RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 UBE2UQ5VVX9 321 aa10.41□□□□□ -0.74
ERBB2-220ENST00000584684 FAM71F2Q6NXP2 309 aa10.41□□□□□ -0.74
ERBB2-220ENST00000584684 OR52L2PQ8NGH6 319 aa10.41□□□□□ -0.74
ERBB2-220ENST00000584684 FAM3DQ96BQ1 224 aa10.41□□□□□ -0.74
ERBB2-220ENST00000584684 ABCG5Q9H222 651 aa10.41□□□□□ -0.74
ERBB2-220ENST00000584684 Q9H521 79 aa10.41□□□□□ -0.74
ERBB2-220ENST00000584684 C12orf4Q9NQ89 552 aa10.41□□□□□ -0.74
ERBB2-220ENST00000584684 PLSCR3Q9NRY6 295 aa10.41□□□□□ -0.74
ERBB2-220ENST00000584684 PLEKHJ1Q9NW61 149 aa10.41□□□□□ -0.74
ERBB2-220ENST00000584684 ZNF580Q9UK33 172 aa10.41□□□□□ -0.74
ERBB2-220ENST00000584684 MGAT4AQ9UM21 535 aa10.41□□□□□ -0.74
ERBB2-220ENST00000584684 AK6Q9Y3D8 172 aaKnown RBP10.41□□□□□ -0.74
ERBB2-220ENST00000584684 V9GY05 133 aa10.41□□□□□ -0.74
ERBB2-220ENST00000584684 TRDV1A0A1B0GX56 115 aa10.4□□□□□ -0.74
ERBB2-220ENST00000584684 TCRBV4S1A1TA0A5B7 111 aa10.4□□□□□ -0.74
ERBB2-220ENST00000584684 PSMB11A5LHX3 300 aa10.4□□□□□ -0.74
ERBB2-220ENST00000584684 SOCS1O15524 211 aa10.4□□□□□ -0.74
ERBB2-220ENST00000584684 DENRO43583 198 aaKnown RBP10.4□□□□□ -0.74
ERBB2-220ENST00000584684 ZNF833PQ6ZTB9 187 aa10.4□□□□□ -0.74
ERBB2-220ENST00000584684 SLC35E3Q7Z769 313 aa10.4□□□□□ -0.74
ERBB2-220ENST00000584684 FOXRED2Q8IWF2 684 aa10.4□□□□□ -0.74
ERBB2-220ENST00000584684 ODF3L1Q8IXM7 274 aa10.4□□□□□ -0.74
ERBB2-220ENST00000584684 FAM71E2Q8N5Q1 922 aa10.4□□□□□ -0.74
ERBB2-220ENST00000584684 COMMD1Q8N668 190 aa10.4□□□□□ -0.74
ERBB2-220ENST00000584684 Q8N9W7 124 aa10.4□□□□□ -0.74
ERBB2-220ENST00000584684 OR2AK2Q8NG84 335 aa10.4□□□□□ -0.74
ERBB2-220ENST00000584684 OR51D1Q8NGF3 324 aa10.4□□□□□ -0.74
ERBB2-220ENST00000584684 OR56B1Q8NGI3 324 aa10.4□□□□□ -0.74
ERBB2-220ENST00000584684 YTHDF1Q9BYJ9 559 aaKnown RBP10.4□□□□□ -0.74
ERBB2-220ENST00000584684 IFI27L2Q9H2X8 130 aa10.4□□□□□ -0.74
ERBB2-220ENST00000584684 STEAP1Q9UHE8 339 aa10.4□□□□□ -0.74
ERBB2-220ENST00000584684 SERPINE3A8MV23 424 aa10.39□□□□□ -0.75
ERBB2-220ENST00000584684 G3V4G9 280 aa10.39□□□□□ -0.75
ERBB2-220ENST00000584684 AP4M1O00189 453 aa10.39□□□□□ -0.75
ERBB2-220ENST00000584684 ITGB1BP1O14713 200 aa10.39□□□□□ -0.75
ERBB2-220ENST00000584684 PDCD5O14737 125 aa10.39□□□□□ -0.75
ERBB2-220ENST00000584684 SLC6A1P30531 599 aa10.39□□□□□ -0.75
ERBB2-220ENST00000584684 GPR12P47775 334 aa10.39□□□□□ -0.75
ERBB2-220ENST00000584684 C10orf99Q6UWK7 81 aa10.39□□□□□ -0.75
ERBB2-220ENST00000584684 C1QL4Q86Z23 238 aa10.39□□□□□ -0.75
ERBB2-220ENST00000584684 WFDC9Q8NEX5 89 aa10.39□□□□□ -0.75
ERBB2-220ENST00000584684 FCGR1BQ92637 280 aa10.39□□□□□ -0.75
ERBB2-220ENST00000584684 S1PR3Q99500 378 aa10.39□□□□□ -0.75
ERBB2-220ENST00000584684 CHMP1AQ9HD42 196 aaPredicted RBP10.39□□□□□ -0.75
ERBB2-220ENST00000584684 AK3Q9UIJ7 227 aa10.39□□□□□ -0.75
ERBB2-220ENST00000584684 SAA2-SAA4A0A096LPE2 208 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 A0A1W2PRX2 142 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 SHISA3A0PJX4 238 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 IFITM5A6NNB3 132 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 NCBP2LA6PVI3 153 aaKnown RBP10.38□□□□□ -0.75
ERBB2-220ENST00000584684 ZNF736B4DX44 427 aaPredicted RBP10.38□□□□□ -0.75
ERBB2-220ENST00000584684 SAA2P0DJI9 122 aaPredicted RBP10.38□□□□□ -0.75
ERBB2-220ENST00000584684 PF4V1P10720 104 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 MYL9P24844 172 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 TMEM50BP56557 158 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 CLDN12P56749 244 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 SLC35B1P78383 322 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 HLA-DRB3P79483 266 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 SPARTQ8N0X7 666 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 STPG2Q8N412 459 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 IL1F10Q8WWZ1 152 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 ARHGAP5-AS1Q96IT6 56 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 NOL4LQ96MY1 436 aaPredicted RBP10.38□□□□□ -0.75
ERBB2-220ENST00000584684 NABP2Q9BQ15 211 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 GON7Q9BXV9 100 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 MRPL20Q9BYC9 149 aaKnown RBP10.38□□□□□ -0.75
ERBB2-220ENST00000584684 GHITMQ9H3K2 345 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 SLC23A1Q9UHI7 598 aa10.38□□□□□ -0.75
ERBB2-220ENST00000584684 TMEM272A0A1B0GTI8 110 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 RRP9O43818 475 aaKnown RBP10.37□□□□□ -0.75
ERBB2-220ENST00000584684 RAB6AP20340 208 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 FGF9P31371 208 aaPredicted RBP10.37□□□□□ -0.75
ERBB2-220ENST00000584684 VEGFCP49767 419 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 RPL23AP62750 156 aaKnown RBP10.37□□□□□ -0.75
ERBB2-220ENST00000584684 C2orf76Q3KRA6 126 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 PLAC9Q5JTB6 97 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 REC114Q7Z4M0 266 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 C5orf24Q7Z6I8 188 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 RNF152Q8N8N0 203 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 PTX4Q96A99 478 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 ZNF251Q9BRH9 671 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 AGMATQ9BSE5 352 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 HDHD3Q9BSH5 251 aaPredicted RBP10.37□□□□□ -0.75
ERBB2-220ENST00000584684 PECRQ9BY49 303 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 Q9N2K0 584 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 ZFP57Q9NU63 452 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 PIPOXQ9P0Z9 390 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 RAB22AQ9UL26 194 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 DNAH3Q8TD57 4116 aa10.37□□□□□ -0.75
ERBB2-220ENST00000584684 RAB29O14966 203 aa10.36□□□□□ -0.75
ERBB2-220ENST00000584684 DIRAS3O95661 229 aa10.36□□□□□ -0.75
ERBB2-220ENST00000584684 PF4P02776 101 aa10.36□□□□□ -0.75
ERBB2-220ENST00000584684 IGF1P05019 195 aa10.36□□□□□ -0.75
ERBB2-220ENST00000584684 RAB3BP20337 219 aa10.36□□□□□ -0.75
ERBB2-220ENST00000584684 ZBTB25P24278 435 aa10.36□□□□□ -0.75
ERBB2-220ENST00000584684 SOX6P35712 828 aa10.36□□□□□ -0.75
ERBB2-220ENST00000584684 OR10A3P58181 314 aa10.36□□□□□ -0.75
ERBB2-220ENST00000584684 CFHR3Q02985 330 aa10.36□□□□□ -0.75
ERBB2-220ENST00000584684 MMDQ15546 238 aa10.36□□□□□ -0.75
ERBB2-220ENST00000584684 KHDC1LQ5JSQ8 128 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms