RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 C1QL4Q86Z23 238 aa12.72□□□□□ -0.37
ATG4B-201ENST00000344376 ODF3L1Q8IXM7 274 aa12.72□□□□□ -0.37
ATG4B-201ENST00000344376 Q8N9W7 124 aa12.72□□□□□ -0.37
ATG4B-201ENST00000344376 EDARADDQ8WWZ3 215 aa12.72□□□□□ -0.37
ATG4B-201ENST00000344376 RAB3CQ96E17 227 aa12.72□□□□□ -0.37
ATG4B-201ENST00000344376 NOL4LQ96MY1 436 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-201ENST00000344376 GON7Q9BXV9 100 aa12.72□□□□□ -0.37
ATG4B-201ENST00000344376 MRPL20Q9BYC9 149 aaKnown RBP12.72□□□□□ -0.37
ATG4B-201ENST00000344376 Q9N2K0 584 aa12.72□□□□□ -0.37
ATG4B-201ENST00000344376 SLC23A1Q9UHI7 598 aa12.72□□□□□ -0.37
ATG4B-201ENST00000344376 SSR3Q9UNL2 185 aa12.72□□□□□ -0.37
ATG4B-201ENST00000344376 SHISA3A0PJX4 238 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 METTL21EPA6NDL7 271 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 H3BMQ9 156 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 RAB29O14966 203 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 ST8SIA5O15466 376 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 PF4P02776 101 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 RAB6AP20340 208 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 FGF9P31371 208 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-201ENST00000344376 OR3A3P47888 321 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 MMDQ15546 238 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 PLAC9Q5JTB6 97 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 GPR107Q5VW38 600 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 C10orf99Q6UWK7 81 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 Q6ZPA2 131 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 ZNF329Q86UD4 541 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 STPG2Q8N412 459 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 COMMD1Q8N668 190 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 IFI27L2Q9H2X8 130 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 GHITMQ9H3K2 345 aa12.71□□□□□ -0.37
ATG4B-201ENST00000344376 ITGB1BP1O14713 200 aa12.7□□□□□ -0.38
ATG4B-201ENST00000344376 SOX6P35712 828 aa12.7□□□□□ -0.38
ATG4B-201ENST00000344376 ANKRD13BQ86YJ7 626 aa12.7□□□□□ -0.38
ATG4B-201ENST00000344376 OR10R2Q8NGX6 335 aa12.7□□□□□ -0.38
ATG4B-201ENST00000344376 NABP2Q9BQ15 211 aa12.7□□□□□ -0.38
ATG4B-201ENST00000344376 ZNF251Q9BRH9 671 aa12.7□□□□□ -0.38
ATG4B-201ENST00000344376 PLSCR3Q9NRY6 295 aa12.7□□□□□ -0.38
ATG4B-201ENST00000344376 TXNL4BQ9NX01 149 aaKnown RBP12.7□□□□□ -0.38
ATG4B-201ENST00000344376 LINC00527Q9UJ94 153 aa12.7□□□□□ -0.38
ATG4B-201ENST00000344376 NOTCH1P46531 2555 aa12.7□□□□□ -0.38
ATG4B-201ENST00000344376 NOTOA8MTQ0 251 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 TRDCB7Z8K6 153 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 G3V4G9 280 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 CEACAM6P40199 344 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 PLA2G7Q13093 441 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 TPRA1Q86W33 373 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 FAM71E2Q8N5Q1 922 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 PTX4Q96A99 478 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 PHF21AQ96BD5 680 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 SCTP09683 121 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 CD33P20138 364 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 F2RL1P55085 397 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 ACTBP60709 375 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 KIR2DS1Q14954 304 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 ARL6IP1Q15041 203 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 SAMD5Q5TGI4 173 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 OR1A1Q9P1Q5 309 aa12.69□□□□□ -0.38
ATG4B-201ENST00000344376 A0A075B6Q4 140 aa12.68□□□□□ -0.38
ATG4B-201ENST00000344376 A0A0B4J203 849 aa12.68□□□□□ -0.38
ATG4B-201ENST00000344376 SMIM30A4D0T7 59 aa12.68□□□□□ -0.38
ATG4B-201ENST00000344376 GABARAPO95166 117 aa12.68□□□□□ -0.38
ATG4B-201ENST00000344376 HIST1H1DP16402 221 aaKnown RBP12.68□□□□□ -0.38
ATG4B-201ENST00000344376 TALDO1P37837 337 aa12.68□□□□□ -0.38
ATG4B-201ENST00000344376 SERPINB10P48595 397 aa12.68□□□□□ -0.38
ATG4B-201ENST00000344376 MOGAT2Q3SYC2 334 aa12.68□□□□□ -0.38
ATG4B-201ENST00000344376 TEX38Q6PEX7 206 aa12.68□□□□□ -0.38
ATG4B-201ENST00000344376 OR4A4PQ8NGN8 299 aa12.68□□□□□ -0.38
ATG4B-201ENST00000344376 KCTD7Q96MP8 289 aa12.68□□□□□ -0.38
ATG4B-201ENST00000344376 C11orf54Q9H0W9 315 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-201ENST00000344376 ZFP57Q9NU63 452 aa12.68□□□□□ -0.38
ATG4B-201ENST00000344376 KIAA1456Q9P272 454 aa12.68□□□□□ -0.38
ATG4B-201ENST00000344376 ZNF107Q9UII5 783 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-201ENST00000344376 OR5H14A6NHG9 310 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 NUDT19A8MXV4 375 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 RAB27BO00194 218 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 MFNGO00587 321 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 NBR2O15453 112 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 FABP7O15540 132 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 FCGR3AP08637 254 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 SLC2A2P11168 524 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-201ENST00000344376 GNB3P16520 340 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 VDAC1P21796 283 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 SLC6A1P30531 599 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 RPL23AP62750 156 aaKnown RBP12.67□□□□□ -0.38
ATG4B-201ENST00000344376 ARFRP1Q13795 201 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 PNLIPRP3Q17RR3 467 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 BEAN1Q3B7T3 259 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 RPL39P5Q59GN2 51 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 ABHD14BQ96IU4 210 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 FUNDC2Q9BWH2 189 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 PARP12Q9H0J9 701 aaKnown RBP12.67□□□□□ -0.38
ATG4B-201ENST00000344376 ATG5Q9H1Y0 275 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 ZNF221Q9UK13 617 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 KCNK7Q9Y2U2 307 aa12.67□□□□□ -0.38
ATG4B-201ENST00000344376 LINC01548A6NM66 108 aa12.66□□□□□ -0.38
ATG4B-201ENST00000344376 SCGNO76038 276 aa12.66□□□□□ -0.38
ATG4B-201ENST00000344376 OR5H8P0DN80 308 aa12.66□□□□□ -0.38
ATG4B-201ENST00000344376 MC5RP33032 325 aa12.66□□□□□ -0.38
ATG4B-201ENST00000344376 FAM131AQ6UXB0 335 aa12.66□□□□□ -0.38
ATG4B-201ENST00000344376 NR2C2APQ86WQ0 139 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms