RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 GYG2O15488 501 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 ATP8B1O43520 1251 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 SGCEO43556 437 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 SHOX2O60902 331 aaPredicted RBP3.4□□□□□ -1.87
USP54-206ENST00000433394 OR5AC1P0C628 307 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 OCMP0CE72 109 aaPredicted RBP3.4□□□□□ -1.87
USP54-206ENST00000433394 TEAD1P28347 426 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 SERPINB9P50453 376 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 CDKL4Q5MAI5 379 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 NXNL2Q5VZ03 156 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 FAM131AQ6UXB0 335 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 PLEKHG7Q6ZR37 379 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 PAGE2Q7Z2X7 111 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 SLC51BQ86UW2 128 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 CRLF3Q8IUI8 442 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 SELENOHQ8IZQ5 122 aaKnown RBP3.4□□□□□ -1.87
USP54-206ENST00000433394 BLIDQ8IZY5 108 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 LYPD1Q8N2G4 141 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 OR2AE1Q8NHA4 323 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 PHOSPHO2Q8TCD6 241 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 FAM45AQ8TCE6 357 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 DTD1Q8TEA8 209 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 C2orf15Q8WU43 125 aaKnown RBP3.4□□□□□ -1.87
USP54-206ENST00000433394 MRAP2Q96G30 205 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 ZNF514Q96K75 400 aaPredicted RBP3.4□□□□□ -1.87
USP54-206ENST00000433394 DERL2Q9GZP9 239 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 LINC00574Q9H8X3 128 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 BATF3Q9NR55 127 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 SNX24Q9Y343 169 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 TRAPPC1Q9Y5R8 145 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 LOC285556D6RIA3 1793 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 RBBP6Q7Z6E9 1792 aaKnown RBP3.4□□□□□ -1.87
USP54-206ENST00000433394 PARP14Q460N5 1801 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 PHIPQ8WWQ0 1821 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 TMEM131Q92545 1883 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 TRAV8-2A0A0B4J237 113 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 TOR1AO14656 332 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 ITGB1BP1O14713 200 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 NDUFS6O75380 124 aaKnown RBP3.39□□□□□ -1.87
USP54-206ENST00000433394 PTHLHP12272 177 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 PYCR1P32322 319 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 MAGEA2P43356 314 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 RBX1P62877 108 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 PMS2P3Q13401 168 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 TPBGQ13641 420 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 LINC00303Q3SY05 128 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 RBM48Q5RL73 367 aaKnown RBP3.39□□□□□ -1.87
USP54-206ENST00000433394 PRR9Q5T870 116 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 ZNF470Q6ECI4 717 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 FAM151BQ6UXP7 276 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 LINC00337Q8N6G1 96 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 LINC00301Q8NCQ3 95 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 ITLN2Q8WWU7 325 aaPredicted RBP3.39□□□□□ -1.87
USP54-206ENST00000433394 RORBQ92753 470 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 RBPMSQ93062 196 aaKnown RBP3.39□□□□□ -1.87
USP54-206ENST00000433394 C7orf50Q9BRJ6 194 aaKnown RBP3.39□□□□□ -1.87
USP54-206ENST00000433394 ULBP1Q9BZM6 244 aa3.39□□□□□ -1.87
USP54-206ENST00000433394 OTOFQ9HC10 1997 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 TRAV8-3A0A0A6YYJ7 113 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 H3BP45 60 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 LIN7AO14910 233 aaPredicted RBP3.38□□□□□ -1.87
USP54-206ENST00000433394 FABP1P07148 127 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 PFN1P07737 140 aaKnown RBP3.38□□□□□ -1.87
USP54-206ENST00000433394 RPS17P08708 135 aaKnown RBP3.38□□□□□ -1.87
USP54-206ENST00000433394 SLC35E2BP0CK96 405 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 CRABP2P29373 138 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 AQP5P55064 265 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 OR2B6P58173 313 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 RHOAP61586 193 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 PRDX1Q06830 199 aaKnown RBP3.38□□□□□ -1.87
USP54-206ENST00000433394 RAB31Q13636 194 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 NDUFA5Q16718 116 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 TBPL2Q6SJ96 375 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 DGAT2L6Q6ZPD8 337 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 FAM183BPQ6ZVS7 135 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 SLC13A5Q86YT5 568 aaPredicted RBP3.38□□□□□ -1.87
USP54-206ENST00000433394 PYDC1Q8WXC3 89 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 FAAP24Q9BTP7 215 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 TAPBPLQ9BX59 468 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 FAM107BQ9H098 131 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 RHOFQ9HBH0 211 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 URGCP-MRPS24S4R325 110 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 MYH7BA7E2Y1 1941 aa3.38□□□□□ -1.87
USP54-206ENST00000433394 KIF26AQ9ULI4 1882 aaPredicted RBP3.37□□□□□ -1.87
USP54-206ENST00000433394 A0A0G2JMZ2 1700 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 LRRN3E7EW58 273 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 K7EPK0 472 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 M0QXV9 152 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 SCN2BO60939 215 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 PSIP1O75475 530 aaKnown RBP3.37□□□□□ -1.87
USP54-206ENST00000433394 TNNC2P02585 160 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 KDELR2P33947 212 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 RCVRNP35243 200 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 MAGEA6P43360 314 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 AP3S2P59780 193 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 UBE2G2P60604 165 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 TMED2Q15363 201 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 TMEM241Q24JQ0 296 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 C3orf33Q6P1S2 294 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 TMEM144Q7Z5S9 345 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms