RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 CHST1O43916 411 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 GSTP1P09211 210 aaKnown RBP10.68□□□□□ -0.7
RPAIN-216ENST00000575599 CD3GP09693 182 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 HIST1H1DP16402 221 aaKnown RBP10.68□□□□□ -0.7
RPAIN-216ENST00000575599 GNB3P16520 340 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 GZMHP20718 246 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 PPP5CP53041 499 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 PNLIPRP3Q17RR3 467 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 SHISA2Q6UWI4 295 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 TMEM219Q86XT9 240 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 MFSD4AQ8N468 514 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 PRR18Q8N4B5 295 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 LINC01006Q8NI28 216 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 FCAMRQ8WWV6 532 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 ARHGAP5-AS1Q96IT6 56 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 PECRQ9BY49 303 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 MMP28Q9H239 520 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 AUNIPQ9H7T9 357 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 LINC00574Q9H8X3 128 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 RAB18Q9NP72 206 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 RNF114Q9Y508 228 aa10.68□□□□□ -0.7
RPAIN-216ENST00000575599 IGHV3-43A0A0B4J1X8 118 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 A0A1W2PPE3 182 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 SERPINE3A8MV23 424 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 C12orf77C9JDV5 145 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 C15orf65H3BRN8 121 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 J3QR06 171 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 IGHV3-43DP0DP04 118 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 CHATP28329 748 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 CEACAM3P40198 252 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 ARHGDIBP52566 201 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 RNASE12Q5GAN4 147 aaKnown RBP10.67□□□□□ -0.7
RPAIN-216ENST00000575599 C6orf183Q5T699 404 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 TPTE2P1Q5T6R2 138 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 TRIQKQ629K1 86 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 C6orf201Q7Z4U5 140 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 Q8N402 240 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 OR10A7Q8NGE5 316 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 OR4C13Q8NGP0 309 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 WFDC12Q8WWY7 111 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 BORCS5Q969J3 196 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 CREB3L1Q96BA8 519 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 SOSTQ9BQB4 213 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 SULT4A1Q9BR01 284 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 CHMP1AQ9HD42 196 aaPredicted RBP10.67□□□□□ -0.7
RPAIN-216ENST00000575599 HSF4Q9ULV5 492 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 PSG11Q9UQ72 335 aa10.67□□□□□ -0.7
RPAIN-216ENST00000575599 AMMECR1Q9Y4X0 333 aaPredicted RBP10.67□□□□□ -0.7
RPAIN-216ENST00000575599 A6NDX4 124 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 TMEM235A6NFC5 223 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 J3QRK9 145 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 SPINT2O43291 252 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 ORC5O43913 435 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 CA11O75493 328 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 HLA-DQB1P01920 261 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 GLAP06280 429 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 RCC1P18754 421 aaPredicted RBP10.66□□□□□ -0.7
RPAIN-216ENST00000575599 CD24P25063 80 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 DYNLT3P51808 116 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 TMEM50BP56557 158 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 SRSF4Q08170 494 aaKnown RBP10.66□□□□□ -0.7
RPAIN-216ENST00000575599 ZNF260Q3ZCT1 412 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 CCBE1Q6UXH8 406 aaPredicted RBP10.66□□□□□ -0.7
RPAIN-216ENST00000575599 OR10X1Q8NGY0 326 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 TOMM40LQ969M1 308 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 RPEQ96AT9 228 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 ABHD1Q96SE0 405 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 FAAP24Q9BTP7 215 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 CCDC32Q9BV29 185 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 NPFFR1Q9GZQ6 430 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 SRRQ9GZT4 340 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 SCPEP1Q9HB40 452 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 PITPNC1Q9UKF7 332 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 TENM1Q9UKZ4 2725 aa10.66□□□□□ -0.7
RPAIN-216ENST00000575599 GABARAPH6UMI1 98 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 SULT1C2O00338 296 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 MFNGO00587 321 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 CTDSPLO15194 276 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 RBBP9O75884 186 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 TSPAN9O75954 239 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 BRS3P32247 399 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 CBX5P45973 191 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 ZNF79Q15937 498 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 PLAC9Q5JTB6 97 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 HACD4Q5VWC8 232 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 FAM53AQ6NSI3 398 aaPredicted RBP10.65□□□□□ -0.7
RPAIN-216ENST00000575599 TRAT1Q6PIZ9 186 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 GAPTQ8N292 157 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 OR10V1Q8NGI7 309 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 OR1L1Q8NH94 360 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 MRPL30Q8TCC3 161 aaKnown RBP10.65□□□□□ -0.7
RPAIN-216ENST00000575599 CMSS1Q9BQ75 279 aaKnown RBP10.65□□□□□ -0.7
RPAIN-216ENST00000575599 THAP7Q9BT49 309 aaPredicted RBP10.65□□□□□ -0.7
RPAIN-216ENST00000575599 C16orf95Q9H693 158 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 TAF9BQ9HBM6 251 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 RAB9BQ9NP90 201 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 IFT46Q9NQC8 304 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 GFOD1Q9NXC2 390 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 KCNIP1Q9NZI2 227 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 GNG12Q9UBI6 72 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms