RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 PPOXP50336 477 aa15.74■□□□□ 0.11
VBP1-201ENST00000286428 ID3Q02535 119 aa15.74■□□□□ 0.11
VBP1-201ENST00000286428 LRRC10Q5BKY1 277 aa15.74■□□□□ 0.11
VBP1-201ENST00000286428 GPHA2Q96T91 129 aa15.74■□□□□ 0.11
VBP1-201ENST00000286428 GAL3ST2Q9H3Q3 398 aa15.74■□□□□ 0.11
VBP1-201ENST00000286428 LINC00574Q9H8X3 128 aa15.74■□□□□ 0.11
VBP1-201ENST00000286428 PSG11Q9UQ72 335 aa15.74■□□□□ 0.11
VBP1-201ENST00000286428 LINC00312Q9Y6C7 94 aa15.74■□□□□ 0.11
VBP1-201ENST00000286428 NDUFB3O43676 98 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 GRNP28799 593 aaKnown RBP15.73■□□□□ 0.11
VBP1-201ENST00000286428 TFF3Q07654 80 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 SNTB1Q13884 538 aaKnown RBP15.73■□□□□ 0.11
VBP1-201ENST00000286428 ZCCHC24Q8N2G6 241 aaKnown RBP15.73■□□□□ 0.11
VBP1-201ENST00000286428 NEUROG1Q92886 237 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 RAB39BQ96DA2 213 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 AGMATQ9BSE5 352 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 DCTN5Q9BTE1 182 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 PARP12Q9H0J9 701 aaKnown RBP15.73■□□□□ 0.11
VBP1-201ENST00000286428 MED9Q9NWA0 146 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 KAAG1Q9UBP8 84 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 IGHV3-43A0A0B4J1X8 118 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 GAPDHP04406 335 aaKnown RBP15.73■□□□□ 0.11
VBP1-201ENST00000286428 IGHV3-43DP0DP04 118 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 NDUFB7P17568 137 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 LOXL3P58215 753 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.73■□□□□ 0.11
VBP1-201ENST00000286428 TCTEX1D2Q8WW35 142 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 GPR146Q96CH1 333 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 RAB1BQ9H0U4 201 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 SDHAF2Q9NX18 166 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 GFOD1Q9NXC2 390 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 COA4Q9NYJ1 87 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 IDI2-AS1Q9NZ38 188 aa15.73■□□□□ 0.11
VBP1-201ENST00000286428 RCL1Q9Y2P8 373 aaKnown RBP15.73■□□□□ 0.11
VBP1-201ENST00000286428 CHD3Q12873 2000 aaKnown RBP15.72■□□□□ 0.11
VBP1-201ENST00000286428 MSGN1A6NI15 193 aa15.72■□□□□ 0.11
VBP1-201ENST00000286428 DEFB108AA8MXU0 73 aa15.72■□□□□ 0.11
VBP1-201ENST00000286428 LPAR6P43657 344 aa15.72■□□□□ 0.11
VBP1-201ENST00000286428 EIF4EBP1Q13541 118 aaPredicted RBP15.72■□□□□ 0.11
VBP1-201ENST00000286428 LTC4SQ16873 150 aa15.72■□□□□ 0.11
VBP1-201ENST00000286428 C17orf58Q2M2W7 97 aa15.72■□□□□ 0.11
VBP1-201ENST00000286428 ZNF585BQ52M93 769 aa15.72■□□□□ 0.11
VBP1-201ENST00000286428 FAM216BQ8N7L0 139 aa15.72■□□□□ 0.11
VBP1-201ENST00000286428 PFDN2Q9UHV9 154 aa15.72■□□□□ 0.11
VBP1-201ENST00000286428 MMP24Q9Y5R2 645 aa15.72■□□□□ 0.11
VBP1-201ENST00000286428 AUP1Q9Y679 476 aa15.72■□□□□ 0.11
VBP1-201ENST00000286428 IGF2RP11717 2491 aa15.71■□□□□ 0.11
VBP1-201ENST00000286428 BORCS7-ASMTA0A0B4J1R7 106 aa15.71■□□□□ 0.11
VBP1-201ENST00000286428 FAM90A26D6RGX4 464 aa15.71■□□□□ 0.11
VBP1-201ENST00000286428 ST8SIA5O15466 376 aa15.71■□□□□ 0.11
VBP1-201ENST00000286428 KCNAB3O43448 404 aa15.71■□□□□ 0.11
VBP1-201ENST00000286428 PITX3O75364 302 aa15.71■□□□□ 0.11
VBP1-201ENST00000286428 PLAUP00749 431 aa15.71■□□□□ 0.11
VBP1-201ENST00000286428 KIR2DS2P43631 304 aa15.71■□□□□ 0.11
VBP1-201ENST00000286428 FGFRL1Q8N441 504 aa15.71■□□□□ 0.11
VBP1-201ENST00000286428 OR2C3Q8N628 320 aa15.71■□□□□ 0.11
VBP1-201ENST00000286428 RAB40CQ96S21 281 aa15.71■□□□□ 0.11
VBP1-201ENST00000286428 PRELID3BQ9Y3B1 194 aa15.71■□□□□ 0.11
VBP1-201ENST00000286428 TLN1Q9Y490 2541 aaKnown RBP15.71■□□□□ 0.1
VBP1-201ENST00000286428 ARHGDIBP52566 201 aa15.7■□□□□ 0.1
VBP1-201ENST00000286428 TMEM33P57088 247 aa15.7■□□□□ 0.1
VBP1-201ENST00000286428 Q3ZCU0 254 aa15.7■□□□□ 0.1
VBP1-201ENST00000286428 SPAG16Q8N0X2 631 aa15.7■□□□□ 0.1
VBP1-201ENST00000286428 ABHD14AQ9BUJ0 271 aa15.7■□□□□ 0.1
VBP1-201ENST00000286428 CYTL1Q9NRR1 136 aa15.7■□□□□ 0.1
VBP1-201ENST00000286428 CACFD1Q9UGQ2 172 aa15.7■□□□□ 0.1
VBP1-201ENST00000286428 NMBP08949 121 aa15.7■□□□□ 0.1
VBP1-201ENST00000286428 RRASP10301 218 aa15.7■□□□□ 0.1
VBP1-201ENST00000286428 SELLP14151 372 aa15.7■□□□□ 0.1
VBP1-201ENST00000286428 RPL23AP62750 156 aaKnown RBP15.7■□□□□ 0.1
VBP1-201ENST00000286428 RPL31P62899 125 aaKnown RBP15.7■□□□□ 0.1
VBP1-201ENST00000286428 DMBX1Q8NFW5 382 aa15.7■□□□□ 0.1
VBP1-201ENST00000286428 RNF141Q8WVD5 230 aa15.7■□□□□ 0.1
VBP1-201ENST00000286428 CITED4Q96RK1 184 aa15.7■□□□□ 0.1
VBP1-201ENST00000286428 CBLN4Q9NTU7 201 aa15.7■□□□□ 0.1
VBP1-201ENST00000286428 TNFRSF13BO14836 293 aaPredicted RBP15.69■□□□□ 0.1
VBP1-201ENST00000286428 RAB29O14966 203 aa15.69■□□□□ 0.1
VBP1-201ENST00000286428 MED6O75586 246 aa15.69■□□□□ 0.1
VBP1-201ENST00000286428 POLR2GP62487 172 aaKnown RBP eCLIP15.69■□□□□ 0.1
VBP1-201ENST00000286428 BAXQ07812 192 aa15.69■□□□□ 0.1
VBP1-201ENST00000286428 CDSNQ15517 529 aa15.69■□□□□ 0.1
VBP1-201ENST00000286428 TGIF2LYQ8IUE0 185 aa15.69■□□□□ 0.1
VBP1-201ENST00000286428 ADTRPQ96IZ2 230 aa15.69■□□□□ 0.1
VBP1-201ENST00000286428 LYRM2Q9NU23 88 aaPredicted RBP15.69■□□□□ 0.1
VBP1-201ENST00000286428 DCAF16Q9NXF7 216 aa15.69■□□□□ 0.1
VBP1-201ENST00000286428 SPTBN4Q9H254 2564 aa15.68■□□□□ 0.1
VBP1-201ENST00000286428 TOR1AO14656 332 aa15.68■□□□□ 0.1
VBP1-201ENST00000286428 GPR37O15354 613 aa15.68■□□□□ 0.1
VBP1-201ENST00000286428 SIAH2O43255 324 aa15.68■□□□□ 0.1
VBP1-201ENST00000286428 IGKV1-39P01597 117 aa15.68■□□□□ 0.1
VBP1-201ENST00000286428 IGKV1D-39P04432 117 aa15.68■□□□□ 0.1
VBP1-201ENST00000286428 DAOP14920 347 aa15.68■□□□□ 0.1
VBP1-201ENST00000286428 EPHA1P21709 976 aa15.68■□□□□ 0.1
VBP1-201ENST00000286428 LOXP28300 417 aaPredicted RBP15.68■□□□□ 0.1
VBP1-201ENST00000286428 CAV2P51636 162 aa15.68■□□□□ 0.1
VBP1-201ENST00000286428 CXorf66Q5JRM2 361 aaPredicted RBP15.68■□□□□ 0.1
VBP1-201ENST00000286428 COMMD7Q86VX2 200 aa15.68■□□□□ 0.1
VBP1-201ENST00000286428 UBAC2Q8NBM4 344 aa15.68■□□□□ 0.1
VBP1-201ENST00000286428 CACNG5Q9UF02 275 aa15.68■□□□□ 0.1
VBP1-201ENST00000286428 FBXL17Q9UF56 701 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms