RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 SLC23A1Q9UHI7 598 aa12.73□□□□□ -0.37
COL7A1-203ENST00000459756 TRIM64CA6NLI5 447 aa12.72□□□□□ -0.37
COL7A1-203ENST00000459756 RAB29O14966 203 aa12.72□□□□□ -0.37
COL7A1-203ENST00000459756 RAB6AP20340 208 aa12.72□□□□□ -0.37
COL7A1-203ENST00000459756 ZBTB25P24278 435 aa12.72□□□□□ -0.37
COL7A1-203ENST00000459756 FGF9P31371 208 aaPredicted RBP12.72□□□□□ -0.37
COL7A1-203ENST00000459756 TGFBR1P36897 503 aa12.72□□□□□ -0.37
COL7A1-203ENST00000459756 OR3A3P47888 321 aa12.72□□□□□ -0.37
COL7A1-203ENST00000459756 F2RL1P55085 397 aa12.72□□□□□ -0.37
COL7A1-203ENST00000459756 MXD1Q05195 221 aa12.72□□□□□ -0.37
COL7A1-203ENST00000459756 BEAN1Q3B7T3 259 aa12.72□□□□□ -0.37
COL7A1-203ENST00000459756 FAM71E2Q8N5Q1 922 aa12.72□□□□□ -0.37
COL7A1-203ENST00000459756 RAB3CQ96E17 227 aa12.72□□□□□ -0.37
COL7A1-203ENST00000459756 CENPOQ9BU64 300 aa12.72□□□□□ -0.37
COL7A1-203ENST00000459756 GON7Q9BXV9 100 aa12.72□□□□□ -0.37
COL7A1-203ENST00000459756 LINC00527Q9UJ94 153 aa12.72□□□□□ -0.37
COL7A1-203ENST00000459756 NOTCH3Q9UM47 2321 aa12.72□□□□□ -0.37
COL7A1-203ENST00000459756 LINC01548A6NM66 108 aa12.71□□□□□ -0.37
COL7A1-203ENST00000459756 ST8SIA5O15466 376 aa12.71□□□□□ -0.37
COL7A1-203ENST00000459756 HSPA12AO43301 675 aa12.71□□□□□ -0.37
COL7A1-203ENST00000459756 AIREO43918 545 aa12.71□□□□□ -0.37
COL7A1-203ENST00000459756 PF4P02776 101 aa12.71□□□□□ -0.37
COL7A1-203ENST00000459756 SOX6P35712 828 aa12.71□□□□□ -0.37
COL7A1-203ENST00000459756 MRPS15P82914 257 aaKnown RBP12.71□□□□□ -0.37
COL7A1-203ENST00000459756 PLA2G7Q13093 441 aa12.71□□□□□ -0.37
COL7A1-203ENST00000459756 WFDC9Q8NEX5 89 aa12.71□□□□□ -0.37
COL7A1-203ENST00000459756 EDARADDQ8WWZ3 215 aa12.71□□□□□ -0.37
COL7A1-203ENST00000459756 PTX4Q96A99 478 aa12.71□□□□□ -0.37
COL7A1-203ENST00000459756 YIPF6Q96EC8 236 aa12.71□□□□□ -0.37
COL7A1-203ENST00000459756 KCTD7Q96MP8 289 aa12.71□□□□□ -0.37
COL7A1-203ENST00000459756 ZFP57Q9NU63 452 aa12.71□□□□□ -0.37
COL7A1-203ENST00000459756 PRKDCP78527 4128 aaKnown RBP12.7□□□□□ -0.38
COL7A1-203ENST00000459756 METTL21EPA6NDL7 271 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 TRDCB7Z8K6 153 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 SCTP09683 121 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 CD3GP09693 182 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 CLEC2LP0C7M8 214 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 CD33P20138 364 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 SLC6A1P30531 599 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 CEACAM6P40199 344 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 ACTBP60709 375 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 RPL23AP62750 156 aaKnown RBP12.7□□□□□ -0.38
COL7A1-203ENST00000459756 MMDQ15546 238 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 TIMM50Q3ZCQ8 353 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 OR10R2Q8NGX6 335 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 PHF21AQ96BD5 680 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 ZNF251Q9BRH9 671 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 AGMATQ9BSE5 352 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 KCNK7Q9Y2U2 307 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 TGP01266 2768 aa12.7□□□□□ -0.38
COL7A1-203ENST00000459756 A0A0B4J203 849 aa12.69□□□□□ -0.38
COL7A1-203ENST00000459756 SLC2A2P11168 524 aaPredicted RBP12.69□□□□□ -0.38
COL7A1-203ENST00000459756 SDC2P34741 201 aa12.69□□□□□ -0.38
COL7A1-203ENST00000459756 PNLIPRP3Q17RR3 467 aa12.69□□□□□ -0.38
COL7A1-203ENST00000459756 MOGAT2Q3SYC2 334 aa12.69□□□□□ -0.38
COL7A1-203ENST00000459756 OXLD1Q5BKU9 147 aa12.69□□□□□ -0.38
COL7A1-203ENST00000459756 TEX38Q6PEX7 206 aa12.69□□□□□ -0.38
COL7A1-203ENST00000459756 TPRA1Q86W33 373 aa12.69□□□□□ -0.38
COL7A1-203ENST00000459756 NR2C2APQ86WQ0 139 aa12.69□□□□□ -0.38
COL7A1-203ENST00000459756 OR13F1Q8NGS4 319 aa12.69□□□□□ -0.38
COL7A1-203ENST00000459756 RBMXL1Q96E39 390 aaKnown RBP12.69□□□□□ -0.38
COL7A1-203ENST00000459756 HSPB9Q9BQS6 159 aa12.69□□□□□ -0.38
COL7A1-203ENST00000459756 FUNDC2Q9BWH2 189 aa12.69□□□□□ -0.38
COL7A1-203ENST00000459756 PARP12Q9H0J9 701 aaKnown RBP12.69□□□□□ -0.38
COL7A1-203ENST00000459756 C11orf54Q9H0W9 315 aaPredicted RBP12.69□□□□□ -0.38
COL7A1-203ENST00000459756 OR1A1Q9P1Q5 309 aa12.69□□□□□ -0.38
COL7A1-203ENST00000459756 ZNF580Q9UK33 172 aa12.69□□□□□ -0.38
COL7A1-203ENST00000459756 OR5H14A6NHG9 310 aa12.68□□□□□ -0.38
COL7A1-203ENST00000459756 NOTOA8MTQ0 251 aa12.68□□□□□ -0.38
COL7A1-203ENST00000459756 RAB27BO00194 218 aa12.68□□□□□ -0.38
COL7A1-203ENST00000459756 NBR2O15453 112 aa12.68□□□□□ -0.38
COL7A1-203ENST00000459756 IGF1P05019 195 aa12.68□□□□□ -0.38
COL7A1-203ENST00000459756 HIST1H1DP16402 221 aaKnown RBP12.68□□□□□ -0.38
COL7A1-203ENST00000459756 MC5RP33032 325 aa12.68□□□□□ -0.38
COL7A1-203ENST00000459756 SERPINB10P48595 397 aa12.68□□□□□ -0.38
COL7A1-203ENST00000459756 KIR2DS1Q14954 304 aa12.68□□□□□ -0.38
COL7A1-203ENST00000459756 RPL39P5Q59GN2 51 aa12.68□□□□□ -0.38
COL7A1-203ENST00000459756 GPR141Q7Z602 305 aa12.68□□□□□ -0.38
COL7A1-203ENST00000459756 OR4A4PQ8NGN8 299 aa12.68□□□□□ -0.38
COL7A1-203ENST00000459756 ABHD14BQ96IU4 210 aa12.68□□□□□ -0.38
COL7A1-203ENST00000459756 RITA1Q96K30 269 aa12.68□□□□□ -0.38
COL7A1-203ENST00000459756 ZNF107Q9UII5 783 aaPredicted RBP12.68□□□□□ -0.38
COL7A1-203ENST00000459756 IGKV1-6A0A0C4DH72 117 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 MFNGO00587 321 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 FABP7O15540 132 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 HLA-DRB1P01911 266 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 FCGR3AP08637 254 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 CT45A6P0DMU7 189 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 CT45A5P0DMU8 189 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 CT45A7P0DMV0 189 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 GNB3P16520 340 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 VDAC1P21796 283 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 FOXE3Q13461 319 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 ARL6IP1Q15041 203 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 GPR107Q5VW38 600 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 FAM131AQ6UXB0 335 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 REC114Q7Z4M0 266 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 NPBQ8NG41 125 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 NAA50Q9GZZ1 169 aaKnown RBP12.67□□□□□ -0.38
COL7A1-203ENST00000459756 ATG5Q9H1Y0 275 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms