RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 TMEM250H0YL14 139 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 PLPP3O14495 311 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 ST8SIA3O43173 380 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 SGCEO43556 437 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 NUPR1O60356 82 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 ZNF354AO60765 605 aaPredicted RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 NDUFB2O95178 105 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 PGA4P0DJD7 388 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 PGA3P0DJD8 388 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 PTHLHP12272 177 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 PRSS3P35030 304 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 RPL35P42766 123 aaKnown RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 ERVS71-1P61550 626 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 CSNK2A1P68400 391 aaPredicted RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 HLA-DRB3P79483 266 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 SLC3A1Q07837 685 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 HERPUD1Q15011 391 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 SHBQ15464 509 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 ACKR1Q16570 336 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 SERTAD4-AS1Q5TG53 156 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 NCR3LG1Q68D85 454 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 RASL11AQ6T310 242 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 WDR5BQ86VZ2 330 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 TGIF2LXQ8IUE1 241 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 SBSPONQ8IVN8 264 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 CDRT4Q8N9R6 151 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 CSNK2A3Q8NEV1 391 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR2AJ1Q8NGZ0 328 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR52N5Q8NH56 324 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR5AK3PQ8NH89 298 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 SECTM1Q8WVN6 248 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 TMEM106AQ96A25 262 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 EXOSC8Q96B26 276 aaKnown RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 ABHD6Q9BV23 337 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 RAB11FIP5Q9BXF6 653 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 SH3BGRL3Q9H299 93 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 KCNK15Q9H427 330 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 FAM60AQ9NP50 221 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 LSM4Q9Y4Z0 139 aaKnown RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 PUS1Q9Y606 427 aaKnown RBP eCLIP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 U3KQK5 164 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 ALMS1Q8TCU4 4167 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 TGIF2-C20orf24A0A0A6YYL0 155 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 C20orf202A1L168 122 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 FRG2CA6NGY1 282 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 C2orf70A6NJV1 201 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 C9JCJ5 164 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 GEMIN2O14893 280 aaKnown RBP2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 CCL25O15444 150 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR10H3O60404 316 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 LMX1BO60663 402 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 GAS8-AS1O95177 125 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR6A2O95222 327 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 IGKV1D-33P01593 117 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 IGKV1-33P01594 117 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 VPREB1P12018 145 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 NR2C1P13056 603 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 PTNP21246 168 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 CCNOP22674 350 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR3A2P47893 321 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 BLKP51451 505 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 CLDN18P56856 261 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 EIF5AP63241 154 aaKnown RBP2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 PSG7Q13046 419 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 BIKQ13323 160 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 ZNF235Q14590 738 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 TGIF1Q15583 401 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 GABRA6Q16445 453 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 ADAM5Q6NVV9 412 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 LANCL3Q6ZV70 420 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 ZNF440Q8IYI8 595 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 C1orf87Q8N0U7 546 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 TMEM123Q8N131 208 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 NFAM1Q8NET5 270 aaPredicted RBP2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR4C5Q8NGB2 326 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR9K2Q8NGE7 335 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR5D13Q8NGL4 314 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 SGMS2Q8NHU3 365 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 THAP6Q8TBB0 222 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 SPPL2AQ8TCT8 520 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 RBMXL1Q96E39 390 aaKnown RBP2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR2M4Q96R27 311 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 FNDC11Q9BVV2 318 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 CHMP1AQ9HD42 196 aaPredicted RBP2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 MCTS1Q9ULC4 181 aaKnown RBP2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 FOXA2Q9Y261 457 aaPredicted RBP2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 VPS13AQ96RL7 3174 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 TDRD6O60522 2096 aaKnown RBP2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 TRBV20OR9-2A0A075B6H5 130 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 IGKV1D-43A0A0B4J1Z2 117 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 SMIM27A0A1W2PRY6 76 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 TMEM8BA6NDV4 472 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 C21orf140B9A014 251 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 H3BQ15 152 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 CDC40O60508 579 aaKnown RBP eCLIP2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 RHOCP08134 193 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 STAG3L2P0CL84 134 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 AADACP22760 399 aa2.07□□□□□ -2.08
CDC42EP3-205ENST00000494083 APLNRP35414 380 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms