RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 G3V318 75 aa11.28□□□□□ -0.6
SPG7-205ENST00000561945 ATP6V0E1O15342 81 aa11.28□□□□□ -0.6
SPG7-205ENST00000561945 MYL12AP19105 171 aa11.28□□□□□ -0.6
SPG7-205ENST00000561945 RAB9AP51151 201 aa11.28□□□□□ -0.6
SPG7-205ENST00000561945 ACTBP60709 375 aa11.28□□□□□ -0.6
SPG7-205ENST00000561945 PLECQ15149 4684 aaKnown RBP11.28□□□□□ -0.6
SPG7-205ENST00000561945 FAM71F2Q6NXP2 309 aa11.28□□□□□ -0.6
SPG7-205ENST00000561945 ZNF429Q86V71 674 aa11.28□□□□□ -0.6
SPG7-205ENST00000561945 MRPL30Q8TCC3 161 aaKnown RBP11.28□□□□□ -0.6
SPG7-205ENST00000561945 TMEM80Q96HE8 168 aa11.28□□□□□ -0.6
SPG7-205ENST00000561945 DERL3Q96Q80 235 aa11.28□□□□□ -0.6
SPG7-205ENST00000561945 UQCC2Q9BRT2 126 aa11.28□□□□□ -0.6
SPG7-205ENST00000561945 TPSG1Q9NRR2 321 aa11.28□□□□□ -0.6
SPG7-205ENST00000561945 GHRLQ9UBU3 117 aa11.28□□□□□ -0.6
SPG7-205ENST00000561945 LRRC42Q9Y546 428 aa11.28□□□□□ -0.6
SPG7-205ENST00000561945 SMAD5-AS1Q9Y6J3 95 aa11.28□□□□□ -0.6
SPG7-205ENST00000561945 LYSTQ99698 3801 aa11.27□□□□□ -0.6
SPG7-205ENST00000561945 TRAV41A0A0B4J266 112 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 NBR2O15453 112 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 PDCD6O75340 191 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 SLC2A2P11168 524 aaPredicted RBP11.27□□□□□ -0.61
SPG7-205ENST00000561945 TAS2R43P59537 309 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 GNB1P62873 340 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 DOC2BQ14184 412 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 GNMTQ14749 295 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 LRRC36Q1X8D7 754 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 C5orf64Q2M2E5 130 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 TTC23Q5W5X9 447 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 AWAT2Q6E213 333 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 TMEM65Q6PI78 240 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 PRR18Q8N4B5 295 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 JAGN1Q8N5M9 183 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 NKAIN3Q8N8D7 197 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 CYYR1Q96J86 154 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 MRPL20Q9BYC9 149 aaKnown RBP11.27□□□□□ -0.61
SPG7-205ENST00000561945 ANKRD60Q9BZ19 345 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 SELENOIQ9C0D9 397 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 KCNIP1Q9NZI2 227 aa11.27□□□□□ -0.61
SPG7-205ENST00000561945 SAA2-SAA4A0A096LPE2 208 aa11.26□□□□□ -0.61
SPG7-205ENST00000561945 SAA2P0DJI9 122 aaPredicted RBP11.26□□□□□ -0.61
SPG7-205ENST00000561945 MYF6P23409 242 aa11.26□□□□□ -0.61
SPG7-205ENST00000561945 CNTFRP26992 372 aa11.26□□□□□ -0.61
SPG7-205ENST00000561945 BLVRBP30043 206 aaPredicted RBP11.26□□□□□ -0.61
SPG7-205ENST00000561945 MED21Q13503 144 aa11.26□□□□□ -0.61
SPG7-205ENST00000561945 HMGN3Q15651 99 aa11.26□□□□□ -0.61
SPG7-205ENST00000561945 LIN54Q6MZP7 749 aa11.26□□□□□ -0.61
SPG7-205ENST00000561945 TCTEX1D1Q8N7M0 179 aa11.26□□□□□ -0.61
SPG7-205ENST00000561945 OR52L2PQ8NGH6 319 aa11.26□□□□□ -0.61
SPG7-205ENST00000561945 ZNF251Q9BRH9 671 aa11.26□□□□□ -0.61
SPG7-205ENST00000561945 CST11Q9H112 138 aa11.26□□□□□ -0.61
SPG7-205ENST00000561945 IFI27L2Q9H2X8 130 aa11.26□□□□□ -0.61
SPG7-205ENST00000561945 VCXQ9H320 206 aa11.26□□□□□ -0.61
SPG7-205ENST00000561945 BANF2Q9H503 90 aa11.26□□□□□ -0.61
SPG7-205ENST00000561945 WSB1Q9Y6I7 421 aa11.26□□□□□ -0.61
SPG7-205ENST00000561945 CSMD3Q7Z407 3707 aa11.26□□□□□ -0.61
SPG7-205ENST00000561945 UBE2QL1A1L167 161 aa11.25□□□□□ -0.61
SPG7-205ENST00000561945 SOX15O60248 233 aa11.25□□□□□ -0.61
SPG7-205ENST00000561945 CRTAPO75718 401 aaPredicted RBP11.25□□□□□ -0.61
SPG7-205ENST00000561945 RGS11O94810 467 aa11.25□□□□□ -0.61
SPG7-205ENST00000561945 CD37P11049 281 aa11.25□□□□□ -0.61
SPG7-205ENST00000561945 PPP1CCP36873 323 aaKnown RBP11.25□□□□□ -0.61
SPG7-205ENST00000561945 CAPGP40121 348 aa11.25□□□□□ -0.61
SPG7-205ENST00000561945 ZNF660Q6AZW8 331 aaPredicted RBP11.25□□□□□ -0.61
SPG7-205ENST00000561945 ZNF880Q6PDB4 577 aa11.25□□□□□ -0.61
SPG7-205ENST00000561945 DHRSXQ8N5I4 330 aa11.25□□□□□ -0.61
SPG7-205ENST00000561945 ZFP41Q8N8Y5 198 aa11.25□□□□□ -0.61
SPG7-205ENST00000561945 DCUN1D4Q92564 292 aa11.25□□□□□ -0.61
SPG7-205ENST00000561945 THRSPQ92748 146 aa11.25□□□□□ -0.61
SPG7-205ENST00000561945 GGHQ92820 318 aa11.25□□□□□ -0.61
SPG7-205ENST00000561945 GALMQ96C23 342 aa11.25□□□□□ -0.61
SPG7-205ENST00000561945 ASCL2Q99929 193 aa11.25□□□□□ -0.61
SPG7-205ENST00000561945 TOLLIPQ9H0E2 274 aa11.25□□□□□ -0.61
SPG7-205ENST00000561945 FBXO7Q9Y3I1 522 aa11.25□□□□□ -0.61
SPG7-205ENST00000561945 SORL1Q92673 2214 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 A0A1W2PPK0 400 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 EFCAB10A6NFE3 127 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 ITGB1BP1O14713 200 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 OVOL1O14753 267 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 CASQ2O14958 399 aaPredicted RBP11.24□□□□□ -0.61
SPG7-205ENST00000561945 NAPSAO96009 420 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 MAS1P04201 325 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 UBBP0CG47 229 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 EGR2P11161 476 aaPredicted RBP11.24□□□□□ -0.61
SPG7-205ENST00000561945 NDPQ00604 133 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 ST3GAL4Q11206 333 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 CASC10Q5T4H9 136 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 FAM27D1Q5T7N8 215 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 ACSM6Q6P461 480 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 CD200R1LQ6Q8B3 271 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 C5orf24Q7Z6I8 188 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 SBSPONQ8IVN8 264 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 SETD9Q8NE22 299 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 CYGBQ8WWM9 190 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 GHITMQ9H3K2 345 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 ISYNA1Q9NPH2 558 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 PARP11Q9NR21 331 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 CNOT2Q9NZN8 540 aaKnown RBP11.24□□□□□ -0.61
SPG7-205ENST00000561945 NUBP2Q9Y5Y2 271 aa11.24□□□□□ -0.61
SPG7-205ENST00000561945 LINC01619G3V211 115 aa11.23□□□□□ -0.61
SPG7-205ENST00000561945 LGALS1P09382 135 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms