RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 TRGV3P03979 118 aa14.02□□□□□ -0.17
UPK3BP1-201ENST00000428678 GLAP06280 429 aa14.02□□□□□ -0.17
UPK3BP1-201ENST00000428678 GSTP1P09211 210 aaKnown RBP14.02□□□□□ -0.17
UPK3BP1-201ENST00000428678 LFNGQ8NES3 379 aa14.02□□□□□ -0.17
UPK3BP1-201ENST00000428678 GALMQ96C23 342 aa14.02□□□□□ -0.17
UPK3BP1-201ENST00000428678 RDH12Q96NR8 316 aa14.02□□□□□ -0.17
UPK3BP1-201ENST00000428678 CLCC1Q96S66 551 aa14.02□□□□□ -0.17
UPK3BP1-201ENST00000428678 IFI27L2Q9H2X8 130 aa14.02□□□□□ -0.17
UPK3BP1-201ENST00000428678 TUBA4BQ9H853 241 aa14.02□□□□□ -0.17
UPK3BP1-201ENST00000428678 TRBV5-5A0A0J9YX44 114 aa14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 ST8SIA5O15466 376 aa14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 PDCD6O75340 191 aa14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 GPX5O75715 221 aa14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 PLECQ15149 4684 aaKnown RBP14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 AKIRIN2Q53H80 203 aa14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 LY6G6FQ5SQ64 297 aa14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 SIGIRRQ6IA17 410 aa14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 FAM71F2Q6NXP2 309 aa14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 GLDNQ6ZMI3 551 aaPredicted RBP14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 IL1F10Q8WWZ1 152 aa14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 GHSRQ92847 366 aa14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 Q96M66 194 aa14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 TMED9Q9BVK6 235 aa14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 SLA2Q9H6Q3 261 aa14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 FGF20Q9NP95 211 aaPredicted RBP14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 STEAP1Q9UHE8 339 aa14.01□□□□□ -0.17
UPK3BP1-201ENST00000428678 H7C2Y5 167 aa14□□□□□ -0.17
UPK3BP1-201ENST00000428678 OGG1O15527 345 aa14□□□□□ -0.17
UPK3BP1-201ENST00000428678 BAG2O95816 211 aa14□□□□□ -0.17
UPK3BP1-201ENST00000428678 FSTP19883 344 aa14□□□□□ -0.17
UPK3BP1-201ENST00000428678 ZP3P21754 424 aa14□□□□□ -0.17
UPK3BP1-201ENST00000428678 Q499Y3 187 aa14□□□□□ -0.17
UPK3BP1-201ENST00000428678 RPL39P5Q59GN2 51 aa14□□□□□ -0.17
UPK3BP1-201ENST00000428678 DMKNQ6E0U4 476 aaPredicted RBP14□□□□□ -0.17
UPK3BP1-201ENST00000428678 RANGRFQ9HD47 186 aaPredicted RBP14□□□□□ -0.17
UPK3BP1-201ENST00000428678 ZNF355PQ9NSJ1 428 aa14□□□□□ -0.17
UPK3BP1-201ENST00000428678 BABAM2Q9NXR7 383 aa14□□□□□ -0.17
UPK3BP1-201ENST00000428678 PIPOXQ9P0Z9 390 aa14□□□□□ -0.17
UPK3BP1-201ENST00000428678 ABRACLQ9P1F3 81 aa14□□□□□ -0.17
UPK3BP1-201ENST00000428678 C13orf42A0A1B0GVH6 325 aa13.99□□□□□ -0.17
UPK3BP1-201ENST00000428678 A0A1W2PPK0 400 aa13.99□□□□□ -0.17
UPK3BP1-201ENST00000428678 OR5H14A6NHG9 310 aa13.99□□□□□ -0.17
UPK3BP1-201ENST00000428678 H0Y980 276 aa13.99□□□□□ -0.17
UPK3BP1-201ENST00000428678 RAB29O14966 203 aa13.99□□□□□ -0.17
UPK3BP1-201ENST00000428678 TFAP2AP05549 437 aa13.99□□□□□ -0.17
UPK3BP1-201ENST00000428678 CT45A6P0DMU7 189 aa13.99□□□□□ -0.17
UPK3BP1-201ENST00000428678 CT45A5P0DMU8 189 aa13.99□□□□□ -0.17
UPK3BP1-201ENST00000428678 CT45A7P0DMV0 189 aa13.99□□□□□ -0.17
UPK3BP1-201ENST00000428678 SMN1Q16637 294 aaKnown RBP13.99□□□□□ -0.17
UPK3BP1-201ENST00000428678 GTSCR1Q86UQ5 136 aa13.99□□□□□ -0.17
UPK3BP1-201ENST00000428678 APH1BQ8WW43 257 aa13.99□□□□□ -0.17
UPK3BP1-201ENST00000428678 FAM46BQ96A09 425 aa13.99□□□□□ -0.17
UPK3BP1-201ENST00000428678 METTL1Q9UBP6 276 aaKnown RBP13.99□□□□□ -0.17
UPK3BP1-201ENST00000428678 WASHC3Q9Y3C0 194 aa13.99□□□□□ -0.17
UPK3BP1-201ENST00000428678 LRRC42Q9Y546 428 aa13.99□□□□□ -0.17
UPK3BP1-201ENST00000428678 LOC100130705A0A1B0GUX0 176 aa13.98□□□□□ -0.17
UPK3BP1-201ENST00000428678 ANKRD34BA5PLL1 514 aa13.98□□□□□ -0.17
UPK3BP1-201ENST00000428678 H0YJW9 148 aa13.98□□□□□ -0.17
UPK3BP1-201ENST00000428678 RBBP9O75884 186 aa13.98□□□□□ -0.17
UPK3BP1-201ENST00000428678 LALBAP00709 142 aa13.98□□□□□ -0.17
UPK3BP1-201ENST00000428678 CA2P00918 260 aa13.98□□□□□ -0.17
UPK3BP1-201ENST00000428678 DCKP27707 260 aa13.98□□□□□ -0.17
UPK3BP1-201ENST00000428678 MC5RP33032 325 aa13.98□□□□□ -0.17
UPK3BP1-201ENST00000428678 HMGN3Q15651 99 aa13.98□□□□□ -0.17
UPK3BP1-201ENST00000428678 YIF1BQ5BJH7 314 aa13.98□□□□□ -0.17
UPK3BP1-201ENST00000428678 ZNF562Q6V9R5 426 aa13.98□□□□□ -0.17
UPK3BP1-201ENST00000428678 ZFP41Q8N8Y5 198 aa13.98□□□□□ -0.17
UPK3BP1-201ENST00000428678 GRPEL2Q8TAA5 225 aa13.98□□□□□ -0.17
UPK3BP1-201ENST00000428678 OR14A2Q96R54 314 aa13.98□□□□□ -0.17
UPK3BP1-201ENST00000428678 RETNQ9HD89 108 aa13.98□□□□□ -0.17
UPK3BP1-201ENST00000428678 SLC23A1Q9UHI7 598 aa13.98□□□□□ -0.17
UPK3BP1-201ENST00000428678 TRBV5-7A0A0A0MS05 114 aa13.97□□□□□ -0.17
UPK3BP1-201ENST00000428678 ATP5HO75947 161 aa13.97□□□□□ -0.17
UPK3BP1-201ENST00000428678 SNRPBP14678 240 aaKnown RBP13.97□□□□□ -0.17
UPK3BP1-201ENST00000428678 MYL12AP19105 171 aa13.97□□□□□ -0.17
UPK3BP1-201ENST00000428678 CAPGP40121 348 aa13.97□□□□□ -0.17
UPK3BP1-201ENST00000428678 RPS11P62280 158 aaKnown RBP eCLIP13.97□□□□□ -0.17
UPK3BP1-201ENST00000428678 PSG5Q15238 335 aa13.97□□□□□ -0.17
UPK3BP1-201ENST00000428678 C6orf141Q5SZD1 244 aa13.97□□□□□ -0.17
UPK3BP1-201ENST00000428678 OR9G4Q8NGQ1 327 aa13.97□□□□□ -0.17
UPK3BP1-201ENST00000428678 IL17DQ8TAD2 202 aa13.97□□□□□ -0.17
UPK3BP1-201ENST00000428678 NEDD4LQ96PU5 975 aa13.97□□□□□ -0.17
UPK3BP1-201ENST00000428678 ALMS1Q8TCU4 4167 aa13.96□□□□□ -0.17
UPK3BP1-201ENST00000428678 H3BNX3 289 aa13.96□□□□□ -0.17
UPK3BP1-201ENST00000428678 SLC22A1O15245 554 aa13.96□□□□□ -0.17
UPK3BP1-201ENST00000428678 SYNJ2BPP57105 145 aa13.96□□□□□ -0.17
UPK3BP1-201ENST00000428678 KLF5Q13887 457 aaPredicted RBP13.96□□□□□ -0.17
UPK3BP1-201ENST00000428678 CDH26Q8IXH8 852 aa13.96□□□□□ -0.17
UPK3BP1-201ENST00000428678 POC5Q8NA72 575 aa13.96□□□□□ -0.17
UPK3BP1-201ENST00000428678 ABHD14BQ96IU4 210 aa13.96□□□□□ -0.17
UPK3BP1-201ENST00000428678 SULT4A1Q9BR01 284 aa13.96□□□□□ -0.17
UPK3BP1-201ENST00000428678 PARP12Q9H0J9 701 aaKnown RBP13.96□□□□□ -0.17
UPK3BP1-201ENST00000428678 CLEC2DQ9UHP7 191 aa13.96□□□□□ -0.17
UPK3BP1-201ENST00000428678 A0A0G2JLM5 398 aa13.95□□□□□ -0.18
UPK3BP1-201ENST00000428678 PNMA8CA0A1B0GUJ8 204 aa13.95□□□□□ -0.18
UPK3BP1-201ENST00000428678 WBP4O75554 376 aaKnown RBP13.95□□□□□ -0.18
UPK3BP1-201ENST00000428678 FXYD3Q14802 87 aa13.95□□□□□ -0.18
UPK3BP1-201ENST00000428678 LCN12Q6JVE5 192 aa13.95□□□□□ -0.18
UPK3BP1-201ENST00000428678 IL34Q6ZMJ4 242 aa13.95□□□□□ -0.18
UPK3BP1-201ENST00000428678 OR5T1Q8NG75 326 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms