RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 LY86O95711 162 aa21.08■□□□□ 0.97
SNRPA1-215ENST00000561187 SAA2P0DJI9 122 aaPredicted RBP21.08■□□□□ 0.97
SNRPA1-215ENST00000561187 RCN1Q15293 331 aa21.08■□□□□ 0.97
SNRPA1-215ENST00000561187 TMEM65Q6PI78 240 aa21.08■□□□□ 0.97
SNRPA1-215ENST00000561187 C8orf59Q8N0T1 100 aaPredicted RBP21.08■□□□□ 0.97
SNRPA1-215ENST00000561187 IL1F10Q8WWZ1 152 aa21.08■□□□□ 0.97
SNRPA1-215ENST00000561187 ANKRD60Q9BZ19 345 aa21.08■□□□□ 0.97
SNRPA1-215ENST00000561187 CST11Q9H112 138 aa21.08■□□□□ 0.97
SNRPA1-215ENST00000561187 PSORS1C1Q9UIG5 152 aa21.08■□□□□ 0.97
SNRPA1-215ENST00000561187 NBR2O15453 112 aa21.07■□□□□ 0.96
SNRPA1-215ENST00000561187 ST8SIA5O15466 376 aa21.07■□□□□ 0.96
SNRPA1-215ENST00000561187 OR5H8P0DN80 308 aa21.07■□□□□ 0.96
SNRPA1-215ENST00000561187 BLVRBP30043 206 aaPredicted RBP21.07■□□□□ 0.96
SNRPA1-215ENST00000561187 GNB1P62873 340 aa21.07■□□□□ 0.96
SNRPA1-215ENST00000561187 FHL3Q13643 280 aa21.07■□□□□ 0.96
SNRPA1-215ENST00000561187 ECSCRQ19T08 205 aa21.07■□□□□ 0.96
SNRPA1-215ENST00000561187 CDH26Q8IXH8 852 aa21.07■□□□□ 0.96
SNRPA1-215ENST00000561187 SETD6Q8TBK2 473 aa21.07■□□□□ 0.96
SNRPA1-215ENST00000561187 NEDD4LQ96PU5 975 aa21.07■□□□□ 0.96
SNRPA1-215ENST00000561187 UQCC2Q9BRT2 126 aa21.07■□□□□ 0.96
SNRPA1-215ENST00000561187 OR51J1Q9H342 316 aa21.07■□□□□ 0.96
SNRPA1-215ENST00000561187 CNOT2Q9NZN8 540 aaKnown RBP21.07■□□□□ 0.96
SNRPA1-215ENST00000561187 SCOCQ9UIL1 159 aa21.07■□□□□ 0.96
SNRPA1-215ENST00000561187 IGHV7-81A0A0B4J1V7 117 aa21.06■□□□□ 0.96
SNRPA1-215ENST00000561187 MAPK3P27361 379 aaPredicted RBP21.06■□□□□ 0.96
SNRPA1-215ENST00000561187 GABPB1Q06547 395 aaPredicted RBP21.06■□□□□ 0.96
SNRPA1-215ENST00000561187 RBM48Q5RL73 367 aaKnown RBP21.06■□□□□ 0.96
SNRPA1-215ENST00000561187 C6orf141Q5SZD1 244 aa21.06■□□□□ 0.96
SNRPA1-215ENST00000561187 ASPHD1Q5U4P2 390 aa21.06■□□□□ 0.96
SNRPA1-215ENST00000561187 STEAP3Q658P3 488 aa21.06■□□□□ 0.96
SNRPA1-215ENST00000561187 C6orf201Q7Z4U5 140 aa21.06■□□□□ 0.96
SNRPA1-215ENST00000561187 PACRGLQ8N7B6 248 aa21.06■□□□□ 0.96
SNRPA1-215ENST00000561187 OR2AK2Q8NG84 335 aa21.06■□□□□ 0.96
SNRPA1-215ENST00000561187 CASTOR1Q8WTX7 329 aa21.06■□□□□ 0.96
SNRPA1-215ENST00000561187 NICN1Q9BSH3 213 aa21.06■□□□□ 0.96
SNRPA1-215ENST00000561187 FAAP24Q9BTP7 215 aa21.06■□□□□ 0.96
SNRPA1-215ENST00000561187 TMED9Q9BVK6 235 aa21.06■□□□□ 0.96
SNRPA1-215ENST00000561187 LSM4Q9Y4Z0 139 aaKnown RBP21.06■□□□□ 0.96
SNRPA1-215ENST00000561187 GLAP06280 429 aa21.05■□□□□ 0.96
SNRPA1-215ENST00000561187 CHATP28329 748 aa21.05■□□□□ 0.96
SNRPA1-215ENST00000561187 NDPQ00604 133 aa21.05■□□□□ 0.96
SNRPA1-215ENST00000561187 FAM131AQ6UXB0 335 aa21.05■□□□□ 0.96
SNRPA1-215ENST00000561187 GALMQ96C23 342 aa21.05■□□□□ 0.96
SNRPA1-215ENST00000561187 ALX4Q9H161 411 aaPredicted RBP21.05■□□□□ 0.96
SNRPA1-215ENST00000561187 CHMP1AQ9HD42 196 aaPredicted RBP21.05■□□□□ 0.96
SNRPA1-215ENST00000561187 A3GALT2U3KPV4 340 aa21.05■□□□□ 0.96
SNRPA1-215ENST00000561187 U3KQK5 164 aa21.05■□□□□ 0.96
SNRPA1-215ENST00000561187 TRAV41A0A0B4J266 112 aa21.04■□□□□ 0.96
SNRPA1-215ENST00000561187 YPEL1O60688 119 aa21.04■□□□□ 0.96
SNRPA1-215ENST00000561187 HLA-DRB1P01911 266 aa21.04■□□□□ 0.96
SNRPA1-215ENST00000561187 PPIFP30405 207 aaKnown RBP21.04■□□□□ 0.96
SNRPA1-215ENST00000561187 HMGN3Q15651 99 aa21.04■□□□□ 0.96
SNRPA1-215ENST00000561187 C5orf64Q2M2E5 130 aa21.04■□□□□ 0.96
SNRPA1-215ENST00000561187 GLDNQ6ZMI3 551 aaPredicted RBP21.04■□□□□ 0.96
SNRPA1-215ENST00000561187 ZNF833PQ6ZTB9 187 aa21.04■□□□□ 0.96
SNRPA1-215ENST00000561187 ZNF491Q8N8L2 437 aa21.04■□□□□ 0.96
SNRPA1-215ENST00000561187 OR1N2Q8NGR9 330 aa21.04■□□□□ 0.96
SNRPA1-215ENST00000561187 MYOZ3Q8TDC0 251 aa21.04■□□□□ 0.96
SNRPA1-215ENST00000561187 YPEL2Q96QA6 119 aa21.04■□□□□ 0.96
SNRPA1-215ENST00000561187 TMEM59Q9BXS4 323 aa21.04■□□□□ 0.96
SNRPA1-215ENST00000561187 PARP12Q9H0J9 701 aaKnown RBP21.04■□□□□ 0.96
SNRPA1-215ENST00000561187 IFI27L2Q9H2X8 130 aa21.04■□□□□ 0.96
SNRPA1-215ENST00000561187 KIAA1456Q9P272 454 aa21.04■□□□□ 0.96
SNRPA1-215ENST00000561187 RGS11O94810 467 aa21.03■□□□□ 0.96
SNRPA1-215ENST00000561187 HTD2P86397 168 aa21.03■□□□□ 0.96
SNRPA1-215ENST00000561187 ACSM3Q53FZ2 586 aa21.03■□□□□ 0.96
SNRPA1-215ENST00000561187 RPL39P5Q59GN2 51 aa21.03■□□□□ 0.96
SNRPA1-215ENST00000561187 NANOGP1Q8N7R0 232 aa21.03■□□□□ 0.96
SNRPA1-215ENST00000561187 VSIG4Q9Y279 399 aa21.03■□□□□ 0.96
SNRPA1-215ENST00000561187 ERGIC3Q9Y282 383 aa21.03■□□□□ 0.96
SNRPA1-215ENST00000561187 ZNF256Q9Y2P7 627 aaPredicted RBP21.03■□□□□ 0.96
SNRPA1-215ENST00000561187 FBXO7Q9Y3I1 522 aa21.03■□□□□ 0.96
SNRPA1-215ENST00000561187 HTR2CP28335 458 aa21.02■□□□□ 0.96
SNRPA1-215ENST00000561187 RPS27AP62979 156 aaKnown RBP21.02■□□□□ 0.96
SNRPA1-215ENST00000561187 ZNF616Q08AN1 781 aa21.02■□□□□ 0.96
SNRPA1-215ENST00000561187 KIAA0141Q14154 515 aaPredicted RBP21.02■□□□□ 0.96
SNRPA1-215ENST00000561187 LRRTM1Q86UE6 522 aa21.02■□□□□ 0.96
SNRPA1-215ENST00000561187 SVOPQ8N4V2 548 aa21.02■□□□□ 0.96
SNRPA1-215ENST00000561187 ABHD5Q8WTS1 349 aa21.02■□□□□ 0.96
SNRPA1-215ENST00000561187 UBE2E2Q96LR5 201 aa21.02■□□□□ 0.96
SNRPA1-215ENST00000561187 FBXL15Q9H469 300 aa21.02■□□□□ 0.96
SNRPA1-215ENST00000561187 C8orf4Q9NR00 106 aa21.02■□□□□ 0.96
SNRPA1-215ENST00000561187 ABRACLQ9P1F3 81 aa21.02■□□□□ 0.96
SNRPA1-215ENST00000561187 GHRLQ9UBU3 117 aa21.02■□□□□ 0.96
SNRPA1-215ENST00000561187 ZNF580Q9UK33 172 aa21.02■□□□□ 0.96
SNRPA1-215ENST00000561187 HUWE1Q7Z6Z7 4374 aaKnown RBP21.01■□□□□ 0.95
SNRPA1-215ENST00000561187 A0A1W2PN81 502 aa21.01■□□□□ 0.95
SNRPA1-215ENST00000561187 I3L521 148 aa21.01■□□□□ 0.95
SNRPA1-215ENST00000561187 CD1AP06126 327 aa21.01■□□□□ 0.95
SNRPA1-215ENST00000561187 OR8U8P0C7N1 319 aa21.01■□□□□ 0.95
SNRPA1-215ENST00000561187 CHRNA7P36544 502 aa21.01■□□□□ 0.95
SNRPA1-215ENST00000561187 UNC119Q13432 240 aa21.01■□□□□ 0.95
SNRPA1-215ENST00000561187 PLGLAQ15195 96 aa21.01■□□□□ 0.95
SNRPA1-215ENST00000561187 LIN54Q6MZP7 749 aa21.01■□□□□ 0.95
SNRPA1-215ENST00000561187 ZNF554Q86TJ5 538 aa21.01■□□□□ 0.95
SNRPA1-215ENST00000561187 THRSPQ92748 146 aa21.01■□□□□ 0.95
SNRPA1-215ENST00000561187 ISYNA1Q9NPH2 558 aa21.01■□□□□ 0.95
SNRPA1-215ENST00000561187 STEAP1Q9UHE8 339 aa21.01■□□□□ 0.95
SNRPA1-215ENST00000561187 IGLV1-40P01703 118 aa21■□□□□ 0.95
SNRPA1-215ENST00000561187 RAB9AP51151 201 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms