RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 PYHIN1Q6K0P9 492 aa16.21■□□□□ 0.19
TRAF4-203ENST00000394925 CD200R1LQ6Q8B3 271 aa16.21■□□□□ 0.19
TRAF4-203ENST00000394925 UNQ5815/PRO19632Q6UWF5 114 aa16.21■□□□□ 0.19
TRAF4-203ENST00000394925 PPP1R27Q86WC6 154 aa16.21■□□□□ 0.19
TRAF4-203ENST00000394925 ANKRD13BQ86YJ7 626 aa16.21■□□□□ 0.19
TRAF4-203ENST00000394925 RNF150Q9ULK6 438 aa16.21■□□□□ 0.19
TRAF4-203ENST00000394925 GAB2Q9UQC2 676 aa16.21■□□□□ 0.19
TRAF4-203ENST00000394925 A8MZ25 164 aa16.2■□□□□ 0.18
TRAF4-203ENST00000394925 BAG2O95816 211 aa16.2■□□□□ 0.18
TRAF4-203ENST00000394925 IGLV1-51P01701 117 aa16.2■□□□□ 0.18
TRAF4-203ENST00000394925 FSTP19883 344 aa16.2■□□□□ 0.18
TRAF4-203ENST00000394925 DCKP27707 260 aa16.2■□□□□ 0.18
TRAF4-203ENST00000394925 VEGFCP49767 419 aa16.2■□□□□ 0.18
TRAF4-203ENST00000394925 RPS11P62280 158 aaKnown RBP eCLIP16.2■□□□□ 0.18
TRAF4-203ENST00000394925 LY6G6FQ5SQ64 297 aa16.2■□□□□ 0.18
TRAF4-203ENST00000394925 GLDNQ6ZMI3 551 aaPredicted RBP16.2■□□□□ 0.18
TRAF4-203ENST00000394925 ZFP41Q8N8Y5 198 aa16.2■□□□□ 0.18
TRAF4-203ENST00000394925 RHOVQ96L33 236 aa16.2■□□□□ 0.18
TRAF4-203ENST00000394925 CLCC1Q96S66 551 aa16.2■□□□□ 0.18
TRAF4-203ENST00000394925 SLC29A1Q99808 456 aa16.2■□□□□ 0.18
TRAF4-203ENST00000394925 IFI27L2Q9H2X8 130 aa16.2■□□□□ 0.18
TRAF4-203ENST00000394925 CNOT2Q9NZN8 540 aaKnown RBP16.2■□□□□ 0.18
TRAF4-203ENST00000394925 ST8SIA5O15466 376 aa16.19■□□□□ 0.18
TRAF4-203ENST00000394925 PDCD6O75340 191 aa16.19■□□□□ 0.18
TRAF4-203ENST00000394925 GSTP1P09211 210 aaKnown RBP16.19■□□□□ 0.18
TRAF4-203ENST00000394925 ARSBP15848 533 aa16.19■□□□□ 0.18
TRAF4-203ENST00000394925 RPL39P5Q59GN2 51 aa16.19■□□□□ 0.18
TRAF4-203ENST00000394925 YIF1BQ5BJH7 314 aa16.19■□□□□ 0.18
TRAF4-203ENST00000394925 DMKNQ6E0U4 476 aaPredicted RBP16.19■□□□□ 0.18
TRAF4-203ENST00000394925 LFNGQ8NES3 379 aa16.19■□□□□ 0.18
TRAF4-203ENST00000394925 FAM46BQ96A09 425 aa16.19■□□□□ 0.18
TRAF4-203ENST00000394925 OR14A2Q96R54 314 aa16.19■□□□□ 0.18
TRAF4-203ENST00000394925 SPATA25Q9BR10 227 aa16.19■□□□□ 0.18
TRAF4-203ENST00000394925 CLEC2DQ9UHP7 191 aa16.19■□□□□ 0.18
TRAF4-203ENST00000394925 TRBV5-7A0A0A0MS05 114 aa16.18■□□□□ 0.18
TRAF4-203ENST00000394925 ARPC1BO15143 372 aaKnown RBP16.18■□□□□ 0.18
TRAF4-203ENST00000394925 WBP4O75554 376 aaKnown RBP16.18■□□□□ 0.18
TRAF4-203ENST00000394925 CT45A6P0DMU7 189 aa16.18■□□□□ 0.18
TRAF4-203ENST00000394925 CT45A5P0DMU8 189 aa16.18■□□□□ 0.18
TRAF4-203ENST00000394925 CT45A7P0DMV0 189 aa16.18■□□□□ 0.18
TRAF4-203ENST00000394925 CD40LGP29965 261 aa16.18■□□□□ 0.18
TRAF4-203ENST00000394925 AKIRIN2Q53H80 203 aa16.18■□□□□ 0.18
TRAF4-203ENST00000394925 FAM71F2Q6NXP2 309 aa16.18■□□□□ 0.18
TRAF4-203ENST00000394925 IL1F10Q8WWZ1 152 aa16.18■□□□□ 0.18
TRAF4-203ENST00000394925 C9orf16Q9BUW7 83 aa16.18■□□□□ 0.18
TRAF4-203ENST00000394925 PIPOXQ9P0Z9 390 aa16.18■□□□□ 0.18
TRAF4-203ENST00000394925 STEAP1Q9UHE8 339 aa16.18■□□□□ 0.18
TRAF4-203ENST00000394925 LRRC42Q9Y546 428 aa16.18■□□□□ 0.18
TRAF4-203ENST00000394925 H7C2Y5 167 aa16.17■□□□□ 0.18
TRAF4-203ENST00000394925 RAB29O14966 203 aa16.17■□□□□ 0.18
TRAF4-203ENST00000394925 TRGV3P03979 118 aa16.17■□□□□ 0.18
TRAF4-203ENST00000394925 SNRPBP14678 240 aaKnown RBP16.17■□□□□ 0.18
TRAF4-203ENST00000394925 MYL12AP19105 171 aa16.17■□□□□ 0.18
TRAF4-203ENST00000394925 CAPGP40121 348 aa16.17■□□□□ 0.18
TRAF4-203ENST00000394925 HMGN3Q15651 99 aa16.17■□□□□ 0.18
TRAF4-203ENST00000394925 HAGHQ16775 308 aa16.17■□□□□ 0.18
TRAF4-203ENST00000394925 C6orf141Q5SZD1 244 aa16.17■□□□□ 0.18
TRAF4-203ENST00000394925 ZFP1Q6P2D0 407 aa16.17■□□□□ 0.18
TRAF4-203ENST00000394925 CDH26Q8IXH8 852 aa16.17■□□□□ 0.18
TRAF4-203ENST00000394925 PGLYRP3Q96LB9 341 aa16.17■□□□□ 0.18
TRAF4-203ENST00000394925 SLA2Q9H6Q3 261 aa16.17■□□□□ 0.18
TRAF4-203ENST00000394925 ABRACLQ9P1F3 81 aa16.17■□□□□ 0.18
TRAF4-203ENST00000394925 OR5H14A6NHG9 310 aa16.16■□□□□ 0.18
TRAF4-203ENST00000394925 H0YJW9 148 aa16.16■□□□□ 0.18
TRAF4-203ENST00000394925 SULT4A1Q9BR01 284 aa16.16■□□□□ 0.18
TRAF4-203ENST00000394925 ZNF355PQ9NSJ1 428 aa16.16■□□□□ 0.18
TRAF4-203ENST00000394925 METTL1Q9UBP6 276 aaKnown RBP16.16■□□□□ 0.18
TRAF4-203ENST00000394925 DIMT1Q9UNQ2 313 aaKnown RBP16.16■□□□□ 0.18
TRAF4-203ENST00000394925 EXOSC1Q9Y3B2 195 aaKnown RBP16.16■□□□□ 0.18
TRAF4-203ENST00000394925 WASHC3Q9Y3C0 194 aa16.16■□□□□ 0.18
TRAF4-203ENST00000394925 PNMA8CA0A1B0GUJ8 204 aa16.15■□□□□ 0.18
TRAF4-203ENST00000394925 CA2P00918 260 aa16.15■□□□□ 0.18
TRAF4-203ENST00000394925 TFAP2AP05549 437 aa16.15■□□□□ 0.18
TRAF4-203ENST00000394925 MC5RP33032 325 aa16.15■□□□□ 0.18
TRAF4-203ENST00000394925 ZNF562Q6V9R5 426 aa16.15■□□□□ 0.18
TRAF4-203ENST00000394925 ABHD14BQ96IU4 210 aa16.15■□□□□ 0.18
TRAF4-203ENST00000394925 NEDD4LQ96PU5 975 aa16.15■□□□□ 0.18
TRAF4-203ENST00000394925 FAAP24Q9BTP7 215 aa16.15■□□□□ 0.18
TRAF4-203ENST00000394925 PARP12Q9H0J9 701 aaKnown RBP16.15■□□□□ 0.18
TRAF4-203ENST00000394925 RANGRFQ9HD47 186 aaPredicted RBP16.15■□□□□ 0.18
TRAF4-203ENST00000394925 SLC23A1Q9UHI7 598 aa16.15■□□□□ 0.18
TRAF4-203ENST00000394925 IRGMA1A4Y4 181 aa16.14■□□□□ 0.17
TRAF4-203ENST00000394925 ANKRD34BA5PLL1 514 aa16.14■□□□□ 0.17
TRAF4-203ENST00000394925 RBBP9O75884 186 aa16.14■□□□□ 0.17
TRAF4-203ENST00000394925 IFNA6P05013 189 aa16.14■□□□□ 0.17
TRAF4-203ENST00000394925 ZP3P21754 424 aa16.14■□□□□ 0.17
TRAF4-203ENST00000394925 PSG5Q15238 335 aa16.14■□□□□ 0.17
TRAF4-203ENST00000394925 TUBA4BQ9H853 241 aa16.14■□□□□ 0.17
TRAF4-203ENST00000394925 C13orf42A0A1B0GVH6 325 aa16.13■□□□□ 0.17
TRAF4-203ENST00000394925 JTBO76095 146 aa16.13■□□□□ 0.17
TRAF4-203ENST00000394925 C6orf201Q7Z4U5 140 aa16.13■□□□□ 0.17
TRAF4-203ENST00000394925 OR5AN1Q8NGI8 311 aa16.13■□□□□ 0.17
TRAF4-203ENST00000394925 GRPEL2Q8TAA5 225 aa16.13■□□□□ 0.17
TRAF4-203ENST00000394925 DERL3Q96Q80 235 aa16.13■□□□□ 0.17
TRAF4-203ENST00000394925 TMED9Q9BVK6 235 aa16.13■□□□□ 0.17
TRAF4-203ENST00000394925 PLECQ15149 4684 aaKnown RBP16.12■□□□□ 0.17
TRAF4-203ENST00000394925 H0Y980 276 aa16.12■□□□□ 0.17
TRAF4-203ENST00000394925 SLC22A1O15245 554 aa16.12■□□□□ 0.17
TRAF4-203ENST00000394925 KLF5Q13887 457 aaPredicted RBP16.12■□□□□ 0.17
TRAF4-203ENST00000394925 OR10K2Q6IF99 312 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms