RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 PTX4Q96A99 478 aa11.47□□□□□ -0.57
PPP1CA-201ENST00000312989 C11orf54Q9H0W9 315 aaPredicted RBP11.47□□□□□ -0.57
PPP1CA-201ENST00000312989 OR51E2Q9H255 320 aa11.47□□□□□ -0.57
PPP1CA-201ENST00000312989 CHMP1AQ9HD42 196 aaPredicted RBP11.47□□□□□ -0.57
PPP1CA-201ENST00000312989 ZNF107Q9UII5 783 aaPredicted RBP11.47□□□□□ -0.57
PPP1CA-201ENST00000312989 NCBP2LA6PVI3 153 aaKnown RBP11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 SERPINE3A8MV23 424 aa11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 RGS11O94810 467 aa11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 NDUFA3O95167 84 aa11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 RAB6AP20340 208 aa11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 ACTBP60709 375 aa11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 RNF152Q8N8N0 203 aa11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 OR10R2Q8NGX6 335 aa11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 SETD6Q8TBK2 473 aa11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 CHPT1Q8WUD6 406 aa11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 ABHD14BQ96IU4 210 aa11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 CMSS1Q9BQ75 279 aaKnown RBP11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 CABLES2Q9BTV7 478 aa11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 Q9H521 79 aa11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 RNF167Q9H6Y7 350 aa11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 ABRACLQ9P1F3 81 aa11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 ZNF580Q9UK33 172 aa11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 ELF5Q9UKW6 265 aaPredicted RBP11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 STUB1Q9UNE7 303 aa11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 RRP15Q9Y3B9 282 aaKnown RBP11.46□□□□□ -0.57
PPP1CA-201ENST00000312989 IGKV1D-8A0A087WSZ0 117 aa11.45□□□□□ -0.58
PPP1CA-201ENST00000312989 IGF1P05019 195 aa11.45□□□□□ -0.58
PPP1CA-201ENST00000312989 FCGR3AP08637 254 aa11.45□□□□□ -0.58
PPP1CA-201ENST00000312989 CD3GP09693 182 aa11.45□□□□□ -0.58
PPP1CA-201ENST00000312989 HIST1H1DP16402 221 aaKnown RBP11.45□□□□□ -0.58
PPP1CA-201ENST00000312989 GNB3P16520 340 aa11.45□□□□□ -0.58
PPP1CA-201ENST00000312989 MYL9P24844 172 aa11.45□□□□□ -0.58
PPP1CA-201ENST00000312989 RPL23AP62750 156 aaKnown RBP11.45□□□□□ -0.58
PPP1CA-201ENST00000312989 KCTD21Q4G0X4 260 aa11.45□□□□□ -0.58
PPP1CA-201ENST00000312989 LINC00482Q8N8I6 264 aa11.45□□□□□ -0.58
PPP1CA-201ENST00000312989 NPBQ8NG41 125 aa11.45□□□□□ -0.58
PPP1CA-201ENST00000312989 RAB3CQ96E17 227 aa11.45□□□□□ -0.58
PPP1CA-201ENST00000312989 C5orf30Q96GV9 206 aa11.45□□□□□ -0.58
PPP1CA-201ENST00000312989 PIPOXQ9P0Z9 390 aa11.45□□□□□ -0.58
PPP1CA-201ENST00000312989 IGHV7-81A0A0B4J1V7 117 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 NOTOA8MTQ0 251 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 TRDCB7Z8K6 153 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 H0YJW9 148 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 AP4M1O00189 453 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 RAB29O14966 203 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 LINC00205P59089 165 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 NDPQ00604 133 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 MMDQ15546 238 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 C19orf54Q5BKX5 351 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 FAM131AQ6UXB0 335 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 GLDNQ6ZMI3 551 aaPredicted RBP11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 FOXRED2Q8IWF2 684 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 OR5AN1Q8NGI8 311 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 MYOZ3Q8TDC0 251 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 MGAT4AQ9UM21 535 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 DNAH9Q9NYC9 4486 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 NOTCH3Q9UM47 2321 aa11.44□□□□□ -0.58
PPP1CA-201ENST00000312989 PLXNB1O43157 2135 aa11.43□□□□□ -0.58
PPP1CA-201ENST00000312989 HLA-DRB1P01911 266 aa11.43□□□□□ -0.58
PPP1CA-201ENST00000312989 PRB2P02812 416 aaPredicted RBP11.43□□□□□ -0.58
PPP1CA-201ENST00000312989 CLEC2LP0C7M8 214 aa11.43□□□□□ -0.58
PPP1CA-201ENST00000312989 IGLL1P15814 213 aa11.43□□□□□ -0.58
PPP1CA-201ENST00000312989 ZBTB25P24278 435 aa11.43□□□□□ -0.58
PPP1CA-201ENST00000312989 PPIFP30405 207 aaKnown RBP11.43□□□□□ -0.58
PPP1CA-201ENST00000312989 CEACAM6P40199 344 aa11.43□□□□□ -0.58
PPP1CA-201ENST00000312989 IGSF11Q5DX21 431 aa11.43□□□□□ -0.58
PPP1CA-201ENST00000312989 LCNL1Q6ZST4 164 aa11.43□□□□□ -0.58
PPP1CA-201ENST00000312989 ZNF383Q8NA42 475 aa11.43□□□□□ -0.58
PPP1CA-201ENST00000312989 MAFIPQ8WZ33 124 aa11.43□□□□□ -0.58
PPP1CA-201ENST00000312989 PHF21AQ96BD5 680 aa11.43□□□□□ -0.58
PPP1CA-201ENST00000312989 ZNF230Q9UIE0 474 aaPredicted RBP11.43□□□□□ -0.58
PPP1CA-201ENST00000312989 TRBV6-7A0A0A0MS04 114 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 NBR2O15453 112 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 FABP7O15540 132 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 IGHG4P01861 327 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 RPLP1P05386 114 aaKnown RBP11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 GSTT2P0CG29 244 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 GSTT2BP0CG30 244 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 GADD45AP24522 165 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 SOX6P35712 828 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 THBS3P49746 956 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 KIAA0141Q14154 515 aaPredicted RBP11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 C5orf64Q2M2E5 130 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 SFXN4Q6P4A7 337 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 Q6ZS49 121 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 C8orf86Q6ZUL3 223 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 MRPL41Q8IXM3 137 aaKnown RBP11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 COMMD1Q8N668 190 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 OR4A4PQ8NGN8 299 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 P2RX4Q99571 388 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 RASL11BQ9BPW5 248 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 CENPOQ9BU64 300 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 RDH8Q9NYR8 311 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 FBXO7Q9Y3I1 522 aa11.42□□□□□ -0.58
PPP1CA-201ENST00000312989 OR5H14A6NHG9 310 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 DIRAS3O95661 229 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 PF4V1P10720 104 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 PSMB8P28062 276 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 SDC2P34741 201 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms