RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 LRRC10Q5BKY1 277 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 NMSQ5H8A3 153 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 FAM216AQ8WUB2 273 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 PLEKHF2Q9H8W4 249 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 IDI2-AS1Q9NZ38 188 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 RALYQ9UKM9 306 aaKnown RBP21.15■□□□□ 0.98
CPNE1-205ENST00000401607 SPTBN1Q01082 2364 aaKnown RBP21.15■□□□□ 0.98
CPNE1-205ENST00000401607 RNF212BA8MTL3 300 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 KCNAB3O43448 404 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 LY6HO94772 140 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 OR2F2O95006 317 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 IGKV1-39P01597 117 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 IGKV1D-39P04432 117 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 SERPINE2P07093 398 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 RNF224P0DH78 156 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 ZNF16P17020 682 aaPredicted RBP21.15■□□□□ 0.98
CPNE1-205ENST00000401607 ZNF134P52741 427 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 RPL31P62899 125 aaKnown RBP21.15■□□□□ 0.98
CPNE1-205ENST00000401607 OR2F1Q13607 317 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 TEX261Q6UWH6 196 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 ACOT7LQ6ZUV0 252 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 KCNRGQ8N5I3 272 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 OR8H1Q8NGG4 311 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 OR1S1Q8NH92 325 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 TAS2R3Q9NYW6 316 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 LAMP3Q9UQV4 416 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 U3KQ87 197 aa21.15■□□□□ 0.98
CPNE1-205ENST00000401607 A6NNC1 897 aa21.14■□□□□ 0.97
CPNE1-205ENST00000401607 MMP23AO75900 390 aa21.14■□□□□ 0.97
CPNE1-205ENST00000401607 IGHV3-7P01780 117 aa21.14■□□□□ 0.97
CPNE1-205ENST00000401607 VDAC1P21796 283 aa21.14■□□□□ 0.97
CPNE1-205ENST00000401607 BTNL3Q6UXE8 466 aa21.14■□□□□ 0.97
CPNE1-205ENST00000401607 OR4D5Q8NGN0 318 aa21.14■□□□□ 0.97
CPNE1-205ENST00000401607 RRNAD1Q96FB5 475 aaKnown RBP21.14■□□□□ 0.97
CPNE1-205ENST00000401607 A0A0D9SG52 128 aa21.13■□□□□ 0.97
CPNE1-205ENST00000401607 SLC31A2O15432 143 aa21.13■□□□□ 0.97
CPNE1-205ENST00000401607 MBPP02686 304 aaPredicted RBP21.13■□□□□ 0.97
CPNE1-205ENST00000401607 PET100P0DJ07 73 aa21.13■□□□□ 0.97
CPNE1-205ENST00000401607 Q3ZCU0 254 aa21.13■□□□□ 0.97
CPNE1-205ENST00000401607 FOXRED2Q8IWF2 684 aa21.13■□□□□ 0.97
CPNE1-205ENST00000401607 NEU4Q8WWR8 484 aaPredicted RBP21.13■□□□□ 0.97
CPNE1-205ENST00000401607 LEAP2Q969E1 77 aa21.13■□□□□ 0.97
CPNE1-205ENST00000401607 IFI27L2Q9H2X8 130 aa21.13■□□□□ 0.97
CPNE1-205ENST00000401607 CLEC18AA5D8T8 446 aa21.13■□□□□ 0.97
CPNE1-205ENST00000401607 ITGB1BP1O14713 200 aa21.13■□□□□ 0.97
CPNE1-205ENST00000401607 PROP1O75360 226 aa21.13■□□□□ 0.97
CPNE1-205ENST00000401607 SCGB1D2O95969 90 aa21.13■□□□□ 0.97
CPNE1-205ENST00000401607 ESCO2Q56NI9 601 aa21.13■□□□□ 0.97
CPNE1-205ENST00000401607 PRAMEF5Q5TYX0 476 aa21.13■□□□□ 0.97
CPNE1-205ENST00000401607 TMEM200BQ69YZ2 307 aa21.13■□□□□ 0.97
CPNE1-205ENST00000401607 CLEC18CQ8NCF0 446 aa21.13■□□□□ 0.97
CPNE1-205ENST00000401607 UBTD1Q9HAC8 227 aa21.13■□□□□ 0.97
CPNE1-205ENST00000401607 HRNRQ86YZ3 2850 aaPredicted RBP21.12■□□□□ 0.97
CPNE1-205ENST00000401607 A0A0G2JRQ6 117 aa21.12■□□□□ 0.97
CPNE1-205ENST00000401607 DEDDO75618 318 aa21.12■□□□□ 0.97
CPNE1-205ENST00000401607 CFDP00746 253 aaPredicted RBP21.12■□□□□ 0.97
CPNE1-205ENST00000401607 TMEM30BQ3MIR4 351 aa21.12■□□□□ 0.97
CPNE1-205ENST00000401607 ZNF767PQ75MW2 155 aa21.12■□□□□ 0.97
CPNE1-205ENST00000401607 INO80EQ8NBZ0 244 aaPredicted RBP21.12■□□□□ 0.97
CPNE1-205ENST00000401607 H1FXQ92522 213 aaKnown RBP21.12■□□□□ 0.97
CPNE1-205ENST00000401607 LSM5Q9Y4Y9 91 aaKnown RBP21.12■□□□□ 0.97
CPNE1-205ENST00000401607 K7EPK0 472 aa21.11■□□□□ 0.97
CPNE1-205ENST00000401607 CCL3L1P16619 93 aa21.11■□□□□ 0.97
CPNE1-205ENST00000401607 GPR12P47775 334 aa21.11■□□□□ 0.97
CPNE1-205ENST00000401607 MRPS11P82912 194 aaKnown RBP21.11■□□□□ 0.97
CPNE1-205ENST00000401607 AVPI1Q5T686 147 aa21.11■□□□□ 0.97
CPNE1-205ENST00000401607 ZNF66Q6ZN08 573 aa21.11■□□□□ 0.97
CPNE1-205ENST00000401607 FAM71E2Q8N5Q1 922 aa21.11■□□□□ 0.97
CPNE1-205ENST00000401607 ZNF439Q8NDP4 499 aa21.11■□□□□ 0.97
CPNE1-205ENST00000401607 ZNF680Q8NEM1 530 aa21.11■□□□□ 0.97
CPNE1-205ENST00000401607 SPIN2AQ99865 258 aa21.11■□□□□ 0.97
CPNE1-205ENST00000401607 SPIN2BQ9BPZ2 258 aa21.11■□□□□ 0.97
CPNE1-205ENST00000401607 MSGN1A6NI15 193 aa21.1■□□□□ 0.97
CPNE1-205ENST00000401607 NFYBP25208 207 aa21.1■□□□□ 0.97
CPNE1-205ENST00000401607 BRWD1-AS2P59051 145 aa21.1■□□□□ 0.97
CPNE1-205ENST00000401607 CATR1Q13166 79 aa21.1■□□□□ 0.97
CPNE1-205ENST00000401607 CT45A1Q5HYN5 189 aa21.1■□□□□ 0.97
CPNE1-205ENST00000401607 CT45A3Q8NHU0 189 aa21.1■□□□□ 0.97
CPNE1-205ENST00000401607 ZNF714Q96N38 554 aa21.1■□□□□ 0.97
CPNE1-205ENST00000401607 ABHD14AQ9BUJ0 271 aa21.1■□□□□ 0.97
CPNE1-205ENST00000401607 GAL3ST2Q9H3Q3 398 aa21.1■□□□□ 0.97
CPNE1-205ENST00000401607 LPAR3Q9UBY5 353 aa21.1■□□□□ 0.97
CPNE1-205ENST00000401607 RPUSD1Q9UJJ7 312 aaKnown RBP21.1■□□□□ 0.97
CPNE1-205ENST00000401607 PIGBOS1A0A0B4J2F0 54 aa21.1■□□□□ 0.97
CPNE1-205ENST00000401607 LINC00473A8K010 186 aa21.1■□□□□ 0.97
CPNE1-205ENST00000401607 CLDN1O95832 211 aa21.1■□□□□ 0.97
CPNE1-205ENST00000401607 A0A1W2PPE3 182 aa21.09■□□□□ 0.97
CPNE1-205ENST00000401607 RAMP3O60896 148 aa21.09■□□□□ 0.97
CPNE1-205ENST00000401607 IGKV1-5P01602 117 aa21.09■□□□□ 0.97
CPNE1-205ENST00000401607 DAOP14920 347 aa21.09■□□□□ 0.97
CPNE1-205ENST00000401607 LINC00205P59089 165 aa21.09■□□□□ 0.97
CPNE1-205ENST00000401607 ERVFRD-1P60508 538 aa21.09■□□□□ 0.97
CPNE1-205ENST00000401607 OR10A7Q8NGE5 316 aa21.09■□□□□ 0.97
CPNE1-205ENST00000401607 TCTEX1D2Q8WW35 142 aa21.09■□□□□ 0.97
CPNE1-205ENST00000401607 GPR146Q96CH1 333 aa21.09■□□□□ 0.97
CPNE1-205ENST00000401607 HSD17B10Q99714 261 aaKnown RBP21.09■□□□□ 0.97
CPNE1-205ENST00000401607 C17orf98A8MV24 154 aa21.08■□□□□ 0.97
CPNE1-205ENST00000401607 LPAR6P43657 344 aa21.08■□□□□ 0.97
CPNE1-205ENST00000401607 RAB7AP51149 207 aa21.08■□□□□ 0.97
CPNE1-205ENST00000401607 SMCO1Q147U7 214 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms