RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 SLC25A26Q70HW3 274 aa12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 SAP25Q8TEE9 199 aa12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 RAB1CQ92928 201 aa12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 FNDC4Q9H6D8 234 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 GLRX2Q9NS18 164 aa12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 KCNE3Q9Y6H6 103 aa12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 C14orf144Q96I85 54 aa12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 ABHD14AQ9BUJ0 271 aa12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 CTDSPLO15194 276 aa12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 HIST1H2BAQ96A08 127 aa12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 URB1O60287 2271 aaKnown RBP12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 TMEM272A0A1B0GTI8 110 aa12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 CDAP32320 146 aa12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 GALNSP34059 522 aa12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 EWSR1Q01844 656 aaKnown RBP eCLIP12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 HIST1H1AQ02539 215 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 OR10V1Q8NGI7 309 aa12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 THYN1Q9P016 225 aa12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 A0A1W2PP11 408 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 CHST1O43916 411 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 CTSDP07339 412 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 CXCL3P19876 107 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 PCMT1P22061 227 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 RASL10BQ96S79 203 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 RAB1BQ9H0U4 201 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 TRGV10A0A0A0MS01 117 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 FCGR3BO75015 233 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 SRIP30626 198 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 SMIM21Q3B7S5 101 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 LANCL1O43813 399 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 HOXA4Q00056 320 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 ZIC1Q15915 447 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 ASB5Q8WWX0 329 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 APOBEC3DQ96AK3 386 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 TXNDC17Q9BRA2 123 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 AURKAIP1Q9NWT8 199 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 A8MWV9 139 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 PRR33A8MZF0 331 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 COX6B1P14854 86 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 TIMM23BQ5SRD1 257 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 IBA57Q5T440 356 aaKnown RBP12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 OR52E5Q8NH55 327 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 SLC26A1Q9H2B4 701 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 MRPS18BQ9Y676 258 aaKnown RBP12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 ADRA2AP08913 450 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 LRRC10Q5BKY1 277 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 ONECUT1Q9UBC0 465 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 NEU3Q9UQ49 428 aa12.28□□□□□ -0.44
RAPGEF1-202ENST00000372190 TBL2Q9Y4P3 447 aaKnown RBP12.27□□□□□ -0.44
RAPGEF1-202ENST00000372190 TMEM189A5PLL7 270 aa12.27□□□□□ -0.44
RAPGEF1-202ENST00000372190 FAM219BQ5XKK7 198 aa12.27□□□□□ -0.44
RAPGEF1-202ENST00000372190 ZNF788Q6ZQV5 615 aa12.27□□□□□ -0.44
RAPGEF1-202ENST00000372190 FZR1Q9UM11 496 aa12.27□□□□□ -0.44
RAPGEF1-202ENST00000372190 B9D1Q9UPM9 204 aa12.27□□□□□ -0.44
RAPGEF1-202ENST00000372190 KCNMB2Q9Y691 235 aa12.27□□□□□ -0.44
RAPGEF1-202ENST00000372190 NDUFB3O43676 98 aa12.27□□□□□ -0.45
RAPGEF1-202ENST00000372190 KIR3DL2P43630 455 aa12.27□□□□□ -0.45
RAPGEF1-202ENST00000372190 SRSF6Q13247 344 aaKnown RBP12.27□□□□□ -0.45
RAPGEF1-202ENST00000372190 MICBQ29980 383 aa12.27□□□□□ -0.45
RAPGEF1-202ENST00000372190 MRGPRDQ8TDS7 321 aa12.27□□□□□ -0.45
RAPGEF1-202ENST00000372190 AQP10Q96PS8 301 aa12.27□□□□□ -0.45
RAPGEF1-202ENST00000372190 UBE2L6O14933 153 aa12.27□□□□□ -0.45
RAPGEF1-202ENST00000372190 NMBP08949 121 aa12.27□□□□□ -0.45
RAPGEF1-202ENST00000372190 CEACAM6P40199 344 aa12.27□□□□□ -0.45
RAPGEF1-202ENST00000372190 C3AR1Q16581 482 aa12.27□□□□□ -0.45
RAPGEF1-202ENST00000372190 C10orf113Q5VZT2 155 aa12.27□□□□□ -0.45
RAPGEF1-202ENST00000372190 MOB3BQ86TA1 216 aa12.27□□□□□ -0.45
RAPGEF1-202ENST00000372190 PP6455Q8WZ26 134 aa12.27□□□□□ -0.45
RAPGEF1-202ENST00000372190 NUP205Q92621 2012 aa12.27□□□□□ -0.45
RAPGEF1-202ENST00000372190 NRTNQ99748 197 aa12.27□□□□□ -0.45
RAPGEF1-202ENST00000372190 CTAG2O75638 210 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 ERRFI1Q9UJM3 462 aaPredicted RBP12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 TNFSF18Q9UNG2 199 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 SLC25A45Q8N413 288 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 GHITMQ9H3K2 345 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 PLXNA1Q9UIW2 1896 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 PARP14Q460N5 1801 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 NKX2-8O15522 239 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 PITX3O75364 302 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 ZNF414Q96IQ9 312 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 P2RX4Q99571 388 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 MMP25Q9NPA2 562 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 TMEM74BQ9NUR3 256 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 ESDP10768 282 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 PRDX2P32119 198 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 ZNF121P58317 390 aaPredicted RBP12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 C2orf83Q53S99 150 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 C9orf153Q5TBE3 101 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 SFTPA2Q8IWL1 248 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 C20orf196Q8IYI0 205 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 NPEPL1Q8NDH3 523 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 OR5R1Q8NH85 324 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 KCNE5Q9UJ90 142 aa12.26□□□□□ -0.45
RAPGEF1-202ENST00000372190 TRAV8-6A0A0B4J262 113 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 A0A1W2PRS3 328 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 DLEU1O43261 78 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 PLPP2O43688 288 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 SLC36A1Q7Z2H8 476 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 TGFAP01135 160 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 LINC00869P0C866 280 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms