RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ATP6V0E1O15342 81 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 MAGEB3O15480 346 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 LANCL1O43813 399 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 ORC5O43913 435 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 AIREO43918 545 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 TPPPO94811 219 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 NDUFA3O95167 84 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 LALBAP00709 142 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 CSN3P07498 182 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 RPSAP08865 295 aaKnown RBP4.53□□□□□ -1.68
GYPB-204ENST00000504951 FCGR1AP12314 374 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 RCC1P18754 421 aaPredicted RBP4.53□□□□□ -1.68
GYPB-204ENST00000504951 SERPINA2P20848 420 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 LINC00310P59036 64 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 ADARB1P78563 741 aaKnown RBP4.53□□□□□ -1.68
GYPB-204ENST00000504951 GNMTQ14749 295 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 SMN1Q16637 294 aaKnown RBP4.53□□□□□ -1.68
GYPB-204ENST00000504951 C5orf64Q2M2E5 130 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 NHLRC3Q5JS37 347 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 ATAD3CQ5T2N8 411 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 DDI2Q5TDH0 399 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 MEDAGQ5VYS4 303 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 LIN54Q6MZP7 749 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 ZNF497Q6ZNH5 498 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 SLC25A48Q6ZT89 311 aaKnown RBP4.53□□□□□ -1.68
GYPB-204ENST00000504951 ODF3L1Q8IXM7 274 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 OR52I1Q8NGK6 324 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 OR1L1Q8NH94 360 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 APH1BQ8WW43 257 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 PYDC1Q8WXC3 89 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 FAM118AQ9NWS6 357 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 IL36GQ9NZH8 169 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 RNF150Q9ULK6 438 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 FBXO7Q9Y3I1 522 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 TRAV8-7A0A075B6U6 113 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 CXorf65A6NEN9 183 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 ZNF785A8K8V0 405 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 AIPO00170 330 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 HBZP02008 142 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 EGR2P11161 476 aaPredicted RBP4.52□□□□□ -1.69
GYPB-204ENST00000504951 HOXA5P20719 270 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 CD40LGP29965 261 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 BLVRBP30043 206 aaPredicted RBP4.52□□□□□ -1.69
GYPB-204ENST00000504951 ZNF93P35789 620 aaPredicted RBP4.52□□□□□ -1.69
GYPB-204ENST00000504951 ETV1P50549 477 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 NDPQ00604 133 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 LSAMPQ13449 338 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 TATDN3Q17R31 274 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 SLC22A6Q4U2R8 563 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 LY6G6FQ5SQ64 297 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 SYT6Q5T7P8 510 aaPredicted RBP4.52□□□□□ -1.69
GYPB-204ENST00000504951 OR2G6Q5TZ20 316 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 SIGIRRQ6IA17 410 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 Q6ZWC4 215 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 HAPLN4Q86UW8 402 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 GAPTQ8N292 157 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 PRR18Q8N4B5 295 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 CBR4Q8N4T8 237 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 OR4K15Q8NH41 348 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 RHOXF1Q8NHV9 184 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 NEK7Q8TDX7 302 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 ZNF184Q99676 751 aaPredicted RBP4.52□□□□□ -1.69
GYPB-204ENST00000504951 SLC29A1Q99808 456 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 RNF5Q99942 180 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 FAM110AQ9BQ89 295 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 MRPL20Q9BYC9 149 aaKnown RBP4.52□□□□□ -1.69
GYPB-204ENST00000504951 ANKRD60Q9BZ19 345 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 METTL9Q9H1A3 318 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 RETNQ9HD89 108 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 RAB9BQ9NP90 201 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 TMEM138Q9NPI0 162 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 SLC2A8Q9NY64 477 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 RCC2Q9P258 522 aaKnown RBP4.52□□□□□ -1.69
GYPB-204ENST00000504951 GNG12Q9UBI6 72 aa4.52□□□□□ -1.69
GYPB-204ENST00000504951 A0A0G2JLM5 398 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 A0A1W2PPK0 400 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 H3BS24 57 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 FCN1O00602 326 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 NBR2O15453 112 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 OGG1O15527 345 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 WBP4O75554 376 aaKnown RBP4.51□□□□□ -1.69
GYPB-204ENST00000504951 DEDDO75618 318 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 OR2A4O95047 310 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 FADS2O95864 444 aaKnown RBP4.51□□□□□ -1.69
GYPB-204ENST00000504951 CSTBP04080 98 aaKnown RBP4.51□□□□□ -1.69
GYPB-204ENST00000504951 TFAP2AP05549 437 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 IGFBP3P17936 291 aaPredicted RBP4.51□□□□□ -1.69
GYPB-204ENST00000504951 BDKRB2P30411 391 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 BMI1P35226 326 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 PPP1CCP36873 323 aaKnown RBP4.51□□□□□ -1.69
GYPB-204ENST00000504951 OR3A3P47888 321 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 ALDH3A2P51648 485 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 GBX2P52951 348 aaPredicted RBP4.51□□□□□ -1.69
GYPB-204ENST00000504951 ACTBP60709 375 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 RPS11P62280 158 aaKnown RBP eCLIP4.51□□□□□ -1.69
GYPB-204ENST00000504951 MMDQ15546 238 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 MPV17LQ2QL34 196 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 MORN2Q502X0 79 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 RAB12Q6IQ22 244 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 RPL22L1Q6P5R6 122 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms