RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 Q6ZS49 121 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 KCTD9Q7L273 389 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 DTX2Q86UW9 622 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 SPAG16Q8N0X2 631 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 OR4D5Q8NGN0 318 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 CLDND2Q8NHS1 167 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 PLPPR1Q8TBJ4 325 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 SMG1Q96Q15 3661 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 IGHV4-61A0A0C4DH41 118 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 OR5B21A6NL26 309 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 TAAR5O14804 337 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 SIAH2O43255 324 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 MPIG6BO95866 241 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 GLP1RP43220 463 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 ARFRP1Q13795 201 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 SLC9A3R2Q15599 337 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 ARL6IP6Q8N6S5 226 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 INO80EQ8NBZ0 244 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 CASTOR1Q8WTX7 329 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 TUBA4BQ9H853 241 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 ATPIF1Q9UII2 106 aa6.18□□□□□ -1.42
CDC42BPA-208ENST00000442054 SIRPB1O00241 398 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 SDCBPO00560 298 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 DEGS1O15121 323 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 CST4P01036 141 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 IGLV1-44P01699 117 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 MBPP02686 304 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 SNCAP37840 140 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 WNT5AP41221 380 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 DEFA5Q01523 94 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 C10orf105Q8TEF2 133 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 PP6455Q8WZ26 134 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 ZNF665Q9H7R5 613 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 TRAV20A0A0B4J274 112 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 UBE2CO00762 179 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 SH2D1BO14796 132 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 MMP7P09237 267 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 OR8U9P0C7N5 309 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 SERPINA2P20848 420 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 C3orf36Q3SXR2 165 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 C6orf201Q7Z4U5 140 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 MYPOPQ86VE0 399 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 OR8U1Q8NH10 309 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 MAFIPQ8WZ33 124 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 ARL11Q969Q4 196 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 SPSB4Q96A44 273 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 MALSU1Q96EH3 234 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 PDCD10Q9BUL8 212 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 RSRP1Q9BUV0 290 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 TMEM231Q9H6L2 316 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 SIRT7Q9NRC8 400 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 COMMD9Q9P000 198 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 NOTCH3Q9UM47 2321 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 A0A1W2PPR1 153 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 RNASEK-C17orf49H0YIS7 233 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 CRTAPO75718 401 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 TSPAN9O75954 239 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 ACAA1P09110 424 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 TAS2R46P59540 309 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 CFAP161Q6P656 301 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 MBD6Q96DN6 1003 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 RAB9BQ9NP90 201 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 ZFP57Q9NU63 452 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 GNG12Q9UBI6 72 aa6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 SLC25A10Q9UBX3 287 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-208ENST00000442054 ARHGAP21Q5T5U3 1957 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 ZNF503-AS2A6NEH8 195 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 KIAA1324LA8MWY0 1029 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 K7EPK0 472 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 TCF21O43680 179 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 SFTA3P0C7M3 94 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 DTYMKP23919 212 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 FUT6P51993 359 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 UCP3P55916 312 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 COLCA1Q6ZS62 124 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 FAM71E2Q8N5Q1 922 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 GTF3AQ92664 365 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 FAM234AQ9H0X4 552 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 ZNF701Q9NV72 531 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 FBXL17Q9UF56 701 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 AK3Q9UIJ7 227 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 ANXA10Q9UJ72 324 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 RCL1Q9Y2P8 373 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 A0A1W2PPE3 182 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 OOEPA6NGQ2 149 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 H0YL77 283 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 SRSF7Q16629 238 aaKnown RBP eCLIP6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 GGNBP1Q5YKI7 109 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 CCDC54Q8NEL0 328 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 OR5H2Q8NGV7 314 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 TMEM158Q8WZ71 300 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 HIST1H2BAQ96A08 127 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 SULT4A1Q9BR01 284 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 METTL9Q9H1A3 318 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 FN1P02751 2386 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 ITPR1Q14643 2758 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 ITPR3Q14573 2671 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 PPIAL4CA0A0B4J2A2 164 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 K7N7A8 449 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 PHOX2AO14813 284 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms