RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 IGKV1-6A0A0C4DH72 117 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 hCG_1809904A0A1W2PP81 198 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 A0A1W2PR64 198 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 A0A1W2PRV1 198 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 SYNGR2O43760 224 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 LY86O95711 162 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 ARG1P05089 322 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 IGKV1-13P0DP09 117 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 SELEP16581 610 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 CCNOP22674 350 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 OMGP23515 440 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 ITGA3P26006 1051 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 COL8A1P27658 744 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 CDX1P47902 265 aaPredicted RBP7.38□□□□□ -1.23
GABPB1-205ENST00000429662 UQCRFS1P47985 274 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 PAX9P55771 341 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 MRPL49Q13405 166 aaKnown RBP7.38□□□□□ -1.23
GABPB1-205ENST00000429662 ATP6V1FQ16864 119 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 XP32Q5T750 250 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 TUSC5Q8IXB3 177 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 TCTEX1D1Q8N7M0 179 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 ZNF610Q8N9Z0 462 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 THOC3Q96J01 351 aaKnown RBP7.38□□□□□ -1.23
GABPB1-205ENST00000429662 RTL8AQ9BWD3 113 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 FGF23Q9GZV9 251 aaPredicted RBP7.38□□□□□ -1.23
GABPB1-205ENST00000429662 OR51I2Q9H344 312 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 CALHM2Q9HA72 323 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 NIT2Q9NQR4 276 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 TAAR3PQ9P1P4 343 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 LIPGQ9Y5X9 500 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 ANKHD1Q8IWZ3 2542 aaKnown RBP7.38□□□□□ -1.23
GABPB1-205ENST00000429662 ABCA2Q9BZC7 2435 aa7.38□□□□□ -1.23
GABPB1-205ENST00000429662 TRAV24A0A0B4J272 114 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 PINLYPA6NC86 204 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 KIAA1324LA8MWY0 1029 aaPredicted RBP7.37□□□□□ -1.23
GABPB1-205ENST00000429662 SEC14L6B5MCN3 397 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 NEURL1O76050 574 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 CST7O76096 145 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 TMEM50AO95807 157 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 HLA-HP01893 362 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 MBP02144 154 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 DAOP14920 347 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 S100A2P29034 98 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 RPS10P46783 165 aaKnown RBP7.37□□□□□ -1.23
GABPB1-205ENST00000429662 ASCL1P50553 236 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 CCL20P78556 96 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 DLK1P80370 383 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 ZNF154Q13106 437 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 KIAA0141Q14154 515 aaPredicted RBP7.37□□□□□ -1.23
GABPB1-205ENST00000429662 HAGHQ16775 308 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 LRRC75BQ2VPJ9 315 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 FIP1L1Q6UN15 594 aaKnown RBP7.37□□□□□ -1.23
GABPB1-205ENST00000429662 RBMS3Q6XE24 437 aaKnown RBP7.37□□□□□ -1.23
GABPB1-205ENST00000429662 NUFIP2Q7Z417 695 aaKnown RBP7.37□□□□□ -1.23
GABPB1-205ENST00000429662 MRGPRGQ86SM5 289 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 THNSL2Q86YJ6 484 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 ODF3L1Q8IXM7 274 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 SPRY4Q9C004 299 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 TOLLIPQ9H0E2 274 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 GSN-AS1Q9NRJ2 163 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 PSENENQ9NZ42 101 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 ERRFI1Q9UJM3 462 aaPredicted RBP7.37□□□□□ -1.23
GABPB1-205ENST00000429662 KLF13Q9Y2Y9 288 aaPredicted RBP7.37□□□□□ -1.23
GABPB1-205ENST00000429662 WIPI2Q9Y4P8 454 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 KIAA1549Q9HCM3 1950 aa7.37□□□□□ -1.23
GABPB1-205ENST00000429662 A0A096LPE4 126 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 A0A1W2PPZ6 126 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 TMEM210A6NLX4 147 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 KLRC4-KLRK1H3BQV0 150 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 CLDN34H7C241 214 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 SH2D1BO14796 132 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 PPIHO43447 177 aaKnown RBP7.36□□□□□ -1.23
GABPB1-205ENST00000429662 SYNGR1O43759 233 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 SOX15O60248 233 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 CLDN1O95832 211 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 BCL2P10415 239 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 PSG2P11465 335 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 SFTPCP11686 197 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 NQO2P16083 231 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 TUBG1P23258 451 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 RND2P52198 227 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 OR2B8PP59922 312 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 PLGLB1Q02325 96 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 SRYQ05066 204 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 ELOBQ15370 118 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 GABRA6Q16445 453 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 TBC1D28Q2M2D7 210 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 ZNF674Q2M3X9 581 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 TMEM41BQ5BJD5 291 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 TMEM164Q5U3C3 297 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 SPINK14Q6IE38 97 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 Q6P435 159 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 ZNF497Q6ZNH5 498 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 C1orf87Q8N0U7 546 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 TMEM217Q8N7C4 229 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 CYB561D1Q8N8Q1 229 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 OR1K1Q8NGR3 316 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 FAM216AQ8WUB2 273 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 ABHD14AQ9BUJ0 271 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 TUBG2Q9NRH3 451 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms