM7Q9Y580 266 aaKnown RBP13.27□□□□□ -0.29
SNCA-209ENST00000506244 ZNF736B4DX44 427 aaPredicted RBP13.26□□□□□ -0.29
SNCA-209ENST00000506244 KCNAB3O43448 404 aa13.26□□□□□ -0.29
SNCA-209ENST00000506244 SSX5O60225 188 aa13.26□□□□□ -0.29
SNCA-209ENST00000506244 ARPC4P59998 168 aa13.26□□□□□ -0.29
SNCA-209ENST00000506244 CNIH2Q6PI25 160 aa13.26□□□□□ -0.29
SNCA-209ENST00000506244 Q6ZS46 218 aa13.26□□□□□ -0.29
SNCA-209ENST00000506244 FOXRED2Q8IWF2 684 aa13.26□□□□□ -0.29
SNCA-209ENST00000506244 RAB2BQ8WUD1 216 aa13.26□□□□□ -0.29
SNCA-209ENST00000506244 RASL11BQ9BPW5 248 aa13.26□□□□□ -0.29
SNCA-209ENST00000506244 NAA50Q9GZZ1 169 aaKnown RBP13.26□□□□□ -0.29
SNCA-209ENST00000506244 OR2D2Q9H210 308 aa13.26□□□□□ -0.29
SNCA-209ENST00000506244 KIAA1456Q9P272 454 aa13.26□□□□□ -0.29
SNCA-209ENST00000506244 ANXA10Q9UJ72 324 aa13.26□□□□□ -0.29
SNCA-209ENST00000506244 RBBP9O75884 186 aa13.25□□□□□ -0.29
SNCA-209ENST00000506244 APOA1P02647 267 aa13.25□□□□□ -0.29
SNCA-209ENST00000506244 APOA2P02652 100 aa13.25□□□□□ -0.29
SNCA-209ENST00000506244 OR8U9P0C7N5 309 aa13.25□□□□□ -0.29
SNCA-209ENST00000506244 RPL5P46777 297 aaKnown RBP13.25□□□□□ -0.29
SNCA-209ENST00000506244 ACTBP60709 375 aa13.25□□□□□ -0.29
SNCA-209ENST00000506244 FAM131AQ6UXB0 335 aa13.25□□□□□ -0.29
SNCA-209ENST00000506244 SLC35E3Q7Z769 313 aa13.25□□□□□ -0.29
SNCA-209ENST00000506244 H1FOOQ8IZA3 346 aaPredicted RBP13.25□□□□□ -0.29
SNCA-209ENST00000506244 BEST4Q8NFU0 473 aa13.25□□□□□ -0.29
SNCA-209ENST00000506244 OR8U1Q8NH10 309 aa13.25□□□□□ -0.29
SNCA-209ENST00000506244 COMMD3Q9UBI1 195 aa13.25□□□□□ -0.29
SNCA-209ENST00000506244 RNF150Q9ULK6 438 aa13.25□□□□□ -0.29
SNCA-209ENST00000506244 WASHC3Q9Y3C0 194 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms