RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Gdf1P20863 357 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Slc6a9P28571 692 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 PdgfbP31240 241 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Mc5rP41149 325 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Hist1h1bP43276 223 aaKnown RBP6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Egr3P43300 387 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Nkx2-1P50220 372 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Fgf17P63075 216 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Cnn1Q08091 297 aaKnown RBP6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Znf48Q3US17 591 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 BC147527Q3V185 167 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Foxf1Q61080 378 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Tgfbr1Q64729 503 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Serinc5Q8BHJ6 461 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 C1sbQ8CFG8 688 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Olfr530Q8VFE8 307 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Olfr283Q8VGU2 309 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Sfxn3Q91V61 321 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Tmem19Q91W52 336 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Yaf2Q99LW6 179 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 PecrQ99MZ7 303 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Rtl8bQ9D1F0 113 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Igkv10-94A0A075B5L1 115 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Fcgr4A0A0B4J1G0 249 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Igkv12-38A0A0G2JEI7 115 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Olfr1089A0A1L1SRK6 311 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Olfr1490A0A1L1SVH0 321 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 A0A286YDP4 300 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Aadacl4B1AVU5 407 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Vmn1r138D3YTY2 306 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Gm8693E9PW18 306 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Olfr750E9Q0Z1 331 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Olfr555E9Q547 315 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Gm4498K9J7G4 306 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Olfr1053L7MU59 313 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Vmn1r118L7N273 306 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 PrnpP04925 254 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Nudt10P0C027 164 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Nudt11P0C028 164 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Rpl27P61358 136 aaKnown RBP6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Ext1P97464 746 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Atp5iQ06185 71 aaKnown RBP6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Slc25a31Q3V132 320 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Trav3-3Q5R1C3 114 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Olfr967Q7TRA6 310 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Olfr876Q7TRE4 310 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Sh3bgrl2Q8BG73 107 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Lrtm2Q8BGX3 370 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Cldn17Q8BXA6 224 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Rab27bQ99P58 218 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Clec3aQ9EPW4 196 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Plekha3Q9ERS4 297 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Tex101Q9JMI7 250 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 DeddQ9Z1L3 318 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Gm45213A0A0U1RNZ6 101 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Gm20671F6TVX7 576 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Foxh1O88621 401 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 H2-DMaP28078 261 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Ier3P46694 153 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 FmodP50608 376 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Riiad1Q3KNY5 119 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Patz1Q5NBY9 687 aaKnown RBP6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Wdr34Q5U4F6 535 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 G6pc3Q6NSQ9 346 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Cfap161Q6P8Y0 303 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Gm5771Q792Y9 245 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Hamp2Q80T19 83 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Cstl1Q80Y72 140 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 SargQ8BI29 606 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Slc25a1Q8JZU2 311 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 IdnkQ8R0J8 184 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Vmn1r8Q8R2C2 303 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 SmagpQ99KC7 97 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Ddah2Q99LD8 285 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Nsa2Q9CR47 260 aaKnown RBP6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Rab32Q9CZE3 223 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Naa60Q9DBU2 242 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Clec1bQ9JL99 229 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Trex2Q9R1A9 236 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Kcne3Q9WTW2 103 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 HttP42859 3119 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Znf318Q99PP2 2237 aa6.6□□□□□ -1.35
Bdnf-204ENSMUST00000111044 P01809 118 aa6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 P04214 136 aa6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 NodalP43021 354 aa6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Fosl1P48755 273 aa6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Efnb2P52800 336 aa6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Trp53rkaQ5U452 244 aa6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Olfr145Q60882 310 aa6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Olfr32Q7TQZ0 308 aa6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Olfr399Q7TRX3 311 aa6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Mogat2Q80W94 334 aa6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Adipor2Q8BQS5 386 aa6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Sp110Q8BVK9 445 aa6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Ankrd33Q8BXP5 385 aa6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Znf385aQ8VD12 386 aaKnown RBP6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Olfr974Q8VH09 310 aa6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Vmn1r43Q8VIC9 329 aa6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Yipf2Q99LP8 312 aa6.59□□□□□ -1.35
Bdnf-204ENSMUST00000111044 Tp53rkQ99PW4 244 aa6.59□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms